Desulfitobacterium chlororespirans (DSM 11544, ATCC 700175, Co23)

Name: Desulfitobacterium chlororespirans (DSM 11544, ATCC 700175, Co23)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 11770

Type strain

Strain Designation Co23

Culture col. no. DSM 11544 ATCC 700175 Co23

NCBI tax ID(s) 1121395 51616

Special Collections DSMZ

History <- F. E. Löffler, Co23

Links

Desulfitobacterium chlororespirans Co23 is an anaerobe bacterium that was isolated from compost soil.

anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 43808

ATCC 700175,DSM 11544

@ref 20215

Last LPSN update 2026-02-09 11:20:39

Domain Bacteria

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Desulfitobacteriaceae

Genus Desulfitobacterium

Species Desulfitobacterium chlororespirans

Full scientific name Desulfitobacterium chlororespirans Sanford et al. 2001

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
4410	DESULFITOBACTERIUM HAFNIENSE MEDIUM (DSMZ Medium 720)		Medium recipe at MediaDive	Name: DESULFITOBACTERIUM HAFNIENSE MEDIUM (DSMZ Medium 720) Composition: NaHCO3 2.59222 g/l Na-pyruvate 2.49252 g/l Na2S2O3 x 5 H2O 1.24626 g/l NH4Cl 0.997009 g/l Yeast extract 0.997009 g/l K2HPO4 x 3 H2O 0.398804 g/l Na2S x 9 H2O 0.299103 g/l MgCl2 x 6 H2O 0.0997009 g/l NaCl 0.0997009 g/l CaCl2 x 2 H2O 0.0498504 g/l Na2-EDTA x 2 H2O 0.00518445 g/l FeCl2 x 4 H2O 0.00149551 g/l NaOH 0.000498504 g/l Sodium resazurin 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l MnCl2 x 4 H2O 9.97009e-05 g/l Pyridoxine hydrochloride 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l Thiamine HCl 4.98504e-05 g/l Riboflavin 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Biotin 1.99402e-05 g/l Folic acid 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
4410	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
4410	anaerobe
125439	anaerobe	94.2

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Biodegradation	#Composting
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
4410	compost soil	USA	USA	North America

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
4410	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	IMG-taxon 2582580732 annotated assembly for Desulfitobacterium chlororespirans DSM 11544	scaffold	GCA_900143285	1121395.3	2582580732	1121395	68.45

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
4410	Desulfitobacterium chlororespirans 16S ribosomal RNA gene, partial sequence	U68528	1507		51616

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Desulfitobacterium chlororespirans DSM 11544
NCBI: GCA_900143285

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	80.00	no
125439	motility	BacteriaNetⓘ	yes	68.40	no
125439	gram_stain	BacteriaNetⓘ	variable	78.20	no
125439	oxygen_tolerance	BacteriaNetⓘ	anaerobe	94.20	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Desulfitobacterium chlororespirans DSM 11544 DSM 11544
NCBI: GCA_900143285.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	58.01	no
125438	anaerobic	anaerobicⓘ	yes	73.70	no
125438	aerobic	aerobicⓘ	no	85.82	yes
125438	spore-forming	spore-formingⓘ	yes	81.14	no
125438	thermophilic	thermophileⓘ	no	92.05	yes
125438	flagellated	motile2+ⓘ	yes	73.25	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Two-phase partitioning bioreactor for the biodegradation of high concentrations of pentachlorophenol using Sphingobium chlorophenolicum DSM 8671.	Zilouei H, Guieysse B, Mattiasson B.	Chemosphere	10.1016/j.chemosphere.2008.04.035	2008
Metabolism	Fraction of electrons consumed in electron acceptor reduction and hydrogen thresholds as indicators of halorespiratory physiology.	Loffler FE, Tiedje JM, Sanford RA.	Appl Environ Microbiol	10.1128/aem.65.9.4049-4056.1999	1999
Metabolism	Microbial anaerobic demethylation and dechlorination of chlorinated hydroquinone metabolites synthesized by basidiomycete fungi.	Milliken CE, Meier GP, Watts JE, Sowers KR, May HD.	Appl Environ Microbiol	10.1128/aem.70.1.385-392.2004	2004
Metabolism	Sulfonates as terminal electron acceptors for growth of sulfite-reducing bacteria (Desulfitobacterium spp.) and sulfate-reducing bacteria: effects of inhibitors of sulfidogenesis.	Lie TJ, Godchaux W, Leadbetter ER.	Appl Environ Microbiol	10.1128/aem.65.10.4611-4617.1999	1999
Phylogeny	Flavobacterium palustre sp. nov., isolated from wetland soil.	Feng H, Zeng Y, Huang Y.	Int J Syst Evol Microbiol	10.1099/ijs.0.000054	2015
Metabolism	Characterization of two tetrachloroethene-reducing, acetate-oxidizing anaerobic bacteria and their description as Desulfuromonas michiganensis sp. nov.	Sung Y, Ritalahti KM, Sanford RA, Urbance JW, Flynn SJ, Tiedje JM, Loffler FE.	Appl Environ Microbiol	10.1128/aem.69.5.2964-2974.2003	2003

References

#4410	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11544
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Desulfitobacterium chlororespirans (DSM 11544, ATCC 700175, Co23)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900143285

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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