Desulfofundulus luciae (DSM 12396, SMCC W644, SLT)

Name: Desulfofundulus luciae (DSM 12396, SMCC W644, SLT)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 11824

Type strain

Strain Designation SLT

Culture col. no. DSM 12396 SMCC W644 SLT

NCBI tax ID(s) 74702

Special Collections DSMZ

Links

Desulfofundulus luciae SLT is an anaerobe, thermophilic prokaryote that was isolated from hot spring sediment.

anaerobe thermophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 45429

ATCC 700428,DSM 12396

@ref 20215

Last LPSN update 2025-12-16 09:49:41

Domain Bacillati

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Peptococcaceae

Genus Desulfofundulus

Species Desulfofundulus luciae

Full scientific name Desulfofundulus luciae (Liu et al. 1997) Watanabe et al. 2018

Synonyms (1)

Desulfotomaculum luciae

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
4630	DESULFOVIBRIO (POSTGATE) MEDIUM (DSMZ Medium 63)		Medium recipe at MediaDive	Name: DESULFOVIBRIO (POSTGATE) MEDIUM (DSMZ Medium 63) Composition: MgSO4 x 7 H2O 2.0 g/l Na-DL-lactate 2.0 g/l NH4Cl 1.0 g/l Yeast extract 1.0 g/l Na2SO4 1.0 g/l FeSO4 x 7 H2O 0.5 g/l K2HPO4 0.5 g/l CaCl2 x 2 H2O 0.1 g/l Na-thioglycolate 0.1 g/l Ascorbic acid 0.1 g/l Sodium resazurin 0.0005 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
4630	positive	growth	55	thermophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
4630	anaerobe
125439	anaerobe	94.1

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Sediment
#Environmental	#Aquatic	#Thermal spring
#Condition	#Thermophilic (>45°C)	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
4630	hot spring sediment	St. Lucia	Canada	CAN	North America

Taxonmaps

69479

Global distribution of 16S sequence HE582757 (>99% sequence identity) for Desulfofundulus luciae subclade from Microbeatlas

Aquatic Samples	13
Soil Samples	4
Animal Samples	5
Plant Samples	13
Total Samples	35

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
4630	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
124043	ASM3081379v1 assembly for Desulfofundulus luciae DSM 12396	contig	GCA_030813795	74702.3	2926666083	74702	64.44

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
4630	Desulfotomaculum luciae partial 16S rRNA gene, type strain DSM 12396T, clone 1	HE582754	1721	74702
4630	Desulfotomaculum luciae partial 16S rRNA gene, type strain DSM 12396T, clone 2	HE582755	1724	74702
4630	Desulfotomaculum luciae partial 16S rRNA gene, type strain DSM 12396T, clone 3	HE582756	1724	74702
4630	Desulfotomaculum luciae partial 16S rRNA gene, type strain DSM 12396T, clone 4	HE582757	1724	74702

GC content

@ref	GC-content (mol%)	Method
4630	51.4	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Desulfotomaculum luciae DSM 12396
IMG: 2926666083

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	62.60	no
125439	motility	BacteriaNetⓘ	yes	53.20	no
125439	gram_stain	BacteriaNetⓘ	positive	61.40	no
125439	oxygen_tolerance	BacteriaNetⓘ	anaerobe	94.10	no

Literature

References

#4630	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 12396
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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