Name: Desulfitobacterium sp. DSM 10344
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 11763

Type strain:

Species: Desulfitobacterium sp.

Culture col. no.: DSM 10344, PCE 1

Strain history: <- J. Gerritse; PCE1 <- J. Gerritse {1995}

NCBI tax ID(s): 146907 (species)

SI-ID 48816

DSM 10344

Section

Desulfitobacterium sp. DSM 10344 is an anaerobe, mesophilic bacterium that was isolated from soil.

anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Desulfitobacteriaceae*
	Genus	*Desulfitobacterium*
	Full Scientific Name (LPSN)	Desulfitobacterium Utkin et al. 1994

Information on culture and growth conditions Culture and growth conditions

[Ref.: #3914]

Culture medium

DESULFITOBACTERIUM (PCE) MEDIUM (DSMZ Medium 717)

[Ref.: #3914]

Culture medium growth

[Ref.: #3914]

Culture medium link

Medium recipe at MediaDive

[Ref.: #3914]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #3914]			growth	35 °C

[Ref.: #3914]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #3914]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #3914]	Sample type/isolated from	soil
[Ref.: #3914]	Country	Netherlands
[Ref.: #3914]	Country ISO 3 Code	NLD
[Ref.: #3914]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Desulfitobacterium sp. PCE1 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	DQ834683	689	ENA	146907 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Desulfitobacterium sp. PCE1, DSM 10344	2512875014	draft	JGI IMG/M	146907 tax ID	*

Availability in culture collections External links

[Ref.: #3914]

Culture collection no.

DSM 10344, PCE 1

[Ref.: #80981]

SI-ID 48816

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Determination of intrinsic monod kinetic parameters for two heterotrophic tetrachloroethene (PCE)-respiring strains and insight into their application.	Huang D, Becker JG	Biotechnol Bioeng	10.1002/bit.22421	2009	*
Phylogeny	Heterogeneity between 16S ribosomal RNA gene copies borne by one Desulfitobacterium strain is caused by different 100-200 bp insertions in the 5' region.	Villemur R, Constant P, Gauthier A, Shareck M, Beaudet R	Can J Microbiol	10.1139/w06-111	2007	*
Metabolism	Chlorophenol production by anaerobic microorganisms: transformation of a biogenic chlorinated hydroquinone metabolite.	Milliken CE, Meier GP, Sowers KR, May HD	Appl Environ Microbiol	10.1128/AEM.70.4.2494-2496.2004	2004	*
Enzymology	Development of degenerate and specific PCR primers for the detection and isolation of known and putative chloroethene reductive dehalogenase genes.	Regeard C, Maillard J, Holliger C	J Microbiol Methods	10.1016/j.mimet.2003.09.019	2004	*
Enzymology	Influence of different electron donors and acceptors on dehalorespiration of tetrachloroethene by Desulfitobacterium frappieri TCE1.	Gerritse J, Drzyzga O, Kloetstra G, Keijmel M, Wiersum LP, Hutson R, Collins MD, Gottschal JC	Appl Environ Microbiol	10.1128/AEM.65.12.5212-5221.1999	1999	*
Metabolism	Sulfonates as terminal electron acceptors for growth of sulfite-reducing bacteria (Desulfitobacterium spp.) and sulfate-reducing bacteria: effects of inhibitors of sulfidogenesis.	Lie TJ, Godchaux W, Leadbetter ER	Appl Environ Microbiol	10.1128/AEM.65.10.4611-4617.1999	1999	*
Metabolism	Desulfitobacterium sp. strain PCE1, an anaerobic bacterium that can grow by reductive dechlorination of tetrachloroethene or ortho-chlorinated phenols.	Gerritse J, Renard V, Pedro Gomes TM, Lawson PA, Collins MD, Gottschal JC	Arch Microbiol	10.1007/s002030050308	1996	*
	Development of primers for amplifying genes encoding CprA- and PceA-like reductive dehalogenases in anaerobic microbial consortia, dechlorinating trichlorobenzene and 1,2-dichloropropane.	von Wintzingerode F, Schlotelburg C, Hauck R, Hegemann W, Gobel UB	FEMS Microbiol Ecol	10.1016/s0168-6496(01)00093-9	2001	*

References

#3914

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 10344

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#80981

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID48816.1 )

* These data were automatically processed and therefore are not curated

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