Name: Paenibacillus thailandensis S3-4A
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 11637

Type strain:

Species: Paenibacillus thailandensis

Strain Designation: S3-4A

Culture col. no.: DSM 22866, KCTC 13043, PCU 275, TISTR 1827

Strain history: <- S Tanasupawat, Chulalongkorn Univ., Thailand

NCBI tax ID(s): 393250 (species)

SI-ID 399749

DSM 22866

Section

Paenibacillus thailandensis S3-4A is a facultative anaerobe, spore-forming, mesophilic bacterium that was isolated from soil sample.

Gram-positive
motile
rod-shaped
spore-forming
facultative anaerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Paenibacillaceae*
	Genus	*Paenibacillus*
	Species	**Paenibacillus thailandensis**
	Full Scientific Name (LPSN)	Paenibacillus thailandensis Khianngam et al. 2009

Information on morphological and physiological properties Morphology

[Ref.: #28883]	Gram stain	positive
[Ref.: #67771]	Gram stain	positive

[Ref.: #28883]	Cell length	4-12 µm

[Ref.: #28883]	Cell width	0.8-1.2 µm

[Ref.: #28883]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #28883]	Motility	yes
[Ref.: #67771]	Motility	yes

[Ref.: #67771]	Flagellum arrangement	peritrichous

[Ref.: #28883]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16588]

Culture medium

XYLAN MEDIUM (DSMZ Medium 1235)

[Ref.: #16588]

Culture medium growth

[Ref.: #16588]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16588]

Culture medium composition

expand / minimize

[Ref.: #16588]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220)

[Ref.: #16588]

Culture medium growth

[Ref.: #16588]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16588]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #16588]	growth	30 °C
[Ref.: #28883]	growth	20-55 °C
[Ref.: #28883]	optimum	37 °C
[Ref.: #67771]	growth	37 °C

[Ref.: #16588]	Temperature range	mesophilic
[Ref.: #28883]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #28883]			optimum	7.5
[Ref.: #28883]			growth	7-9

Information on physiology and metabolism Physiology and metabolism

[Ref.: #28883]	Oxygen tolerance	facultative anaerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #67771]	Type of spore	endospore
[Ref.: #67771]	Ability of spore formation	yes
[Ref.: #28883]	Ability of spore formation	yes

[Ref.: #67771]

Observation

quinones: MK-7

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #28883]	arabinose ChEBI	+	carbon source
[Ref.: #28883]	cellobiose ChEBI	+	carbon source
[Ref.: #28883]	esculin ChEBI	+	hydrolysis
[Ref.: #28883]	fructose ChEBI	+	carbon source
[Ref.: #28883]	fucose ChEBI	+	carbon source
[Ref.: #28883]	galactose ChEBI	+	carbon source
[Ref.: #28883]	gluconate ChEBI	+	carbon source
[Ref.: #28883]	glucose ChEBI	+	carbon source
[Ref.: #28883]	glycerol ChEBI	+	carbon source
[Ref.: #28883]	glycogen ChEBI	+	carbon source
[Ref.: #28883]	L-arabitol ChEBI	+	carbon source
[Ref.: #28883]	lactose ChEBI	+	carbon source
[Ref.: #28883]	maltose ChEBI	+	carbon source
[Ref.: #28883]	mannitol ChEBI	+	carbon source
[Ref.: #28883]	mannose ChEBI	+	carbon source
[Ref.: #28883]	melibiose ChEBI	+	carbon source
[Ref.: #28883]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #28883]	raffinose ChEBI	+	carbon source
[Ref.: #28883]	rhamnose ChEBI	+	carbon source
[Ref.: #28883]	ribitol ChEBI	+	carbon source
[Ref.: #28883]	ribose ChEBI	+	carbon source
[Ref.: #28883]	salicin ChEBI	+	carbon source
[Ref.: #28883]	sorbitol ChEBI	+	carbon source
[Ref.: #28883]	trehalose ChEBI	+	carbon source
[Ref.: #28883]	xylitol ChEBI	+	carbon source
[Ref.: #28883]	xylose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #28883]		catalase	+	1.11.1.6
[Ref.: #28883]		cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16588]	Sample type/isolated from	soil sample
[Ref.: #16588]	Geographic location (country and/or sea, region)	Nan province, Muang district
[Ref.: #16588]	Country	Thailand
[Ref.: #16588]	Country ISO 3 Code	THA
[Ref.: #16588]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From soil
[Ref.: #67771]	Country	Thailand
[Ref.: #67771]	Country ISO 3 Code	THA
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB265205 (>99% sequence identity) for Paenibacillus thailandensis subclade from Microbeatlas

Aquatic Samples	4
Soil Samples	6
Animal Samples	6
Plant Samples	6
Total Samples	22

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #16588]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16588]	Paenibacillus thailandensis gene for 16S rRNA, partial sequence	AB265205	1485	ENA	393250 tax ID

[Ref.: #16588]

GC-content

52.7 mol%

Availability in culture collections External links

[Ref.: #16588]

Culture collection no.

DSM 22866, KCTC 13043, PCU 275, TISTR 1827

[Ref.: #80862]

SI-ID 399749

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Paenibacillus protaetiae sp. nov., isolated from gut of larva of Protaetia brevitarsis seulensis.	Heo J, Kim SJ, Kim JS, Hong SB, Kwon SW	Int J Syst Evol Microbiol	10.1099/ijsem.0.003860	2020	*
Phylogeny	Paenibacillus arachidis sp. nov., isolated from groundnut seeds.	Sadaf K, Tushar L, Nirosha P, Podile AR, Sasikala C, Ramana CV	Int J Syst Evol Microbiol	10.1099/ijsem.0.001124	2016	*
Phylogeny	Paenibacillus populi sp. nov., a novel bacterium isolated from the rhizosphere of Populus alba.	Han TY, Tong XM, Wang YW, Wang HM, Chen XR, Kong DL, Guo X, Ruan ZY	Antonie Van Leeuwenhoek	10.1007/s10482-015-0521-4	2015	*
Phylogeny	Paenibacillus chungangensis sp. nov., isolated from a tidal-flat sediment.	Park MH, Traiwan J, Jung MY, Nam YS, Jeong JH, Kim W	Int J Syst Evol Microbiol	10.1099/ijs.0.021832-0	2010	*
Phylogeny	Paenibacillus thailandensis sp. nov. and Paenibacillus nanensis sp. nov., xylanase-producing bacteria isolated from soil.	Khianngam S, Akaracharanya A, Tanasupawat S, Lee KC, Lee JS	Int J Syst Evol Microbiol	10.1099/ijs.0.000406-0	2009	*

References

#16588

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22866

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#28883

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25323 (see below)

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#80862

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID399749.1 )

#25323

IJSEM 564 2009 ( DOI 10.1099/ijs.0.000406-0 , PubMed 19244442 )

* These data were automatically processed and therefore are not curated

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