Haemophilus influenzae 572 is a microaerophile, mesophilic, Gram-negative prokaryote of the family Pasteurellaceae.
Gram-negative rod-shaped microaerophile mesophilic genome sequence| @ref 20215 |
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| Domain Pseudomonadati |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Pasteurellales |
| Family Pasteurellaceae |
| Genus Haemophilus |
| Species Haemophilus influenzae |
| Full scientific name Haemophilus influenzae corrig. (Lehmann and Neumann 1896) Winslow et al. 1917 (Approved Lists 1980) |
| Synonyms (2) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 4561 | COLUMBIA BLOOD AGAR (DSMZ Medium 429) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD AGAR (DSMZ Medium 429) Composition: Horse blood 40.0 g/l Columbia agar base | ||
| 4561 | HAEMOPHILUS MEDIUM (DSMZ Medium 804) | Medium recipe at MediaDive | Name: HAEMOPHILUS MEDIUM (DSMZ Medium 804) Composition: Mueller-Hinton broth 21.0 g/l Yeast extract 5.0 g/l Distilled water | ||
| 41778 | MEDIUM 10 - Chocolate medium for Actinobacillus pleuropneumoniae, Capnocytophaga cynodegmi, Haemophilus and Neisseria | Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml);PolyVitex mischung (10.000 ml) | |||
| 120110 | CIP Medium 10 | Medium recipe at CIP |
| @ref | Salt | Growth | Tested relation | Concentration | |
|---|---|---|---|---|---|
| 120110 | NaCl | positive | growth | 2 % |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 120110 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 120110 | beta-galactosidase | - | 3.2.1.23 | |
| 68377 | beta-galactosidase | - | 3.2.1.23 | from API NH |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 4561 | catalase | + | 1.11.1.6 | |
| 120110 | catalase | - | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | - | from API zym | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 120110 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 120110 | ornithine decarboxylase | + | 4.1.1.17 | |
| 120110 | oxidase | - | ||
| 68377 | proline-arylamidase | - | 3.4.11.5 | from API NH |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 120110 | urease | + | 3.5.1.5 | |
| 68382 | valine arylamidase | - | from API zym |
| Metadata FA analysis | ||||||||||||||||||||||||||||||||||||||||
| type of FA analysis | whole cell analysis | |||||||||||||||||||||||||||||||||||||||
| method/protocol | CCUG | |||||||||||||||||||||||||||||||||||||||
| @ref | 51728 | |||||||||||||||||||||||||||||||||||||||
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| @ref | PEN | GLU | FRU | MAL | SAC | ODC | URE | LIP | PAL | beta GAL | ProA | GGT | IND | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4561 | + | + | + | + | + | + | - | + | - | - | - | + | - | |
| 4561 | + | +/- | - | - | + | + | - | + | - | - | - | + | - | |
| 4561 | + | +/- | - | - | - | + | - | + | - | - | - | + | - | |
| 4561 | + | + | - | - | + | + | - | + | - | - | - | + | - | |
| 4561 | - | + | +/- | - | - | + | + | - | + | - | - | - | + | |
| 4561 | - | + | + | - | - | + | + | - | + | - | - | - | + | |
| 4561 | - | + | +/- | - | - | - | + | - | + | - | - | - | + | |
| 4561 | - | + | + | + | + | + | + | - | + | - | - | - | + | |
| 4561 | - | + | +/- | - | - | + | + | - | + | - | - | - | + |
| @ref | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|
| 4561 | USA | USA | North America |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|
| 66792 | ASM199735v1 assembly for Haemophilus influenzae ATCC 10211 | scaffold | 727 | 69.71 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 97.70 | no |
| 125439 | motility | BacteriaNetⓘ | no | 68.20 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 98.00 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 98.40 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 97.92 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 96.56 | yes |
| 125438 | aerobic | aerobicⓘ | no | 91.17 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 92.17 | no |
| 125438 | thermophilic | thermophileⓘ | no | 96.94 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 94.66 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Stability of influenza A virus in droplets and aerosols is heightened by the presence of commensal respiratory bacteria. | David SC, Schaub A, Terrettaz C, Motos G, Costa LJ, Nolan DS, Augugliaro M, Wynn HK, Glas I, Pohl MO, Klein LK, Luo B, Bluvshtein N, Violaki K, Hugentobler W, Krieger UK, Peter T, Stertz S, Nenes A, Kohn T. | J Virol | 10.1128/jvi.00409-24 | 2024 | ||
| Immunological efficiency of Haemophilus influenzae type b polyribosyl ribitol phosphate combined with detoxified lipooligosaccharide in a rabbit model | Arsang A, Siadat S, Saberpour M, Nojoomi F. | Iran J Microbiol | 2025 | |||
| Design of New Primer Sets for the Development of a Loop-Mediated Isothermal Amplification for Rapid Detection of Neisseria meningitidis. | Vo CV, Nguyen TT, Ngo HT, Bui LAT, Trinh TV, Vu LT, Hoang HD, Truong PQ. | Curr Issues Mol Biol | 10.3390/cimb47060467 | 2025 | ||
| Genetics | Comparative genomic study of non-typeable Haemophilus influenzae in children with pneumonia and healthy controls. | Zhang D, Wang W, Song C, Huang T, Chen H, Liu Z, Zhou Y, Wang H. | iScience | 10.1016/j.isci.2024.111330 | 2024 | |
| REGECEL (an Oxidized Regenerated Cellulose) Provides Superior Bioactivity Effect on Microorganisms. | Alhetheel AF, Alrfaei BM, Mujamammi AH, Hakami JA, Alshuhri AA. | Infect Drug Resist | 10.2147/idr.s454539 | 2024 | ||
| Use of Blood Powder (Ground and Irradiated) for the Manufacture of Chocolate Agar. | Casino P, Lopez A, Peiro S, Terrones I, Agusti G, Terlevich D, Asensio D, Marques AM, Pique N. | Int J Mol Sci | 10.3390/ijms24097965 | 2023 | ||
| Expanded Gram-Negative Activity of Marinopyrrole A. | Euteneuer CF, Davis BN, Lui LM, Neville AJ, Davis PH. | Pathogens | 10.3390/pathogens14030290 | 2025 | ||
| Typeable ampicillin-resistant Haemophilus influenzae strains in Tunisian's children. | Mzilem S, Boukhchina S. | Medicine (Baltimore) | 10.1097/md.0000000000030713 | 2022 | ||
| Phylogeny | Comparative Genomic Analysis Reveals Genetic Diversity and Pathogenic Potential of Haemophilus seminalis and Emended Description of Haemophilus seminalis. | Chen X, Zhang H, Feng J, Zhang L, Zheng M, Luo H, Zhuo H, Xu N, Zhang X, Chen C, Qu P, Li Y. | Microbiol Spectr | 10.1128/spectrum.04772-22 | 2023 | |
| Development of a diagnostic assay by three-tube multiplex real-time PCR for simultaneous detection of nine microorganisms causing acute respiratory infections. | Jiang XW, Huang TS, Xie L, Chen SZ, Wang SD, Huang ZW, Li XY, Ling WP. | Sci Rep | 10.1038/s41598-022-15543-6 | 2022 | ||
| Enzymology | Development of novel isatin-nicotinohydrazide hybrids with potent activity against susceptible/resistant Mycobacterium tuberculosis and bronchitis causing-bacteria. | Elsayed ZM, Eldehna WM, Abdel-Aziz MM, El Hassab MA, Elkaeed EB, Al-Warhi T, Abdel-Aziz HA, Abou-Seri SM, Mohammed ER. | J Enzyme Inhib Med Chem | 10.1080/14756366.2020.1868450 | 2021 | |
| Rapid, Low-Complexity, Simultaneous Bacterial Group Identification and Antimicrobial Susceptibility Testing Performed Directly on Positive Blood Culture Bottles Using Chromogenic Agar. | Robberts FJL, Owusu-Ofori A, Oduro G, Gyampomah TK, Marles N, Fox AT, Chenoweth JG, Schully KL, Clark DV. | Am J Trop Med Hyg | 10.4269/ajtmh.22-0278 | 2022 | ||
| Investigation of Upper Respiratory Carriage of Bacterial Pathogens among University Students in Kampar, Malaysia. | Ong HH, Toh WK, Thong LY, Phoon LQ, Clarke SC, Cheah ESG. | Trop Med Infect Dis | 10.3390/tropicalmed8050269 | 2023 | ||
| The potential of wastewater monitoring as a novel surveillance tool for early warning of Bordetella pertussis outbreaks. | Fu S, Du X, Xu Z, Li H, Yao H, Tang S, Zhao W, Hao M, Qiu Z, Wang Z. | Emerg Microbes Infect | 10.1080/22221751.2025.2528537 | 2025 | ||
| Antimicrobial proteins from oyster hemolymph improve the efficacy of conventional antibiotics. | Summer K, Guo Q, Liu L, Barkla B, Giles S, Benkendorff K. | PLoS One | 10.1371/journal.pone.0312305 | 2025 | ||
| Rapid and direct molecular detection of Streptococcus pneumoniae and Haemophilus influenzae isolated in oropharynx and nasal cavity of children. | Maleki A, Mansournia F, Ghafourian S, Taherikalani M, Pakzad I, Mohammadi J, Kouhsari E, Mahmoudi M, Sadeghifard N. | New Microbes New Infect | 10.1016/j.nmni.2019.100632 | 2020 | ||
| Polymorphism of ftsI gene in Haemophilus influenzae and emergence of cefotaxime resistance in two Tunisian hospitals. | Ferjani S, Sassi I, Saidani M, Mhiri E, Ghariani A, Boutiba Ben Boubaker I, Slim L, Amine S. | New Microbes New Infect | 10.1016/j.nmni.2020.100690 | 2020 | ||
| A novel, rapid, ultrasensitive diagnosis platform for detecting Candida albicans using restriction endonuclease-mediated real-time loop-mediated isothermal amplification. | Wang Y, Zhou Y, Lu J, Yu H, Wang Y. | Front Cell Infect Microbiol | 10.3389/fcimb.2024.1450199 | 2024 | ||
| Phylogeny | Multicenter Hospital-Based Prospective Surveillance Study of Bacterial Agents Causing Meningitis and Seroprevalence of Different Serogroups of Neisseria meningitidis, Haemophilus influenzae Type b, and Streptococcus pneumoniae during 2015 to 2018 in Turkey. | Ceyhan M, Ozsurekci Y, Tanir Basaranoglu S, Gurler N, Sali E, Keser Emiroglu M, Oz FN, Belet N, Duman M, Ulusoy E, Kurugol Z, Tezer H, Ozkaya Parlakay A, Dinleyici EC, Celik U, Celebi S, Oner AF, Solmaz MA, Karbuz A, Hatipoglu N, Devrim I, Caglar I, Bozdemir SE, Kocabas E, Gundeslioglu OO, Sutcu M, Metin Akcan O, Kuyucu N, Aktar F, Kara SS, Altay Akisoglu HO, Tuygun N, Tamburaci Uslu ZD, Karadag Oncel E, Bayhan C, Cengiz AB. | mSphere | 10.1128/msphere.00060-20 | 2020 | |
| A multi-enzyme machine polymerizes the Haemophilus influenzae type b capsule. | Cifuente JO, Schulze J, Bethe A, Di Domenico V, Litschko C, Budde I, Eidenberger L, Thiesler H, Ramon Roth I, Berger M, Claus H, D'Angelo C, Marina A, Gerardy-Schahn R, Schubert M, Guerin ME, Fiebig T. | Nat Chem Biol | 10.1038/s41589-023-01324-3 | 2023 | ||
| Enzymology | Detection of Haemophilus influenzae type b, Streptococcus agalactiae, Streptococcus pneumoniae and Neisseria meningitidis in CSF specimens of children suspicious of Meningitis in Ahvaz, Iran. | Amin M, Ghaderpanah M, Navidifar T. | Kaohsiung J Med Sci | 10.1016/j.kjms.2016.08.009 | 2016 | |
| Prevalence of susceptibility patterns of opportunistic bacteria in line with CLSI or EUCAST among Haemophilus parainfluenzae isolated from respiratory microbiota. | Kosikowska U, Andrzejczuk S, Grywalska E, Chwiejczak E, Winiarczyk S, Pietras-Ozga D, Stepien-Pysniak D. | Sci Rep | 10.1038/s41598-020-68161-5 | 2020 | ||
| Genetics | hicap: In Silico Serotyping of the Haemophilus influenzae Capsule Locus. | Watts SC, Holt KE. | J Clin Microbiol | 10.1128/jcm.00190-19 | 2019 | |
| Pathogenicity | Influence of Thiazolidine-2,4-Dione Derivatives with Azolidine or Thiosemicarbazone Moieties on Haemophilus spp. Planktonic or Biofilm-Forming Cells. | Trotsko N, Kosikowska U, Andrzejczuk S, Paneth A, Wujec M. | Molecules | 10.3390/molecules24061051 | 2019 | |
| Thiazolidin-4-Ones as a Promising Scaffold in the Development of Antibiofilm Agents-A Review. | Trotsko N. | Int J Mol Sci | 10.3390/ijms25010325 | 2023 | ||
| Enzymology | Duplex Quantitative PCR Assay for Detection of Haemophilus influenzae That Distinguishes Fucose- and Protein D-Negative Strains. | de Gier C, Pickering JL, Richmond PC, Thornton RB, Kirkham LA. | J Clin Microbiol | 10.1128/jcm.00982-16 | 2016 | |
| Metabolism | Cell vacuolation induced by Haemophilus influenzae supernatants in HEp-2 cells. | Espinoza-Mellado Mdel R, Lopez-Villegas EO, Arteaga-Garibay RI, Giono-Cerezo S. | Mem Inst Oswaldo Cruz | 10.1590/0074-0276130716 | 2013 | |
| Chemical and Biological Properties of Different Romanian Populations of Hyssopus officinalis Correlated via Molecular Docking. | Imbrea IM, Osiceanu M, Hulea A, Suleiman MA, Popescu I, Floares Oarga D, Onisan E, Neacsu AG, Popescu CA, Hulea C, Pop G, Nita S, Imbrea F, Obistioiu D. | Plants (Basel) | 10.3390/plants13223259 | 2024 | ||
| Enzymology | Evaluation of Liquid-Based Swab Transport Systems against the New Approved CLSI M40-A2 Standard. | Gizzie N, Adukwu E. | J Clin Microbiol | 10.1128/jcm.03337-15 | 2016 | |
| Microbiological Characterization of Haemophilus influenzae Isolated from Patients with Lower Respiratory Tract Infections in a Tertiary Care Hospital, South India. | Shenoy PA, Chawla K, Vishwanath S, Shaw D. | J Clin Diagn Res | 10.7860/jcdr/2016/18612.7892 | 2016 | ||
| Boswellia Essential Oil: Natural Antioxidant as an Effective Antimicrobial and Anti-Inflammatory Agent. | Obistioiu D, Hulea A, Cocan I, Alexa E, Negrea M, Popescu I, Herman V, Imbrea IM, Heghedus-Mindru G, Suleiman MA, Radulov I, Imbrea F. | Antioxidants (Basel) | 10.3390/antiox12101807 | 2023 | ||
| Applying Central Composite Design and Response Surface Methodology to Optimize Growth and Biomass Production of Haemophilus influenzae Type b. | Momen SB, Siadat SD, Akbari N, Ranjbar B, Khajeh K. | Jundishapur J Microbiol | 10.5812/jjm.25246 | 2016 | ||
| Romanian Bee Product Analysis: Chemical Composition, Antimicrobial Activity, and Molecular Docking Insights. | Patruica S, Adeiza SM, Hulea A, Alexa E, Cocan I, Moraru D, Imbrea I, Floares D, Pet I, Imbrea F, Obistioiu D. | Foods | 10.3390/foods13101455 | 2024 | ||
| Analysing the Antibacterial Synergistic Interactions of Romanian Lavender Essential Oils via Gas Chromatography-Mass Spectrometry: In Vitro and In Silico Approaches. | Balasoiu Jigau RAC, Obistioiu D, Hulea A, Suleiman MA, Popescu I, Floares Oarga D, Imbrea IM, Neacsu AG, Smuleac L, Pascalau R, Crista L, Popescu CA, Samfira I, Imbrea F. | Plants (Basel) | 10.3390/plants13152136 | 2024 | ||
| An emm-type specific qPCR to track bacterial load during experimental human Streptococcus pyogenes pharyngitis. | Fabri LV, Azzopardi KI, Osowicki J, Frost HR, Smeesters PR, Steer AC. | BMC Infect Dis | 10.1186/s12879-021-06173-w | 2021 | ||
| Enzymology | Time-to-detection of bacteria and yeast with the BACTEC FX versus BacT/Alert Virtuo blood culture systems. | Somily AM, Habib HA, Torchyan AA, Sayyed SB, Absar M, Al-Aqeel R, Binkhamis AK. | Ann Saudi Med | 10.5144/0256-4947.2018.194 | 2018 | |
| Candida auris Direct Detection from Surveillance Swabs, Blood, and Urine Using a Laboratory-Developed PCR Method. | Walchak RC, Buckwalter SP, Zinsmaster NM, Henn KM, Johnson KM, Koelsch JM, Herring SA, Steinmetz LK, Reed KA, Barth JE, Rasmusson JM, Fischer JL, Snippes Vagnone P, Sampathkumar P, Wengenack NL. | J Fungi (Basel) | 10.3390/jof6040224 | 2020 | ||
| Comparative in vitro evaluation of the antimicrobial activities of povidone-iodine and other commercially available antiseptics against clinically relevant pathogens. | Tan EL, Johari NH. | GMS Hyg Infect Control | 10.3205/dgkh000376 | 2021 | ||
| Emergence of Haemophilus influenzae Strains in the Nasopharynx of Children with Tuberculosis. | Martynova AV, Balabanova LA, Pruschinskyi A. | Pulm Med | 10.1155/2011/420284 | 2011 | ||
| Inhibitory effect of N-ethyl-3-amino-5-oxo-4-phenyl-2,5-dihydro-1H-pyrazole-1-carbothioamide on Haemophilus spp. planktonic or biofilm-forming cells. | Kosikowska U, Malm A, Pitucha M, Rajtar B, Polz-Dacewicz M. | Med Chem Res | 10.1007/s00044-013-0700-7 | 2014 | ||
| Diversity of Monofloral Honey Based on the Antimicrobial and Antioxidant Potential. | Hulea A, Obistioiu D, Cocan I, Alexa E, Negrea M, Neacsu AG, Hulea C, Pascu C, Costinar L, Iancu I, Tirziu E, Herman V. | Antibiotics (Basel) | 10.3390/antibiotics11050595 | 2022 | ||
| Evaluation of Metagenomic and Targeted Next-Generation Sequencing Workflows for Detection of Respiratory Pathogens from Bronchoalveolar Lavage Fluid Specimens. | Gaston DC, Miller HB, Fissel JA, Jacobs E, Gough E, Wu J, Klein EY, Carroll KC, Simner PJ. | J Clin Microbiol | 10.1128/jcm.00526-22 | 2022 | ||
| Pathogenicity | Nasopharyngeal carriage and antimicrobial susceptibility of Haemophilus influenzae among children younger than 5 years of age in Beijing, China. | Zhu H, Wang A, Tong J, Yuan L, Gao W, Shi W, Yu S, Yao K, Yang Y. | BMC Microbiol | 10.1186/s12866-015-0350-7 | 2015 | |
| Chemical Constituents and Their Biological Activities from Genus Styrax. | Xia DD, Han XY, Zhang Y, Zhang N. | Pharmaceuticals (Basel) | 10.3390/ph16071043 | 2023 | ||
| Enzymology | Rapid Detection of Methicillin-Resistant Staphylococcus aureus and Methicillin-Susceptible S. aureus Directly from Positive Blood Cultures by Use of the BD Max StaphSR Assay. | Ellem JA, Olma T, O'Sullivan MV. | J Clin Microbiol | 10.1128/jcm.02155-15 | 2015 | |
| Population density profiles of nasopharyngeal carriage of 5 bacterial species in pre-school children measured using quantitative PCR offer potential insights into the dynamics of transmission. | Thors V, Morales-Aza B, Pidwill G, Vipond I, Muir P, Finn A. | Hum Vaccin Immunother | 10.1080/21645515.2015.1090069 | 2016 | ||
| Phylogeny | Characterization of indigenous lactobacillus strains for probiotic properties. | Mojgani N, Hussaini F, Vaseji N. | Jundishapur J Microbiol | 10.5812/jjm.17523 | 2015 | |
| Impact of delays to incubation and storage temperature on blood culture results: a multi-centre study. | Ling CL, Roberts T, Soeng S, Cusack TP, Dance DAB, Lee SJ, Reed TAN, Hinfonthong P, Sihalath S, Sengduangphachanh A, Watthanaworawit W, Wangrangsimakul T, Newton PN, Nosten FH, Turner P, Ashley EA. | BMC Infect Dis | 10.1186/s12879-021-05872-8 | 2021 | ||
| Pathogenicity | Growth-altering microbial interactions are responsive to chemical context. | Liu A, Archer AM, Biggs MB, Papin JA. | PLoS One | 10.1371/journal.pone.0164919 | 2017 | |
| Phylogeny | Bacterial agents causing meningitis during 2013-2014 in Turkey: A multi-center hospital-based prospective surveillance study. | Ceyhan M, Ozsurekci Y, Gurler N, Karadag Oncel E, Camcioglu Y, Salman N, Celik M, Emiroglu MK, Akin F, Tezer H, Parlakay AO, Tuygun N, Tamburaci D, Dinleyici EC, Karbuz A, Uluca U, Alhan E, Cay U, Kurugol Z, Hatipoglu N, Siraneci R, Ince T, Sensoy G, Belet N, Coskun E, Yilmaz F, Hacimustafaoglu M, Celebi S, Celik U, Ozen M, Akaslan A, Devrim I, Kuyucu N, Oz F, Bozdemir SE, Kara A. | Hum Vaccin Immunother | 10.1080/21645515.2016.1209278 | 2016 | |
| A versatile assay to determine bacterial and host factors contributing to opsonophagocytotic killing in hirudin-anticoagulated whole blood. | van der Maten E, de Jonge MI, de Groot R, van der Flier M, Langereis JD. | Sci Rep | 10.1038/srep42137 | 2017 | ||
| Pathogenicity | Effects of various media on the activity of NXL103 (formerly XRP 2868), a new oral streptogramin, against Haemophilus influenzae. | Pankuch GA, Hoellman D, Bryskier A, Lowther J, Appelbaum PC. | Antimicrob Agents Chemother | 10.1128/aac.00587-06 | 2006 | |
| Chemical Composition, Antioxidant and Antimicrobial Activity of Some Types of Honey from Banat Region, Romania. | Patruica S, Alexa E, Obistioiu D, Cocan I, Radulov I, Berbecea A, Lazar RN, Simiz E, Vicar NM, Hulea A, Moraru D. | Molecules | 10.3390/molecules27134179 | 2022 | ||
| rpoB Targeted Loop-Mediated Isothermal Amplification (LAMP) Assay for Consensus Detection of Mycobacteria Associated With Pulmonary Infections. | Grandjean Lapierre S, Drancourt M. | Front Med (Lausanne) | 10.3389/fmed.2018.00332 | 2018 | ||
| Evaluation of amplification targets for the specific detection of Bordetella pertussis using real-time polymerase chain reaction. | Hasan MR, Tan R, Al-Rawahi GN, Thomas E, Tilley P. | Can J Infect Dis Med Microbiol | 10.1155/2014/763128 | 2014 | ||
| Pathogenicity | First characterization of heterogeneous resistance to imipenem in invasive nontypeable Haemophilus influenzae isolates. | Cerquetti M, Giufre M, Cardines R, Mastrantonio P. | Antimicrob Agents Chemother | 10.1128/aac.00335-07 | 2007 | |
| Phylogeny | Novel micelle PCR-based method for accurate, sensitive and quantitative microbiota profiling. | Boers SA, Hays JP, Jansen R. | Sci Rep | 10.1038/srep45536 | 2017 | |
| Pathogenicity | Potent and broad-spectrum antibacterial activity of indole-based bisamidine antibiotics: synthesis and SAR of novel analogs of MBX 1066 and MBX 1090. | Williams JD, Nguyen ST, Gu S, Ding X, Butler MM, Tashjian TF, Opperman TJ, Panchal RG, Bavari S, Peet NP, Moir DT, Bowlin TL. | Bioorg Med Chem | 10.1016/j.bmc.2013.10.014 | 2013 | |
| Generation of recombinant hyperimmune globulins from diverse B-cell repertoires. | Keating SM, Mizrahi RA, Adams MS, Asensio MA, Benzie E, Carter KP, Chiang Y, Edgar RC, Gautam BK, Gras A, Leong J, Leong R, Lim YW, Manickam VA, Medina-Cucurella AV, Niedecken AR, Saini J, Simons JF, Spindler MJ, Stadtmiller K, Tinsley B, Wagner EK, Wayham N, Tracy L, Lundberg CV, Buscher D, Terencio JV, Roalfe L, Pearce E, Richardson H, Goldblatt D, Ramjag AT, Carrington CVF, Simmons G, Muench MO, Chamow SM, Monroe B, Olson C, Oguin TH, Lynch H, Jeanfreau R, Mosher RA, Walch MJ, Bartley CR, Ross CA, Meyer EH, Adler AS, Johnson DS. | Nat Biotechnol | 10.1038/s41587-021-00894-8 | 2021 | ||
| Comparative study of bacteriological culture and real-time fluorescence quantitative PCR (RT-PCR) and multiplex PCR-based reverse line blot (mPCR/RLB) hybridization assay in the diagnosis of bacterial neonatal meningitis. | Wang Y, Guo G, Wang H, Yang X, Shao F, Yang C, Gao W, Shao Z, Zhang J, Luo J, Yang Y, Kong F, Zhu B. | BMC Pediatr | 10.1186/1471-2431-14-224 | 2014 | ||
| Metabolism | Two-component systems in Haemophilus influenzae: a regulatory role for ArcA in serum resistance. | De Souza-Hart JA, Blackstock W, Di Modugno V, Holland IB, Kok M. | Infect Immun | 10.1128/iai.71.1.163-172.2003 | 2003 | |
| Phylogeny | Polymorphism in ftsI gene and {beta}-lactam susceptibility in Portuguese Haemophilus influenzae strains: clonal dissemination of beta-lactamase-positive isolates with decreased susceptibility to amoxicillin/clavulanic acid. | Barbosa AR, Giufre M, Cerquetti M, Bajanca-Lavado MP. | J Antimicrob Chemother | 10.1093/jac/dkq533 | 2011 | |
| Natural Preparations Based on Orange, Bergamot and Clove Essential Oils and Their Chemical Compounds as Antimicrobial Agents. | Alexa VT, Szuhanek C, Cozma A, Galuscan A, Borcan F, Obistioiu D, Dehelean CA, Jumanca D. | Molecules | 10.3390/molecules25235502 | 2020 | ||
| Comparison of culture and real-time PCR for detection of Bordetella pertussis isolated from patients in Iran. | Nikbin VS, Shahcheraghi F, Lotfi MN, Zahraei SM, Parzadeh M. | Iran J Microbiol | 2013 | |||
| Phylogeny | Haemophilus influenzae carriage in children attending French day care centers: a molecular epidemiological study. | Dabernat H, Plisson-Saune MA, Delmas C, Seguy M, Faucon G, Pelissier R, Carsenti H, Pradier C, Roussel-Delvallez M, Leroy J, Dupont MJ, De Bels F, Dellamonica P. | J Clin Microbiol | 10.1128/jcm.41.4.1664-1672.2003 | 2003 | |
| Enzymology | Molecular epidemiological study of Haemophilus influenzae serotype b strains obtained from children with meningitis in Japan. | Mitsuda T, Kuroki H, Ishikawa N, Imagawa T, Ito S, Miyamae T, Mori M, Uehara S, Yokota S. | J Clin Microbiol | 10.1128/jcm.37.8.2548-2552.1999 | 1999 | |
| Depletion of Human DNA in Spiked Clinical Specimens for Improvement of Sensitivity of Pathogen Detection by Next-Generation Sequencing. | Hasan MR, Rawat A, Tang P, Jithesh PV, Thomas E, Tan R, Tilley P. | J Clin Microbiol | 10.1128/jcm.03050-15 | 2016 | ||
| Phylogeny | Two-step scheme for rapid identification and differentiation of Legionella pneumophila and non-Legionella pneumophila species. | Zhan XY, Li LQ, Hu CH, Zhu QY. | J Clin Microbiol | 10.1128/jcm.01778-09 | 2010 | |
| Monitoring of microbial dynamics in a drinking water distribution system using the culture-free, user-friendly, MYcrobiota platform. | Boers SA, Prest EI, Taucer-Kapteijn M, Knezev A, Schaap PG, Hays JP, Jansen R. | Sci Rep | 10.1038/s41598-018-32987-x | 2018 | ||
| Pathogenicity | In Vitro Antibacterial Properties of Cefiderocol, a Novel Siderophore Cephalosporin, against Gram-Negative Bacteria. | Ito A, Sato T, Ota M, Takemura M, Nishikawa T, Toba S, Kohira N, Miyagawa S, Ishibashi N, Matsumoto S, Nakamura R, Tsuji M, Yamano Y. | Antimicrob Agents Chemother | 10.1128/aac.01454-17 | 2018 | |
| A prospective study of etiology of childhood acute bacterial meningitis, Turkey. | Ceyhan M, Yildirim I, Balmer P, Borrow R, Dikici B, Turgut M, Kurt N, Aydogan A, Ecevit C, Anlar Y, Gulumser O, Tanir G, Salman N, Gurler N, Hatipoglu N, Hacimustafaoglu M, Celebi S, Coskun Y, Alhan E, Celik U, Camcioglu Y, Secmeer G, Gur D, Gray S. | Emerg Infect Dis | 10.3201/eid1407.070938 | 2008 | ||
| Evaluation of swab transport systems against a published standard. | Human RP, Jones GA. | J Clin Pathol | 10.1136/jcp.2004.016725 | 2004 | ||
| Enzymology | Rapid detection of Brucella spp. in blood cultures by fluorescence in situ hybridization. | Wellinghausen N, Nockler K, Sigge A, Bartel M, Essig A, Poppert S. | J Clin Microbiol | 10.1128/jcm.44.5.1828-1830.2006 | 2006 | |
| Characteristics of Haemophilus influenzae type b responsible for meningitis in Poland from 1997 to 2004. | Skoczynska A, Kadlubowski M, Empel J, Hryniewicz W. | J Clin Microbiol | 10.1128/jcm.43.11.5665-5669.2005 | 2005 | ||
| Meningitis caused by Neisseria Meningitidis, Hemophilus Influenzae Type B and Streptococcus Pneumoniae during 2005-2012 in Turkey. A multicenter prospective surveillance study. | Ceyhan M, Gurler N, Ozsurekci Y, Keser M, Aycan AE, Gurbuz V, Salman N, Camcioglu Y, Dinleyici EC, Ozkan S, Sensoy G, Belet N, Alhan E, Hacimustafaoglu M, Celebi S, Uzun H, Faik Oner A, Kurugol Z, Ali Tas M, Aygun D, Karadag Oncel E, Celik M, Yasa O, Akin F, Coskun Y. | Hum Vaccin Immunother | 10.4161/hv.29678 | 2014 | ||
| Phylogeny | Comparison of Illumina versus Nanopore 16S rRNA Gene Sequencing of the Human Nasal Microbiota. | Heikema AP, Horst-Kreft D, Boers SA, Jansen R, Hiltemann SD, de Koning W, Kraaij R, de Ridder MAJ, van Houten CB, Bont LJ, Stubbs AP, Hays JP. | Genes (Basel) | 10.3390/genes11091105 | 2020 | |
| Phylogeny | Development and evaluation of a culture-free microbiota profiling platform (MYcrobiota) for clinical diagnostics. | Boers SA, Hiltemann SD, Stubbs AP, Jansen R, Hays JP. | Eur J Clin Microbiol Infect Dis | 10.1007/s10096-018-3220-z | 2018 | |
| Enzymology | Invasive type e Haemophilus influenzae disease in Italy. | Cerquetti M, Ciofi degli Atti ML, Cardines R, Salmaso S, Renna G, Mastrantonio P, Hi Study Group. | Emerg Infect Dis | 10.3201/eid0902.020142 | 2003 | |
| A Simple and Safe Protocol for Preparing Brucella Samples for Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry Analysis. | Mesureur J, Ranaldi S, Monnin V, Girard V, Arend S, Welker M, O'Callaghan D, Lavigne JP, Keriel A. | J Clin Microbiol | 10.1128/jcm.02730-15 | 2016 | ||
| Pathogenicity | Diversity of beta-lactam resistance-conferring amino acid substitutions in penicillin-binding protein 3 of Haemophilus influenzae. | Dabernat H, Delmas C, Seguy M, Pelissier R, Faucon G, Bennamani S, Pasquier C. | Antimicrob Agents Chemother | 10.1128/aac.46.7.2208-2218.2002 | 2002 | |
| Pathogenicity | Antimicrobial activities and postantibiotic effects of clarithromycin, 14-hydroxy-clarithromycin, and azithromycin in epithelial cell lining fluid against clinical isolates of haemophilus influenzae and Streptococcus pneumoniae. | Bergman KL, Olsen KM, Peddicord TE, Fey PD, Rupp ME. | Antimicrob Agents Chemother | 10.1128/aac.43.5.1291 | 1999 | |
| Metabolism | Development of a real-time resistance measurement for Vibrio parahaemolyticus detection by the lecithin-dependent hemolysin gene. | Xiang G, Pu X, Jiang D, Liu L, Liu C, Liu X. | PLoS One | 10.1371/journal.pone.0072342 | 2013 | |
| Enzymology | Development and evaluation of real-time PCR assays for the detection of the newly identified KI and WU polyomaviruses. | Bialasiewicz S, Whiley DM, Lambert SB, Gould A, Nissen MD, Sloots TP. | J Clin Virol | 10.1016/j.jcv.2007.07.015 | 2007 | |
| Phylogeny | Characterization of non-type B Haemophilus influenzae strains isolated from patients with invasive disease. The HI Study Group. | Cerquetti M, Ciofi degli Atti ML, Renna G, Tozzi AE, Garlaschi ML, Mastrantonio P. | J Clin Microbiol | 10.1128/jcm.38.12.4649-4652.2000 | 2000 | |
| Antibiotics Drive Expansion of Rare Pathogens in a Chronic Infection Microbiome Model. | Varga JJ, Zhao CY, Davis JD, Hao Y, Farrell JM, Gurney JR, Voit E, Brown SP. | mSphere | 10.1128/msphere.00318-22 | 2022 | ||
| Pathogenicity | Antimicrobial resistance among respiratory pathogens in Spain: latest data and changes over 11 years (1996-1997 to 2006-2007). | Perez-Trallero E, Martin-Herrero JE, Mazon A, Garcia-Delafuente C, Robles P, Iriarte V, Dal-Re R, Garcia-de-Lomas J, Spanish Surveillance Group for Respiratory Pathogens. | Antimicrob Agents Chemother | 10.1128/aac.01548-09 | 2010 | |
| Pathogenicity | Activities of ceftobiprole, a novel broad-spectrum cephalosporin, against Haemophilus influenzae and Moraxella catarrhalis. | Bogdanovich T, Clark C, Ednie L, Lin G, Smith K, Shapiro S, Appelbaum PC. | Antimicrob Agents Chemother | 10.1128/aac.00044-06 | 2006 | |
| Pathogenicity | Determination of antimicrobial susceptibilities of Canadian isolates of Haemophilus influenzae and characterization of their beta-lactamases. Canadian Haemophilus Study Group. | Scriver SR, Walmsley SL, Kau CL, Hoban DJ, Brunton J, McGeer A, Moore TC, Witwicki E. | Antimicrob Agents Chemother | 10.1128/aac.38.7.1678 | 1994 | |
| Pathogenicity | Activity of the streptogramin antibiotic etamycin against methicillin-resistant Staphylococcus aureus. | Haste NM, Perera VR, Maloney KN, Tran DN, Jensen P, Fenical W, Nizet V, Hensler ME. | J Antibiot (Tokyo) | 10.1038/ja.2010.22 | 2010 | |
| Pathogenicity | In vitro susceptibility testing of Haemophilus influenzae: review of new National Committee for Clinical Laboratory Standards recommendations. | Doern GV. | J Clin Microbiol | 10.1128/jcm.30.12.3035-3038.1992 | 1992 | |
| Antimicrobial Potential of the Genera Geobacillus and Parageobacillus, as Well as Endolysins Biosynthesized by Their Bacteriophages. | Zebrowska J, Witkowska M, Struck A, Laszuk PE, Raczuk E, Ponikowska M, Skowron PM, Zylicz-Stachula A. | Antibiotics (Basel) | 10.3390/antibiotics11020242 | 2022 | ||
| Rapid PCR Detection of Mycoplasma hominis, Ureaplasma urealyticum, and Ureaplasma parvum. | Cunningham SA, Mandrekar JN, Rosenblatt JE, Patel R. | Int J Bacteriol | 10.1155/2013/168742 | 2013 | ||
| Enzymology | Comparison of Easy-Flow Copan Liquid Stuart's and Starplex Swab transport systems for recovery of fastidious aerobic bacteria. | Drake C, Barenfanger J, Lawhorn J, Verhulst S. | J Clin Microbiol | 10.1128/jcm.43.3.1301-1303.2005 | 2005 | |
| Measuring nasal bacterial load and its association with otitis media. | Smith-Vaughan H, Byun R, Nadkarni M, Jacques NA, Hunter N, Halpin S, Morris PS, Leach AJ. | BMC Ear Nose Throat Disord | 10.1186/1472-6815-6-10 | 2006 | ||
| Performance of Haemophilus Test Media prepared with 12 different lots of Mueller-Hinton agar from four manufacturers. | Barry AL, Packer RR. | J Clin Microbiol | 10.1128/jcm.30.5.1145-1147.1992 | 1992 | ||
| Synthesis and Antibacterial Activity of New Thiazolidine-2,4-dione-Based Chlorophenylthiosemicarbazone Hybrids. | Trotsko N, Kosikowska U, Paneth A, Plech T, Malm A, Wujec M. | Molecules | 10.3390/molecules23051023 | 2018 | ||
| Metabolism | Bactobolin resistance is conferred by mutations in the L2 ribosomal protein. | Chandler JR, Truong TT, Silva PM, Seyedsayamdost MR, Carr G, Radey M, Jacobs MA, Sims EH, Clardy J, Greenberg EP. | mBio | 10.1128/mbio.00499-12 | 2012 | |
| Metabolism | Influence of four modes of administration on penetration of aztreonam, cefuroxime, and ampicillin into interstitial fluid and fibrin clots and on in vivo efficacy against Haemophilus influenzae. | Lavoie GY, Bergeron MG. | Antimicrob Agents Chemother | 10.1128/aac.28.3.404 | 1985 | |
| Enzymology | Microbiological evaluation of the new VITEK 2 Neisseria-Haemophilus identification card. | Valenza G, Ruoff C, Vogel U, Frosch M, Abele-Horn M. | J Clin Microbiol | 10.1128/jcm.00953-07 | 2007 | |
| Simultaneous identification of 14 genital microorganisms in urine by use of a multiplex PCR-based reverse line blot assay. | McKechnie ML, Hillman R, Couldwell D, Kong F, Freedman E, Wang H, Gilbert GL. | J Clin Microbiol | 10.1128/jcm.00120-09 | 2009 | ||
| Pathogenicity | In vitro activity of BAY 12-8039, a novel 8-methoxyquinolone, compared to activities of six fluoroquinolones against Streptococcus pneumoniae, Haemophilus influenzae, and Moraxella catarrhalis. | Brueggemann AB, Kugler KC, Doern GV. | Antimicrob Agents Chemother | 10.1128/aac.41.7.1594 | 1997 | |
| Pathogenicity | Surveillance of susceptibility testing methodologies for Haemophilus influenzae in Canada, including evaluation of disk diffusion test. | Scriver SR, Hoban DJ, McGeer A, Moore TC, Walmsley SL, Low DE. | J Clin Microbiol | 10.1128/jcm.32.8.2013-2015.1994 | 1994 | |
| Cultivation | Broth microdilution testing of Haemophilus influenzae with haemophilus test medium versus lysed horse blood broth. Canadian Haemophilus Study Group. | Scriver SR, Low DE, Simor AE, Toye B, McGeer A, Jaeger R. | J Clin Microbiol | 10.1128/jcm.30.9.2284-2289.1992 | 1992 | |
| Pathogenicity | Interpretive criteria and quality control parameters for testing susceptibility of Haemophilus influenzae to enoxacin, ofloxacin, and temafloxacin. | Barry AL, Jorgensen JH, Hardy DJ, Allen SD, Baker CN, Fuchs PC, McLaughlin JC. | J Clin Microbiol | 10.1128/jcm.30.11.3013-3015.1992 | 1992 | |
| Development of PCR assays to detect ampicillin resistance genes in cerebrospinal fluid samples containing Haemophilus influenzae. | Tenover FC, Huang MB, Rasheed JK, Persing DH. | J Clin Microbiol | 10.1128/jcm.32.11.2729-2737.1994 | 1994 | ||
| Metabolism | Laminin receptor initiates bacterial contact with the blood brain barrier in experimental meningitis models. | Orihuela CJ, Mahdavi J, Thornton J, Mann B, Wooldridge KG, Abouseada N, Oldfield NJ, Self T, Ala'Aldeen DA, Tuomanen EI. | J Clin Invest | 10.1172/jci36759 | 2009 | |
| Pathogenicity | Comparative in vitro activity of cefixime against Haemophilus influenzae isolates, including ampicillin-resistant, non-beta-lactamase-producing isolates, from pediatric patients. | Mortensen JE, Himes SL. | Antimicrob Agents Chemother | 10.1128/aac.34.7.1456 | 1990 | |
| Cloning of a DNA fragment encoding a heme-repressible hemoglobin-binding outer membrane protein from Haemophilus influenzae. | Jin H, Ren Z, Pozsgay JM, Elkins C, Whitby PW, Morton DJ, Stull TL. | Infect Immun | 10.1128/iai.64.8.3134-3141.1996 | 1996 | ||
| Enzymology | Evaluation of API NH, a new 2-hour system for identification of Neisseria and Haemophilus species and Moraxella catarrhalis in a routine clinical laboratory. | Barbe G, Babolat M, Boeufgras JM, Monget D, Freney J. | J Clin Microbiol | 10.1128/jcm.32.1.187-189.1994 | 1994 | |
| Pathogenicity | Activities of two novel macrolides, GW 773546 and GW 708408, compared with those of telithromycin, erythromycin, azithromycin, and clarithromycin against Haemophilus influenzae. | Kosowska K, Credito K, Pankuch GA, Hoellman D, Lin G, Clark C, Dewasse B, McGhee P, Jacobs MR, Appelbaum PC. | Antimicrob Agents Chemother | 10.1128/aac.48.11.4113-4119.2004 | 2004 | |
| Comparison of three transport systems (Starplex StarSwab II, the new Copan Vi-Pak Amies Agar Gel collection and transport swabs, and BBL Port-A-Cul) for maintenance of anaerobic and fastidious aerobic organisms. | Hindiyeh M, Acevedo V, Carroll KC. | J Clin Microbiol | 10.1128/jcm.39.1.377-380.2001 | 2001 | ||
| Pathogenicity | In vitro antibiotic susceptibility of Neisseria gonorrhoeae in Jakarta, Indonesia. | Lesmana M, Lebron CI, Taslim D, Tjaniadi P, Subekti D, Wasfy MO, Campbell JR, Oyofo BA. | Antimicrob Agents Chemother | 10.1128/aac.45.1.359-362.2001 | 2001 | |
| Enzymology | Multicenter clinical laboratory evaluation of a beta-lactamase disk assay employing a novel chromogenic cephalosporin, S1. | Doern GV, Jones RN, Gerlach EH, Washington JA, Biedenbach DJ, Brueggemann A, Erwin ME, Knapp C, Raymond J. | J Clin Microbiol | 10.1128/jcm.33.6.1665-1667.1995 | 1995 | |
| Pathogenicity | In vitro activity of loracarbef (LY163892), a new oral carbacephem antimicrobial agent, against respiratory isolates of Haemophilus influenzae and Moraxella catarrhalis. | Doern GV, Vautour R, Parker D, Tubert T, Torres B. | Antimicrob Agents Chemother | 10.1128/aac.35.7.1504 | 1991 | |
| Pathogenicity | Antibiotic resistance among clinical isolates of Haemophilus influenzae in the United States in 1994 and 1995 and detection of beta-lactamase-positive strains resistant to amoxicillin-clavulanate: results of a national multicenter surveillance study. | Doern GV, Brueggemann AB, Pierce G, Holley HP, Rauch A. | Antimicrob Agents Chemother | 10.1128/aac.41.2.292 | 1997 | |
| Phylogeny | Multiplex LightCycler PCR assay for detection and differentiation of Bordetella pertussis and Bordetella parapertussis in nasopharyngeal specimens. | Sloan LM, Hopkins MK, Mitchell PS, Vetter EA, Rosenblatt JE, Harmsen WS, Cockerill FR, Patel R. | J Clin Microbiol | 10.1128/jcm.40.1.96-100.2002 | 2002 | |
| Enzymology | Development of PCR assays for species- and type-specific identification of Pasteurella multocida isolates. | Townsend KM, Frost AJ, Lee CW, Papadimitriou JM, Dawkins HJ. | J Clin Microbiol | 10.1128/jcm.36.4.1096-1100.1998 | 1998 | |
| Pathogenicity | A new pharmacological agent (AKB-4924) stabilizes hypoxia inducible factor-1 (HIF-1) and increases skin innate defenses against bacterial infection. | Okumura CY, Hollands A, Tran DN, Olson J, Dahesh S, von Kockritz-Blickwede M, Thienphrapa W, Corle C, Jeung SN, Kotsakis A, Shalwitz RA, Johnson RS, Nizet V. | J Mol Med (Berl) | 10.1007/s00109-012-0882-3 | 2012 | |
| Comparison of the Copan ESwab system with two Amies agar swab transport systems for maintenance of microorganism viability. | Van Horn KG, Audette CD, Sebeck D, Tucker KA. | J Clin Microbiol | 10.1128/jcm.02047-07 | 2008 | ||
| Pathogenicity | Quantitative antimicrobial susceptibility testing of Haemophilus influenzae and Streptococcus pneumoniae by using the E-test. | Jorgensen JH, Howell AW, Maher LA. | J Clin Microbiol | 10.1128/jcm.29.1.109-114.1991 | 1991 | |
| Pathogenicity | Use of the National Committee for Clinical Laboratory Standards guidelines for disk diffusion susceptibility testing in New York state laboratories. | Kiehlbauch JA, Hannett GE, Salfinger M, Archinal W, Monserrat C, Carlyn C. | J Clin Microbiol | 10.1128/jcm.38.9.3341-3348.2000 | 2000 | |
| Enzymology | Diagnostic usefulness of ribosomal protein l7/l12 for pneumococcal pneumonia in a mouse model. | Sawa T, Kimura S, Honda NH, Fujita K, Yoshizawa S, Harada Y, Sugiyama Y, Matsuyama K, Sohka T, Saji T, Yamaguchi K, Tateda K. | J Clin Microbiol | 10.1128/jcm.01871-12 | 2013 | |
| Pathogenicity | Antimicrobial resistance among respiratory isolates of Haemophilus influenzae, Moraxella catarrhalis, and Streptococcus pneumoniae in the United States. | Jorgensen JH, Doern GV, Maher LA, Howell AW, Redding JS. | Antimicrob Agents Chemother | 10.1128/aac.34.11.2075 | 1990 | |
| Haemophilus influenzae type b isolates show antigenic variation in a major outer membrane protein. | Erwin AL, Kenny GE. | Infect Immun | 10.1128/iai.46.2.570-577.1984 | 1984 | ||
| Identification, cloning, and expression of the Escherichia coli pyrazinamidase and nicotinamidase gene, pncA. | Frothingham R, Meeker-O'Connell WA, Talbot EA, George JW, Kreuzer KN. | Antimicrob Agents Chemother | 10.1128/aac.40.6.1426 | 1996 | ||
| Metabolism | 5' nuclease PCR assay to detect Yersinia pestis. | Higgins JA, Ezzell J, Hinnebusch BJ, Shipley M, Henchal EA, Ibrahim MS. | J Clin Microbiol | 10.1128/jcm.36.8.2284-2288.1998 | 1998 | |
| Phylogeny | Sequetyping: serotyping Streptococcus pneumoniae by a single PCR sequencing strategy. | Leung MH, Bryson K, Freystatter K, Pichon B, Edwards G, Charalambous BM, Gillespie SH. | J Clin Microbiol | 10.1128/jcm.06384-11 | 2012 | |
| Metabolism | Growth of Haemophilus influenzae in simulated blood cultures supplemented with hemin and NAD. | Artman M, Domenech E, Weiner M. | J Clin Microbiol | 10.1128/jcm.18.2.376-379.1983 | 1983 | |
| Genetics | Validation and Implementation of Clinical Laboratory Improvements Act-Compliant Whole-Genome Sequencing in the Public Health Microbiology Laboratory. | Kozyreva VK, Truong CL, Greninger AL, Crandall J, Mukhopadhyay R, Chaturvedi V. | J Clin Microbiol | 10.1128/jcm.00361-17 | 2017 | |
| Enzymology | One-step heminested PCR for amplification of Neisseria meningitidis DNA in cerebrospinal fluid. | Atobe JH, Hirata MH, Hoshino-Shimizu S, Schmal MR, Mamizuka EM. | J Clin Lab Anal | 10.1002/1098-2825(2000)14:4<193::aid-jcla9>3.0.co;2-2 | 2000 | |
| Pathogenicity | Multicenter evaluation of the use of Haemophilus test medium for broth microdilution antimicrobial susceptibility testing of Streptococcus pneumoniae and development of quality control limits. | Jorgensen JH, Doern GV, Ferraro MJ, Knapp CC, Swenson JM, Washington JA. | J Clin Microbiol | 10.1128/jcm.30.4.961-966.1992 | 1992 | |
| Pathogenicity | Susceptibility testing of macrolide antibiotics against Haemophilus influenzae and correlation of in vitro results with in vivo efficacy in a mouse septicemia model. | Fernandes PB, Hardy D, Bailer R, McDonald E, Pintar J, Ramer N, Swanson R, Gade E. | Antimicrob Agents Chemother | 10.1128/aac.31.8.1243 | 1987 | |
| Enzymology | Evaluation of three influenza A and B real-time reverse transcription-PCR assays and a new 2009 H1N1 assay for detection of influenza viruses. | Selvaraju SB, Selvarangan R. | J Clin Microbiol | 10.1128/jcm.02464-09 | 2010 | |
| Phylogeny | Francisella tularensis molecular typing using differential insertion sequence amplification. | Larson MA, Fey PD, Bartling AM, Iwen PC, Dempsey MP, Francesconi SC, Hinrichs SH. | J Clin Microbiol | 10.1128/jcm.00033-11 | 2011 | |
| Enzymology | Comparison of a new quantitative ompA-based real-Time PCR TaqMan assay for detection of Chlamydia pneumoniae DNA in respiratory specimens with four conventional PCR assays. | Apfalter P, Barousch W, Nehr M, Makristathis A, Willinger B, Rotter M, Hirschl AM. | J Clin Microbiol | 10.1128/jcm.41.2.592-600.2003 | 2003 | |
| Enzymology | Development of a rapid automated influenza A, influenza B, and respiratory syncytial virus A/B multiplex real-time RT-PCR assay and its use during the 2009 H1N1 swine-origin influenza virus epidemic in Milwaukee, Wisconsin. | Beck ET, Jurgens LA, Kehl SC, Bose ME, Patitucci T, LaGue E, Darga P, Wilkinson K, Witt LM, Fan J, He J, Kumar S, Henrickson KJ. | J Mol Diagn | 10.2353/jmoldx.2010.090095 | 2010 | |
| Pathogenicity | In vitro activity and in vivo efficacy of a new series of 9-deoxo-12-deoxy-9,12-epoxyerythromycin A derivatives. | Hardy DJ, Swanson RN, Shipkowitz NL, Freiberg LA, Lartey PA, Clement JJ. | Antimicrob Agents Chemother | 10.1128/aac.35.5.922 | 1991 | |
| Pathogenicity | Improved medium for antimicrobial susceptibility testing of Haemophilus influenzae. | Jorgensen JH, Redding JS, Maher LA, Howell AW. | J Clin Microbiol | 10.1128/jcm.25.11.2105-2113.1987 | 1987 | |
| Enzymology | Direct detection of Legionella species from bronchoalveolar lavage and open lung biopsy specimens: comparison of LightCycler PCR, in situ hybridization, direct fluorescence antigen detection, and culture. | Hayden RT, Uhl JR, Qian X, Hopkins MK, Aubry MC, Limper AH, Lloyd RV, Cockerill FR. | J Clin Microbiol | 10.1128/jcm.39.7.2618-2626.2001 | 2001 | |
| Detection of 11 common viral and bacterial pathogens causing community-acquired pneumonia or sepsis in asymptomatic patients by using a multiplex reverse transcription-PCR assay with manual (enzyme hybridization) or automated (electronic microarray) detection. | Kumar S, Wang L, Fan J, Kraft A, Bose ME, Tiwari S, Van Dyke M, Haigis R, Luo T, Ghosh M, Tang H, Haghnia M, Mather EL, Weisburg WG, Henrickson KJ. | J Clin Microbiol | 10.1128/jcm.00625-08 | 2008 | ||
| Haemophilus ducreyi adheres to but does not invade cultured human foreskin cells. | Alfa MJ, Degagne P, Hollyer T. | Infect Immun | 10.1128/iai.61.5.1735-1742.1993 | 1993 | ||
| Strategy for sensitive and specific detection of Yersinia pestis in skeletons of the black death pandemic. | Seifert L, Harbeck M, Thomas A, Hoke N, Zoller L, Wiechmann I, Grupe G, Scholz HC, Riehm JM. | PLoS One | 10.1371/journal.pone.0075742 | 2013 | ||
| Molecular characterization of vanB elements in naturally occurring gut anaerobes. | Ballard SA, Pertile KK, Lim M, Johnson PD, Grayson ML. | Antimicrob Agents Chemother | 10.1128/aac.49.5.1688-1694.2005 | 2005 | ||
| Enzymology | A sensitive, specific, and cost-effective multiplex reverse transcriptase-PCR assay for the detection of seven common respiratory viruses in respiratory samples. | Syrmis MW, Whiley DM, Thomas M, Mackay IM, Williamson J, Siebert DJ, Nissen MD, Sloots TP. | J Mol Diagn | 10.1016/s1525-1578(10)60500-4 | 2004 | |
| Metabolism | Bacteroides fragilis strains express multiple capsular polysaccharides. | Pantosti A, Tzianabos AO, Reinap BG, Onderdonk AB, Kasper DL. | J Clin Microbiol | 10.1128/jcm.31.7.1850-1855.1993 | 1993 | |
| Pathogenicity | In vitro antibiotic susceptibilities of Neisseria gonorrhoeae isolates in the Philippines. | Clendennen TE, Hames CS, Kees ES, Price FC, Rueppel WJ, Andrada AB, Espinosa GE, Kabrerra G, Wignall FS. | Antimicrob Agents Chemother | 10.1128/aac.36.2.277 | 1992 | |
| Pathogenicity | Antibiotic susceptibility survey of Neisseria gonorrhoeae in Thailand. | Clendennen TE, Echeverria P, Saengeur S, Kees ES, Boslego JW, Wignall FS. | Antimicrob Agents Chemother | 10.1128/aac.36.8.1682 | 1992 | |
| The gene encoding a new mitogenic factor in a Streptococcus pyogenes strain is distributed only in group A streptococci. | Yutsudo T, Okumura K, Iwasaki M, Hara A, Kamitani S, Minamide W, Igarashi H, Hinuma Y. | Infect Immun | 10.1128/iai.62.9.4000-4004.1994 | 1994 | ||
| Pathogenicity | Antimicrobial resistance with Streptococcus pneumoniae in the United States, 1997 98. | Doern GV, Brueggemann AB, Huynh H, Wingert E. | Emerg Infect Dis | 10.3201/eid0506.990603 | 1999 | |
| Mode of action of the dual-action cephalosporin Ro 23-9424. | Georgopapadakou NH, Bertasso A, Chan KK, Chapman JS, Cleeland R, Cummings LM, Dix BA, Keith DD. | Antimicrob Agents Chemother | 10.1128/aac.33.7.1067 | 1989 | ||
| Pathogenicity | Antimicrobial resistance of Streptococcus pneumoniae recovered from outpatients in the United States during the winter months of 1994 to 1995: results of a 30-center national surveillance study. | Doern GV, Brueggemann A, Holley HP, Rauch AM. | Antimicrob Agents Chemother | 10.1128/aac.40.5.1208 | 1996 | |
| Use of tissue culture and animal models to identify virulence-associated traits of Haemophilus ducreyi. | Alfa MJ, Stevens MK, DeGagne P, Klesney-Tait J, Radolf JD, Hansen EJ. | Infect Immun | 10.1128/iai.63.5.1754-1761.1995 | 1995 | ||
| Enzymology | Novel, rapid optical immunoassay technique for detection of group A streptococci from pharyngeal specimens: comparison with standard culture methods. | Harbeck RJ, Teague J, Crossen GR, Maul DM, Childers PL. | J Clin Microbiol | 10.1128/jcm.31.4.839-844.1993 | 1993 | |
| Pathogenicity | Beta-lactamase production and susceptibilities to amoxicillin, amoxicillin-clavulanate, ticarcillin, ticarcillin-clavulanate, cefoxitin, imipenem, and metronidazole of 320 non-Bacteroides fragilis Bacteroides isolates and 129 fusobacteria from 28 U.S. centers. | Appelbaum PC, Spangler SK, Jacobs MR. | Antimicrob Agents Chemother | 10.1128/aac.34.8.1546 | 1990 | |
| Defining the mode of action of tetramic acid antibacterials derived from Pseudomonas aeruginosa quorum sensing signals. | Lowery CA, Park J, Gloeckner C, Meijler MM, Mueller RS, Boshoff HI, Ulrich RL, Barry CE, Bartlett DH, Kravchenko VV, Kaufmann GF, Janda KD. | J Am Chem Soc | 10.1021/ja9056079 | 2009 | ||
| Antimicrobial Potential and Phytochemical Profile of Wild and Cultivated Populations of Thyme (Thymus sp.) Growing in Western Romania. | Beicu R, Alexa E, Obistioiu D, Cocan I, Imbrea F, Pop G, Circioban D, Moisa C, Lupitu A, Copolovici L, Copolovici DM, Imbrea IM | Plants (Basel) | 10.3390/plants10091833 | 2021 | ||
| Pathogenicity | Ceftaroline activity on certain respiratory tract and wound infection agents at the minimum inhibitory concentration level. | Yanik K, Guluzade E, Bilgin K, Karadag A, Eroglu C, Birinci A, Gunaydin M | J Infect Dev Ctries | 10.3855/jidc.6300 | 2015 | |
| Metabolism | Morphological and biochemical variations of Haemophilus influenzae type b induced by pH and temperature changes. | Oliva B, Taraborelli T, Paludi D, Faraone A, Dainelli B | New Microbiol | 2001 | ||
| Pathogenicity | Use of dot-immunobinding and immunofluorescence assays to investigate clinically suspected cases of chancroid. | Schalla WO, Sanders LL, Schmid GP, Tam MR, Morse SA | J Infect Dis | 10.1093/infdis/153.5.879 | 1986 |
| #4561 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11969 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #41778 | ; Curators of the CIP; |
| #51728 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 33775 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #68377 | Automatically annotated from API NH . |
| #68382 | Automatically annotated from API zym . |
| #120110 | Collection of Institut Pasteur ; Curators of the CIP; CIP 103708 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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