Name: Acidithiobacillus ferrooxidans DSM 14882
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 118

Type strain:

Species: Acidithiobacillus ferrooxidans

Culture col. no.: DSM 14882, ATCC 23270, NCIMB 8455

Strain history: <- ATCC <- NCIMB <- P. Sneath <- W. W. Leathen (Ferrobacillus ferrooxidans)

NCBI tax ID(s): 243159 (strain), 920 (species)

SI-ID 37980

ATCC 23270, NCIB 8455, NCIMB 8455, CIP104768, CECT 4532, CCRC 13822, DSM 14882, NCIM 5068

Other strains from Acidithiobacillus ferrooxidans

A. ferrooxidans DSM 583
A. ferrooxidans DSM 584
A. ferrooxidans DSM 585
A. ferrooxidans F221, DSM 1927
A. ferrooxidans N-Fe3, DSM 9464
A. ferrooxidans NFe-4, DSM 9465
A. ferrooxidans Tf18, DSM 11477
A. ferrooxidans SP5/1, DSM 24419, JCM 39165
A. ferrooxidans R1, DSM 29444
A. ferrooxidans JCM 17309
A. ferrooxidans JCM 3863, ATCC 19859, BCRC 13033, ...
A. ferrooxidans JCM 3865
A. ferrooxidans JCM 7812

Section

Acidithiobacillus ferrooxidans DSM 14882 is a mesophilic, Gram-negative bacterium that was isolated from acid, bituminous coal mine effluent.

Gram-negative
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Acidithiobacillia*
	Order	*Acidithiobacillales*
	Family	*Acidithiobacillaceae*
	Genus	*Acidithiobacillus*
	Species	**Acidithiobacillus ferrooxidans**
	Full Scientific Name (LPSN)	Acidithiobacillus ferrooxidans (Temple and Colmer 1951) Kelly and Wood 2000

Synonym

Thiobacillus ferrooxidans

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.999

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Incubation period

3-7 days

Information on culture and growth conditions Culture and growth conditions

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Culture medium

LEPTOSPIRILLUM (HH) MEDIUM (DSMZ Medium 882)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #5597]			growth	25 °C

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Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.999

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	cardiolipin biosynthesis	100	7 of 7
[Ref.: #66794]	glycogen metabolism	100	5 of 5
[Ref.: #66794]	photosynthesis	100	14 of 14
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	ubiquinone biosynthesis	100	7 of 7
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	hydrogen production	100	5 of 5
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	lipoate biosynthesis	100	5 of 5
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	ethanol fermentation	100	2 of 2
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	biotin biosynthesis	100	4 of 4
[Ref.: #66794]	palmitate biosynthesis	95.45	21 of 22
[Ref.: #66794]	starch degradation	90	9 of 10
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	lipid A biosynthesis	88.89	8 of 9
[Ref.: #66794]	aspartate and asparagine metabolism	88.89	8 of 9
[Ref.: #66794]	valine metabolism	88.89	8 of 9
[Ref.: #66794]	isoleucine metabolism	87.5	7 of 8
[Ref.: #66794]	reductive acetyl coenzyme A pathway	85.71	6 of 7
[Ref.: #66794]	purine metabolism	81.91	77 of 94
[Ref.: #66794]	pentose phosphate pathway	81.82	9 of 11
[Ref.: #66794]	peptidoglycan biosynthesis	80	12 of 15
[Ref.: #66794]	threonine metabolism	80	8 of 10
[Ref.: #66794]	heme metabolism	78.57	11 of 14
[Ref.: #66794]	tetrahydrofolate metabolism	78.57	11 of 14
[Ref.: #66794]	molybdenum cofactor biosynthesis	77.78	7 of 9
[Ref.: #66794]	d-mannose degradation	77.78	7 of 9
[Ref.: #66794]	phenylalanine metabolism	76.92	10 of 13
[Ref.: #66794]	vitamin B1 metabolism	76.92	10 of 13
[Ref.: #66794]	C4 and CAM-carbon fixation	75	6 of 8
[Ref.: #66794]	sulfopterin metabolism	75	3 of 4
[Ref.: #66794]	glycogen biosynthesis	75	3 of 4
[Ref.: #66794]	butanoate fermentation	75	3 of 4
[Ref.: #66794]	CMP-KDO biosynthesis	75	3 of 4
[Ref.: #66794]	acetate fermentation	75	3 of 4
[Ref.: #66794]	methionine metabolism	73.08	19 of 26
[Ref.: #66794]	vitamin B6 metabolism	72.73	8 of 11
[Ref.: #66794]	sulfate reduction	69.23	9 of 13
[Ref.: #66794]	pyrimidine metabolism	68.89	31 of 45
[Ref.: #66794]	glutamate and glutamine metabolism	67.86	19 of 28
[Ref.: #66794]	serine metabolism	66.67	6 of 9
[Ref.: #66794]	glycolate and glyoxylate degradation	66.67	4 of 6
[Ref.: #66794]	octane oxidation	66.67	2 of 3
[Ref.: #66794]	L-lactaldehyde degradation	66.67	2 of 3
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	NAD metabolism	66.67	12 of 18
[Ref.: #66794]	glutathione metabolism	64.29	9 of 14
[Ref.: #66794]	gluconeogenesis	62.5	5 of 8
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
[Ref.: #66794]	alanine metabolism	62.07	18 of 29
[Ref.: #66794]	isoprenoid biosynthesis	61.54	16 of 26
[Ref.: #66794]	non-pathway related	60.53	23 of 38
[Ref.: #66794]	Entner Doudoroff pathway	60	6 of 10
[Ref.: #66794]	flavin biosynthesis	60	9 of 15
[Ref.: #66794]	glycolysis	58.82	10 of 17
[Ref.: #66794]	propanol degradation	57.14	4 of 7
[Ref.: #66794]	citric acid cycle	57.14	8 of 14
[Ref.: #66794]	CO2 fixation in Crenarchaeota	55.56	5 of 9
[Ref.: #66794]	leucine metabolism	53.85	7 of 13
[Ref.: #66794]	polyamine pathway	52.17	12 of 23
[Ref.: #66794]	histidine metabolism	51.72	15 of 29
[Ref.: #66794]	lipid metabolism	51.61	16 of 31
[Ref.: #66794]	degradation of sugar alcohols	50	8 of 16
[Ref.: #66794]	coenzyme M biosynthesis	50	5 of 10
[Ref.: #66794]	phenylmercury acetate degradation	50	1 of 2
[Ref.: #66794]	dTDPLrhamnose biosynthesis	50	4 of 8
[Ref.: #66794]	cysteine metabolism	50	9 of 18
[Ref.: #66794]	ketogluconate metabolism	50	4 of 8
[Ref.: #66794]	cis-vaccenate biosynthesis	50	1 of 2
[Ref.: #66794]	mannosylglycerate biosynthesis	50	1 of 2
[Ref.: #66794]	lysine metabolism	47.62	20 of 42
[Ref.: #66794]	phosphatidylethanolamine bioynthesis	46.15	6 of 13
[Ref.: #66794]	urea cycle	46.15	6 of 13
[Ref.: #66794]	proline metabolism	45.45	5 of 11
[Ref.: #66794]	cholesterol biosynthesis	45.45	5 of 11
[Ref.: #66794]	oxidative phosphorylation	42.86	39 of 91
[Ref.: #66794]	tyrosine metabolism	42.86	6 of 14
[Ref.: #66794]	arginine metabolism	41.67	10 of 24
[Ref.: #66794]	propionate fermentation	40	4 of 10
[Ref.: #66794]	glycine metabolism	40	4 of 10
[Ref.: #66794]	glycine betaine biosynthesis	40	2 of 5
[Ref.: #66794]	tryptophan metabolism	36.84	14 of 38
[Ref.: #66794]	metabolism of disaccharids	36.36	4 of 11
[Ref.: #66794]	dolichyl-diphosphooligosaccharide biosynthesis	36.36	4 of 11
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	33.33	4 of 12
[Ref.: #66794]	acetyl CoA biosynthesis	33.33	1 of 3
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	pantothenate biosynthesis	33.33	2 of 6
[Ref.: #66794]	nitrate assimilation	33.33	3 of 9
[Ref.: #66794]	enterobactin biosynthesis	33.33	1 of 3
[Ref.: #66794]	selenocysteine biosynthesis	33.33	2 of 6
[Ref.: #66794]	sphingosine metabolism	33.33	2 of 6
[Ref.: #66794]	cyanate degradation	33.33	1 of 3
[Ref.: #66794]	phenylpropanoid biosynthesis	30.77	4 of 13
[Ref.: #66794]	degradation of hexoses	27.78	5 of 18
[Ref.: #66794]	ascorbate metabolism	27.27	6 of 22
[Ref.: #66794]	3-phenylpropionate degradation	26.67	4 of 15
[Ref.: #66794]	carnitine metabolism	25	2 of 8
[Ref.: #66794]	lactate fermentation	25	1 of 4
[Ref.: #66794]	vitamin E metabolism	25	1 of 4
[Ref.: #66794]	toluene degradation	25	1 of 4
[Ref.: #66794]	methanogenesis from CO2	25	3 of 12
[Ref.: #66794]	degradation of pentoses	25	7 of 28
[Ref.: #66794]	cyclohexanol degradation	25	1 of 4
[Ref.: #66794]	arachidonic acid metabolism	22.22	4 of 18
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5597]	Sample type/isolated from	acid, bituminous coal mine effluent
[Ref.: #5597]	Geographic location (country and/or sea, region)	Pennsylvania
[Ref.: #5597]	Country	USA
[Ref.: #5597]	Country ISO 3 Code	USA
[Ref.: #5597]	Continent	North America
* marker position based on {}

Isolation sources categories

#Engineered	#Other	#Mine
#Condition	#Acidic	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AF465604 (>99% sequence identity) for Acidithiobacillus from Microbeatlas

Aquatic Samples	493
Soil Samples	100
Animal Samples	74
Plant Samples	6
Total Samples	673

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5597]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5597]	Thiobacillus ferrooxidans 16S rRNA sequence	M79404	279	ENA	920 tax ID
[Ref.: #20218]	Acidithiobacillus ferrooxidans 16S ribosomal RNA gene, partial sequence	AF329205	1451	ENA	920 tax ID	*
[Ref.: #20218]	Acidithiobacillus ferrooxidans strain ATCC 23270 16S ribosomal RNA gene, partial sequence; intergenic spacer, tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence	AF512809	497	ENA	920 tax ID	*
[Ref.: #20218]	Acidithiobacillus ferrooxidans strain ATCC 23270 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	EF059766	610	ENA	920 tax ID	*
[Ref.: #20218]	Thiobacillus ferrooxidans 16S rRNA sequence	M79405	274	ENA	920 tax ID	*
[Ref.: #20218]	Thiobacillus ferrooxidans 16S rRNA sequence	M79406	312	ENA	920 tax ID	*
[Ref.: #20218]	Acidithiobacillus ferrooxidans strain ATCC23270 16S ribosomal RNA gene, partial sequence	AF465604	1461	ENA	920 tax ID	*
[Ref.: #20218]	Acidithiobacillus ferrooxidans gene, 16S-23S rDNA region, strain: ATCC 23270	AB189135	441	ENA	920 tax ID	*
[Ref.: #20218]	Acidithiobacillus ferrooxidans partial 16S rRNA gene, strain ATCC23270T	AJ278718	1342	ENA	920 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Acidithiobacillus ferrooxidans ATCC 23270	GCA_000021485	complete	GenBank	243159 tax ID	*
[Ref.: #66792]	Acidithiobacillus ferrooxidans ATCC 23270	243159.4	complete	PATRIC	243159 tax ID	*
[Ref.: #66792]	Acidithiobacillus ferrooxidans ATCC 23270	643348501	complete	JGI IMG/M	243159 tax ID	*

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GC-content

58-59 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Acidithiobacillus ferrooxidans ATCC 23270 PATRIC: 243159.4
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Acidithiobacillus ferrooxidans ATCC 23270 ATCC 23270 NCBI: GCA_000021485.1
[Ref.: #69480]	motile	no	78.797	no
[Ref.: #69480]	flagellated	no	98.392	no
[Ref.: #69480]	gram-positive	no	97.761	no
[Ref.: #69480]	anaerobic	no	94.981	no
[Ref.: #69480]	halophile	no	88.894	no
[Ref.: #69480]	spore-forming	no	95.493	no
[Ref.: #69480]	thermophile	no	96.922	yes
[Ref.: #69480]	glucose-util	yes	55.071	no
[Ref.: #69480]	aerobic	no	82.791	no
[Ref.: #69480]	glucose-ferment	no	85.826	no

Availability in culture collections External links

[Ref.: #5597]

Culture collection no.

DSM 14882, ATCC 23270, NCIMB 8455

[Ref.: #69801]

SI-ID 37980

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Metabolism	In silico genome analysis of an acid mine drainage species, Acidiphilium multivorum, for potential commercial acetic acid production and biomining.	Micciche AC, Barabote RD, Dittoe DK, Ricke SC	J Environ Sci Health B	10.1080/03601234.2019.1710985	2020	*
Metabolism	A regulation mechanism for the promoter region of the pet II operon in Acidithiobacillus ferrooxidans ATCC23270.	Zhang L, Wang T, Yang Y, Yang JM	Biochem Biophys Res Commun	10.1016/j.bbrc.2020.09.088	2020	*
Biotechnology	High copper concentration reduces biofilm formation in Acidithiobacillus ferrooxidans by decreasing production of extracellular polymeric substances and its adherence to elemental sulfur.	Vargas-Straube MJ, Beard S, Norambuena R, Paradela A, Vera M, Jerez CA	J Proteomics	10.1016/j.jprot.2020.103874	2020	*
Metabolism	Early reprecipitation of sulfate salts in coal biodesulfurization processes using acidophilic chemolithotrophic bacteria.	Duarte Briceno PG, Caicedo Pineda GA, Marquez Godoy MA	World J Microbiol Biotechnol	10.1007/s11274-020-02855-w	2020	*
Metabolism	Arsenic(III) biotransformation to tooeleite associated with the oxidation of Fe(II) via Acidithiobacillus ferrooxidans.	Wang X, Li Q, Liao Q, Yan Y, Xia J, Lin Q, Wang Q, Liang Y	Chemosphere	10.1016/j.chemosphere.2020.126080	2020	*
Stress	Proteomics Reveal Enhanced Oxidative Stress Responses and Metabolic Adaptation in Acidithiobacillus ferrooxidans Biofilm Cells on Pyrite.	Bellenberg S, Huynh D, Poetsch A, Sand W, Vera M	Front Microbiol	10.3389/fmicb.2019.00592	2019	*
Metabolism	Identification and Analysis of a Novel Gene Cluster Involves in Fe(2+) Oxidation in Acidithiobacillus ferrooxidans ATCC 23270, a Typical Biomining Acidophile.	Ai C, Liang Y, Miao B, Chen M, Zeng W, Qiu G	Curr Microbiol	10.1007/s00284-018-1453-9	2018	*
Phylogeny	Functionality of tRNAs encoded in a mobile genetic element from an acidophilic bacterium.	Alamos P, Tello M, Bustamante P, Gutierrez F, Shmaryahu A, Maldonado J, Levican G, Orellana O	RNA Biol	10.1080/15476286.2017.1349049	2017	*
Metabolism	Insights into the fluoride-resistant regulation mechanism of Acidithiobacillus ferrooxidans ATCC 23270 based on whole genome microarrays.	Ma L, Li Q, Shen L, Feng X, Xiao Y, Tao J, Liang Y, Yin H, Liu X	J Ind Microbiol Biotechnol	10.1007/s10295-016-1827-6	2016	*
Phylogeny	Missing Iron-Oxidizing Acidophiles Highly Sensitive to Organic Compounds.	Ueoka N, Kouzuma A, Watanabe K	Microbes Environ	10.1264/jsme2.ME16086	2016	*
Metabolism	Acidithiobacillus ferrooxidans's comprehensive model driven analysis of the electron transfer metabolism and synthetic strain design for biomining applications.	Campodonico MA, Vaisman D, Castro JF, Razmilic V, Mercado F, Andrews BA, Feist AM, Asenjo JA	Metab Eng Commun	10.1016/j.meteno.2016.03.003	2016	*
Genetics	A Comprehensive tRNA Genomic Survey Unravels the Evolutionary History of tRNA Arrays in Prokaryotes.	Tran TT, Belahbib H, Bonnefoy V, Talla E	Genome Biol Evol	10.1093/gbe/evv254	2015	*
Metabolism	Evidence of cell surface iron speciation of acidophilic iron-oxidizing microorganisms in indirect bioleaching process.	Nie ZY, Liu HC, Xia JL, Yang Y, Zhen XJ, Zhang LJ, Qiu GZ	Biometals	10.1007/s10534-015-9893-1	2015	*
Metabolism	Cytoplasmic CopZ-Like Protein and Periplasmic Rusticyanin and AcoP Proteins as Possible Copper Resistance Determinants in Acidithiobacillus ferrooxidans ATCC 23270.	Navarro CA, von Bernath D, Martinez-Bussenius C, Castillo RA, Jerez CA	Appl Environ Microbiol	10.1128/AEM.02810-15	2015	*
Pathogenicity	Toxin-antitoxin systems in the mobile genome of Acidithiobacillus ferrooxidans.	Bustamante P, Tello M, Orellana O	PLoS One	10.1371/journal.pone.0112226	2014	*
Metabolism	Response to copper of Acidithiobacillus ferrooxidans ATCC 23270 grown in elemental sulfur.	Almarcegui RJ, Navarro CA, Paradela A, Albar JP, von Bernath D, Jerez CA	Res Microbiol	10.1016/j.resmic.2014.07.005	2014	*
Enzymology	Identification and characterization of an ETHE1-like sulfur dioxygenase in extremely acidophilic Acidithiobacillus spp.	Wang H, Liu S, Liu X, Li X, Wen Q, Lin J	Appl Microbiol Biotechnol	10.1007/s00253-014-5830-4	2014	*
Pathogenicity	Heavy metal resistance strategies of acidophilic bacteria and their acquisition: importance for biomining and bioremediation.	Navarro CA, von Bernath D, Jerez CA	Biol Res	10.4067/S0716-97602013000400008	2013	*
Metabolism	New copper resistance determinants in the extremophile acidithiobacillus ferrooxidans: a quantitative proteomic analysis.	Almarcegui RJ, Navarro CA, Paradela A, Albar JP, von Bernath D, Jerez CA	J Proteome Res	10.1021/pr4009833	2014	*
Metabolism	Attachment of Acidithiobacillus ferrooxidans onto different solid substrates and fitting through Langmuir and Freundlich equations.	Xia LX, Shen Z, Vargas T, Sun WJ, Ruan RM, Xie ZD, Qiu GZ	Biotechnol Lett	10.1007/s10529-013-1316-1	2013	*
Pathogenicity	[Effect of simulated heavy metal leaching solution of electroplating sludge on the bioactivity of Acidithiobacillus ferrooxidans].	Xie XY, Sun PD, Lou JQ, Guo MX, Ma WG	Huan Jing Ke Xue		2013	*
Pathogenicity	ICE Afe 1, an actively excising genetic element from the biomining bacterium Acidithiobacillus ferrooxidans.	Bustamante P, Covarrubias PC, Levican G, Katz A, Tapia P, Holmes D, Quatrini R, Orellana O	J Mol Microbiol Biotechnol	10.1159/000346669	2013	*
Genetics	Type IV pili of Acidithiobacillus ferrooxidans can transfer electrons from extracellular electron donors.	Li Y, Li H	J Basic Microbiol	10.1002/jobm.201200300	2013	*
Phylogeny	Differential gene expression and bioinformatics analysis of copper resistance gene afe_1073 in Acidithiobacillus ferrooxidans.	Hu Q, Wu X, Jiang Y, Liu Y, Liang Y, Liu X, Yin H, Baba N	Biol Trace Elem Res	10.1007/s12011-012-9589-0	2013	*
Pathogenicity	Shotgun proteomics study of early biofilm formation process of Acidithiobacillus ferrooxidans ATCC 23270 on pyrite.	Vera M, Krok B, Bellenberg S, Sand W, Poetsch A	Proteomics	10.1002/pmic.201200386	2013	*
Enzymology	Tetrathionate-forming thiosulfate dehydrogenase from the acidophilic, chemolithoautotrophic bacterium Acidithiobacillus ferrooxidans.	Kikumoto M, Nogami S, Kanao T, Takada J, Kamimura K	Appl Environ Microbiol	10.1128/AEM.02251-12	2012	*
Enzymology	Cloning, expression and bioinformatics analysis of ATP sulfurylase from Acidithiobacillus ferrooxidans ATCC 23270 in Escherichia coli.	Jaramillo ML, Abanto M, Quispe RL, Calderon J, Del Valle LJ, Talledo M, Ramirez P	Bioinformation	10.6026/97320630008695	2012	*
Transcriptome	Global transcriptional analysis of stress-response strategies in Acidithiobacillus ferrooxidans ATCC 23270 exposed to organic extractant--Lix984n.	Zhou Z, Fang Y, Li Q, Yin H, Qin W, Liang Y, Li Q, Li N, Liu X, Qiu G, Liu X	World J Microbiol Biotechnol	10.1007/s11274-011-0903-3	2011	*
Metabolism	Cloning, expression, and functional analysis of molecular motor pilT and pilU genes of type IV pili in Acidithiobacillus ferrooxidans.	Li Y, Huang S, Zhang X, Huang T, Li H	Appl Microbiol Biotechnol	10.1007/s00253-012-4271-1	2012	*
Metabolism	Transcriptional and functional studies of a Cd(II)/Pb(II)-responsive transcriptional regulator(CmtR) from Acidithiobacillus ferrooxidans ATCC 23270.	Zheng C, Li Y, Nie L, Qian L, Cai L, Liu J	Curr Microbiol	10.1007/s00284-012-0117-4	2012	*
Cultivation	Development of a markerless gene replacement system for Acidithiobacillus ferrooxidans and construction of a pfkB mutant.	Wang H, Liu X, Liu S, Yu Y, Lin J, Lin J, Pang X, Zhao J	Appl Environ Microbiol	10.1128/AEM.07230-11	2011	*
Phylogeny	The small heat shock proteins from Acidithiobacillus ferrooxidans: gene expression, phylogenetic analysis, and structural modeling.	Ribeiro DA, Bem LE, Vicentini R, Ferraz LF, Murakami MT, Ottoboni LM	BMC Microbiol	10.1186/1471-2180-11-259	2011	*
Metabolism	The extremophile Acidithiobacillus ferrooxidans possesses a c-di-GMP signalling pathway that could play a significant role during bioleaching of minerals.	Ruiz LM, Castro M, Barriga A, Jerez CA, Guiliani N	Lett Appl Microbiol	10.1111/j.1472-765X.2011.03180.x	2011	*
Metabolism	Genome wide identification of Acidithiobacillus ferrooxidans (ATCC 23270) transcription factors and comparative analysis of ArsR and MerR metal regulators.	Hodar C, Moreno P, di Genova A, Latorre M, Reyes-Jara A, Maass A, Gonzalez M, Cambiazo V	Biometals	10.1007/s10534-011-9484-8	2011	*
Pathogenicity	A genomic island provides Acidithiobacillus ferrooxidans ATCC 53993 additional copper resistance: a possible competitive advantage.	Orellana LH, Jerez CA	Appl Microbiol Biotechnol	10.1007/s00253-011-3494-x	2011	*
Metabolism	Sulfite oxidation catalyzed by aa(3)-type cytochrome c oxidase in Acidithiobacillus ferrooxidans.	Sugio T, Ako A, Takeuchi F	Biosci Biotechnol Biochem	10.1271/bbb.100446	2010	*
Pathogenicity	Cytoplasmic membrane response to copper and nickel in Acidithiobacillus ferrooxidans.	Mykytczuk NC, Trevors JT, Ferroni GD, Leduc LG	Microbiol Res	10.1016/j.micres.2010.03.004	2010	*
Enzymology	K30, H150, and H168 are essential residues for coordinating pyridoxal 5'-phosphate of O-acetylserine sulfhydrylase from Acidithiobacillus ferrooxidans.	Zheng C, Nie L, Qian L, Wang Z, Liu G, Liu J	Curr Microbiol	10.1007/s00284-009-9565-x	2009	*
Metabolism	Type IV pili of Acidithiobacillus ferrooxidans are necessary for sliding, twitching motility, and adherence.	Li YQ, Wan DS, Huang SS, Leng FF, Yan L, Ni YQ, Li HY	Curr Microbiol	10.1007/s00284-009-9494-8	2009	*
Metabolism	Cys92, Cys101, Cys197, and Cys203 are crucial residues for coordinating the iron-sulfur cluster of RhdA from Acidithiobacillus ferrooxidans.	Dai Y, Liu J, Zheng C, Wu A, Zeng J, Qiu G	Curr Microbiol	10.1007/s00284-009-9476-x	2009	*
Metabolism	Extending the models for iron and sulfur oxidation in the extreme acidophile Acidithiobacillus ferrooxidans.	Quatrini R, Appia-Ayme C, Denis Y, Jedlicki E, Holmes DS, Bonnefoy V	BMC Genomics	10.1186/1471-2164-10-394	2009	*
Enzymology	Preliminary X-ray crystallographic analysis of sulfide:quinone oxidoreductase from Acidithiobacillus ferrooxidans.	Zhang Y, Cherney MM, Solomonson M, Liu J, James MN, Weiner JH	Acta Crystallogr Sect F Struct Biol Cryst Commun	10.1107/S1744309109027535	2009	*
Metabolism	Ferrous iron production mediated by tetrathionate hydrolase in tetrathionate-, sulfur-, and iron-grown Acidithiobacillus ferrooxidans ATCC 23270 cells.	Sugio T, Taha TM, Takeuchi F	Biosci Biotechnol Biochem	10.1271/bbb.90036	2009	*
Phylogeny	Comparative genomic analysis of Acidithiobacillus ferrooxidans strains using the A. ferrooxidans ATCC 23270 whole-genome oligonucleotide microarray.	Luo H, Shen L, Yin H, Li Q, Chen Q, Luo Y, Liao L, Qiu G, Liu X	Can J Microbiol	10.1139/w08-158	2009	*
Genetics	Real-time PCR analysis of the heat-shock response of Acidithiobacillus ferrooxidans ATCC 23270.	Xiao S, Chao J, Wang W, Fang F, Qui G, Liu X	Folia Biol (Praha)	FB2009A0001	2009	*
Metabolism	[Response of genes for synthesizing the magnetic of Acidithiobacillus ferrooxidans to different concentration of Fe2+ stress].	Liu X, Wu H, Liu W, Li S	Sheng Wu Gong Cheng Xue Bao		2009	*
Genetics	A stoichiometric model of Acidithiobacillus ferrooxidans ATCC 23270 for metabolic flux analysis.	Hold C, Andrews BA, Asenjo JA	Biotechnol Bioeng	10.1002/bit.22183	2009	*
Metabolism	Investigation of elemental sulfur speciation transformation mediated by Acidithiobacillus ferrooxidans.	He H, Zhang CG, Xia JL, Peng AA, Yang Y, Jiang HC, Zheng L, Ma CY, Zhao YD, Nie ZY, Qiu GZ	Curr Microbiol	10.1007/s00284-008-9330-6	2008	*
Genetics	Acidithiobacillus ferrooxidans metabolism: from genome sequence to industrial applications.	Valdes J, Pedroso I, Quatrini R, Dodson RJ, Tettelin H, Blake R 2nd, Eisen JA, Holmes DS	BMC Genomics	10.1186/1471-2164-9-597	2008	*
Metabolism	Regulation of CO2 fixation gene expression in Acidithiobacillus ferrooxidans ATCC 23270 by Lix984n shock.	Wang W, Xiao S, Chao J, Chen Q, Qiu G, Liu X	J Microbiol Biotechnol	10.4014/jmb.0700.737	2008	*
Enzymology	Expression, purification, and characterization of iron-sulfur cluster assembly regulator IscR from Acidithiobacillus ferrooxidans.	Zeng J, Zhang K, Liu J, Qiu G	J Microbiol Biotechnol	8097	2008	*
Enzymology	Reconstitution of iron oxidase from sulfur-grown Acidithiobacillus ferrooxidans.	Taha TM, Kanao T, Takeuchi F, Sugio T	Appl Environ Microbiol	10.1128/AEM.00787-08	2008	*
Metabolism	Reduction of Hg2+ with reduced mammalian cytochrome c by cytochrome c oxidase purified from a mercury-resistant acidithiobacillus ferrooxidans strain, MON-1.	Sugio T, Fujii M, Ninomiya Y, Kanao T, Negishi A, Takeuchi F	Biosci Biotechnol Biochem	10.1271/bbb.80070	2008	*
Metabolism	In vitro assembly of [Fe4S4] cluster in high potential iron-sulfur protein from Acidithiobacillus ferrooxidans.	Zeng J, Jiang H, Geng M, Wang Y, Zhang X, Liu J, Qiu G	Curr Microbiol	10.1007/s00284-008-9170-4	2008	*
Phylogeny	ribB and ribBA genes from Acidithiobacillus ferrooxidans: expression levels under different growth conditions and phylogenetic analysis.	Knegt FH, Mello LV, Reis FC, Santos MT, Vicentini R, Ferraz LF, Ottoboni LM	Res Microbiol	10.1016/j.resmic.2008.04.002	2008	*
Phylogeny	Isolation and characterization of Acidithiobacillus ferrooxidans strain D3-2 active in copper bioleaching from a copper mine in Chile.	Sugio T, Wakabayashi M, Kanao T, Takeuchi F	Biosci Biotechnol Biochem	10.1271/bbb.70743	2008	*
Metabolism	The chemolithoautotroph Acidithiobacillus ferrooxidans can survive under phosphate-limiting conditions by expressing a C-P lyase operon that allows it to grow on phosphonates.	Vera M, Pagliai F, Guiliani N, Jerez CA	Appl Environ Microbiol	10.1128/AEM.02101-07	2008	*
Genetics	The genome sequence of the metal-mobilizing, extremely thermoacidophilic archaeon Metallosphaera sedula provides insights into bioleaching-associated metabolism.	Auernik KS, Maezato Y, Blum PH, Kelly RM	Appl Environ Microbiol	10.1128/AEM.02019-07	2007	*
Enzymology	Expression, purification and characterization of a high potential iron-sulfur protein from Acidithiobacillus ferrooxidans.	Zeng J, Jiang H, Liu Y, Liu J, Qiu G	Biotechnol Lett	10.1007/s10529-007-9612-2	2007	*
Metabolism	Increase in Fe2+-producing activity during growth of Acidithiobacillus ferrooxidans ATCC23270 on sulfur.	Sugio T, Taha TM, Kanao T, Takeuchi F	Biosci Biotechnol Biochem	10.1271/bbb.70253	2007	*
Metabolism	Penetration analysis of elements and bioleaching treatment of spent refractory for recycling.	Masafumi T, Masanori F	J Environ Sci (China)	10.1016/s1001-0742(07)60187-9	2007	*
Enzymology	Expression, purification, and characterization of a [Fe2S2] cluster containing ferredoxin from Acidithiobacillus ferrooxidans.	Zeng J, Huang X, Liu Y, Liu J, Qiu G	Curr Microbiol	10.1007/s00284-007-9025-4	2007	*
Biotechnology	Identification of a gene encoding a tetrathionate hydrolase in Acidithiobacillus ferrooxidans.	Kanao T, Kamimura K, Sugio T	J Biotechnol	10.1016/j.jbiotec.2007.08.030	2007	*
Enzymology	Expression, purification and characterization of a cysteine desulfurase, IscS, from Acidithiobacillus ferrooxidans.	Zeng J, Zhang Y, Liu Y, Zhang X, Xia L, Liu J, Qiu G	Biotechnol Lett	10.1007/s10529-007-9491-6	2007	*
Metabolism	The IscA from Acidithiobacillus ferrooxidans is an iron-sulfur protein which assemble the [Fe4S4] cluster with intracellular iron and sulfur.	Zeng J, Geng M, Jiang H, Liu Y, Liu J, Qiu G	Arch Biochem Biophys	10.1016/j.abb.2007.03.024	2007	*
Metabolism	Differential expression of two bc1 complexes in the strict acidophilic chemolithoautotrophic bacterium Acidithiobacillus ferrooxidans suggests a model for their respective roles in iron or sulfur oxidation.	Bruscella P, Appia-Ayme C, Levican G, Ratouchniak J, Jedlicki E, Holmes DS, Bonnefoy V	Microbiology (Reading)	10.1099/mic.0.2006/000067-0	2007	*
Metabolism	The ferric iron uptake regulator (Fur) from the extreme acidophile Acidithiobacillus ferrooxidans.	Quatrini R, Lefimil C, Holmes DS, Jedlicki E	Microbiology (Reading)	10.1099/mic.0.27581-0	2005	*
Metabolism	The HiPIP from the acidophilic Acidithiobacillus ferrooxidans is correctly processed and translocated in Escherichia coli, in spite of the periplasm pH difference between these two micro-organisms.	Bruscella P, Cassagnaud L, Ratouchniak J, Brasseur G, Lojou E, Amils R, Bonnefoy V	Microbiology (Reading)	10.1099/mic.0.27476-0	2005	*
Metabolism	Identification of putative sulfurtransferase genes in the extremophilic Acidithiobacillus ferrooxidans ATCC 23270 genome: structural and functional characterization of the proteins.	Acosta M, Beard S, Ponce J, Vera M, Mobarec JC, Jerez CA	OMICS	10.1089/omi.2005.9.13	2005	*
Metabolism	Copper ions stimulate polyphosphate degradation and phosphate efflux in Acidithiobacillus ferrooxidans.	Alvarez S, Jerez CA	Appl Environ Microbiol	10.1128/AEM.70.9.5177-5182.2004	2004	*
Phylogeny	Differentiation of Acidithiobacillus ferrooxidans and A. thiooxidans strains based on 16S-23S rDNA spacer polymorphism analysis.	Bergamo RF, Novo MT, Verissimo RV, Paulino LC, Stoppe NC, Sato MI, Manfio GP, Prado PI, Garcia O Jr, Ottoboni LM	Res Microbiol	10.1016/j.resmic.2004.03.009	2004	*
Metabolism	Differential protein expression during growth of Acidithiobacillus ferrooxidans on ferrous iron, sulfur compounds, or metal sulfides.	Ramirez P, Guiliani N, Valenzuela L, Beard S, Jerez CA	Appl Environ Microbiol	10.1128/AEM.70.8.4491-4498.2004	2004	*
Phylogeny	Phylogenetic heterogeneity of the species Acidithiobacillus ferrooxidans.	Karavaiko GI, Turova TP, Kondrat'eva TF, Lysenko AM, Kolganova TV, Ageeva SN, Muntyan LN, Pivovarova TA	Int J Syst Evol Microbiol	10.1099/ijs.0.02319-0	2003	*
Metabolism	Numerical modeling of ferrous-ion oxidation rate in Acidithiobacillus ferrooxidans ATCC 23270: optimization of culture conditions through statistically designed experiments.	Abdel-Fattah YR, Abdel-Fattah WR, Zamilpa R, Pierce JR	Acta Microbiol Pol		2002	*
Enzymology	The bc(1) complex of the iron-grown acidophilic chemolithotrophic bacterium Acidithiobacillus ferrooxidans functions in the reverse but not in the forward direction. Is there a second bc(1) complex?	Brasseur G, Bruscella P, Bonnefoy V, Lemesle-Meunier D	Biochim Biophys Acta	10.1016/s0005-2728(02)00251-7	2002	*
Enzymology	Two Copies of form I RuBisCO genes in Acidithiobacillus ferrooxidans ATCC 23270.	Heinhorst S, Baker SH, Johnson DR, Davies PS, Cannon GC, Shively JM	Curr Microbiol	10.1007/s00284-001-0094-5	2002	*
Cultivation	Cytochromes c of Acidithiobacillus ferrooxidans.	Yarzabal A, Brasseur G, Bonnefoy V	FEMS Microbiol Lett	10.1111/j.1574-6968.2002.tb11130.x	2002	*
Metabolism	An exported rhodanese-like protein is induced during growth of Acidithiobacillus ferrooxidans in metal sulfides and different sulfur compounds.	Ramirez P, Toledo H, Guiliani N, Jerez CA	Appl Environ Microbiol	10.1128/AEM.68.4.1837-1845.2002	2002	*
Enzymology	Characterization of a new dihemic c(4)-type cytochrome isolated from Thiobacillus ferrooxidans.	Giudici-Orticoni MT, Leroy G, Nitschke W, Bruschi M	Biochemistry	10.1021/bi992846p	2000	*
Genetics	Functional analysis of gapped microbial genomes: amino acid metabolism of Thiobacillus ferrooxidans.	Selkov E, Overbeek R, Kogan Y, Chu L, Vonstein V, Holmes D, Silver S, Haselkorn R, Fonstein M	Proc Natl Acad Sci U S A	10.1073/pnas.97.7.3509	2000	*
Enzymology	Sulfur-binding protein of flagella of Thiobacillus ferrooxidans.	Ohmura N, Tsugita K, Koizumi JI, Saika H	J Bacteriol	10.1128/jb.178.19.5776-5780.1996	1996	*
Metabolism	Thiobacillus ferrooxidans, a facultative hydrogen oxidizer.	Drobner E, Huber H, Stetter KO	Appl Environ Microbiol	10.1128/aem.56.9.2922-2923.1990	1990	*
	The Type IV Secretion System of ICEAfe1: Formation of a Conjugative Pilus in Acidithiobacillus ferrooxidans.	Flores-Rios R, Moya-Beltran A, Pareja-Barrueto C, Arenas-Salinas M, Valenzuela S, Orellana O, Quatrini R	Front Microbiol	10.3389/fmicb.2019.00030	2019	*
	Possible Role of Envelope Components in the Extreme Copper Resistance of the Biomining Acidithiobacillus ferrooxidans.	Oetiker N, Norambuena R, Martinez-Bussenius C, Navarro CA, Amaya F, Alvarez SA, Paradela A, Jerez CA	Genes (Basel)	10.3390/genes9070347	2018	*
	Insights into the Quorum Sensing Regulon of the Acidophilic Acidithiobacillus ferrooxidans Revealed by Transcriptomic in the Presence of an Acyl Homoserine Lactone Superagonist Analog.	Mamani S, Moinier D, Denis Y, Soulere L, Queneau Y, Talla E, Bonnefoy V, Guiliani N	Front Microbiol	10.3389/fmicb.2016.01365	2016	*
	Growth of Acidithiobacillus Ferrooxidans ATCC 23270 in Thiosulfate Under Oxygen-Limiting Conditions Generates Extracellular Sulfur Globules by Means of a Secreted Tetrathionate Hydrolase.	Beard S, Paradela A, Albar JP, Jerez CA	Front Microbiol	10.3389/fmicb.2011.00079	2011	*
	Periplasmic proteins of the extremophile Acidithiobacillus ferrooxidans: a high throughput proteomics analysis.	Chi A, Valenzuela L, Beard S, Mackey AJ, Shabanowitz J, Hunt DF, Jerez CA	Mol Cell Proteomics	10.1074/mcp.M700042-MCP200	2007	*
	Mechanism of microbial flotation using Thiobacillus ferrooxidans for pyrite suppression.	Ohmura N, Kitamura K, Saiki H	Biotechnol Bioeng	10.1002/bit.260410611	1993	*

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Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14882

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Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

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Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

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Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

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Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

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João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

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Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

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Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

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Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID37980.1 )

* These data were automatically processed and therefore are not curated

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Acidithiobacillus ferrooxidans ATCC 23270

Acidithiobacillus ferrooxidans ATCC 23270 ATCC 23270

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