Paenibacillus massiliensis subsp. massiliensis (KCTC 3991, DSM 16942, CCUG 48215)

Name: Paenibacillus massiliensis subsp. massiliensis (KCTC 3991, DSM 16942, CCUG 48215)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 11579

Type strain

Strain Designation 2301065

Culture col. no. KCTC 3991 DSM 16942 CCUG 48215 CIP 107939 2301065

NCBI tax ID(s) 225917 2884454

Special Collections DSMZ CCUG KCTC CIP Literature strains

History DSMZ <- CIP CIP <- 2003, P. Berger, CH de laTimone, Marseille, France: strain 2301065 CIP <- 2003, P. Berger, Timone Hosp., Marseille, France: strain 2301065

Links

Paenibacillus massiliensis subsp. massiliensis 2301065 is a facultative anaerobe, spore-forming, Gram-positive bacterium that was isolated from blood culture.

spore-forming Gram-positive motile rod-shaped facultative anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 129636

CCUG 48215,CIP 107939,DSM 16942,KCTC 3991

@ref 20215

Last LPSN update 2026-05-29 08:27:35

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Paenibacillaceae

Genus Paenibacillus

Species Paenibacillus massiliensis subsp. massiliensis

Full scientific name Paenibacillus massiliensis subsp. massiliensis (Roux and Raoult 2004) Tonial et al. 2020

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
30113	positive	3 µm	0.5 µm	rod-shaped
120854	positive			rod-shaped

Colony morphology

120854

Hemolysis ability0

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
6659	CASO AGAR (MERCK 105458) (DSMZ Medium 220)	Medium recipe at MediaDive	Name: CASO AGAR (Merck 105458) (DSMZ Medium 220; with strain-specific modifications) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l MnSO4 Distilled water
34308	MEDIUM 6 - Columbia agar with 10 % horse blood		Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)
120854	CIP Medium 6	Medium recipe at CIP
120854	CIP Medium 45	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
6659	positive	growth	30
30113	positive	growth	30-50
30113	positive	optimum	33.5
34308	positive	growth	37
58043	positive	growth	30
120854	positive	growth	22-37
120854	negative	growth	10

Culture pH

@ref	Ability	Type	PH
120854	positive	growth	6

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
30113	facultative anaerobe
58043	aerobe
120854	facultative anaerobe
125439	facultative anaerobe	94.318

Spore formation

@ref	Spore formation	Confidence
30113
125439		95.09
120854

Halophily

@ref	Salt	Growth	Tested relation	Concentration
30113	NaCl	positive	growth	0.5 %
120854	NaCl	positive	growth	0-4 %
120854	NaCl		growth	6 %
120854	NaCl		growth	8 %
120854	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	+	builds acid from	from API 50CH acid
30113	22599 ChEBI	arabinose	+	carbon source
68371	18305 ChEBI	arbutin	+	builds acid from	from API 50CH acid
68368	29016 ChEBI	arginine	-	hydrolysis	from API 20E
30113	17057 ChEBI	cellobiose	+	carbon source
120854	17057 ChEBI	cellobiose	-	degradation
68371	17057 ChEBI	cellobiose	+	builds acid from	from API 50CH acid
120854	16947 ChEBI	citrate	-	carbon source
68368	16947 ChEBI	citrate	-	assimilation	from API 20E
120854	17108 ChEBI	D-arabinose	-	degradation
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
120854	15824 ChEBI	D-fructose	-	degradation
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
120854	17634 ChEBI	D-glucose	-	degradation
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68368	17634 ChEBI	D-glucose	-	fermentation	from API 20E
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	+	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
120854	65327 ChEBI	D-xylose	-	degradation
68371	65327 ChEBI	D-xylose	+	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
30113	4853 ChEBI	esculin	+	hydrolysis
120854	4853 ChEBI	esculin	+	hydrolysis
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
30113	28757 ChEBI	fructose	+	carbon source
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
30113	28260 ChEBI	galactose	+	carbon source
68368	5291 ChEBI	gelatin	-	hydrolysis	from API 20E
68371	28066 ChEBI	gentiobiose	+	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
30113	17234 ChEBI	glucose	+	carbon source
30113	17754 ChEBI	glycerol	+	carbon source
68371	17754 ChEBI	glycerol	+	builds acid from	from API 50CH acid
30113	28087 ChEBI	glycogen	+	carbon source
68371	28087 ChEBI	glycogen	+	builds acid from	from API 50CH acid
120854	606565 ChEBI	hippurate	+	hydrolysis
68371	15443 ChEBI	inulin	+	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	+	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
30113	17716 ChEBI	lactose	+	carbon source
120854	17716 ChEBI	lactose	-	degradation
68371	17716 ChEBI	lactose	+	builds acid from	from API 50CH acid
68368	25094 ChEBI	lysine	-	degradation	from API 20E
30113	17306 ChEBI	maltose	+	carbon source
120854	17306 ChEBI	maltose	-	degradation
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
30113	29864 ChEBI	mannitol	+	carbon source
30113	37684 ChEBI	mannose	+	carbon source
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
30113	28053 ChEBI	melibiose	+	carbon source
68371	28053 ChEBI	melibiose	+	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	+	builds acid from	from API 50CH acid
30113	17632 ChEBI	nitrate	+	reduction
120854	17632 ChEBI	nitrate	+	reduction
120854	17632 ChEBI	nitrate	+	respiration
68368	17632 ChEBI	nitrate	-	reduction	from API 20E
120854	16301 ChEBI	nitrite	-	reduction
68368	18257 ChEBI	ornithine	-	degradation	from API 20E
68371	0 ChEBI	Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
30113	16634 ChEBI	raffinose	+	carbon source
68371	16634 ChEBI	raffinose	+	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
30113	33942 ChEBI	ribose	+	carbon source
30113	17814 ChEBI	salicin	+	carbon source
120854	17814 ChEBI	salicin	-	degradation
68371	17814 ChEBI	salicin	+	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	+	builds acid from	from API 50CH acid
30113	17992 ChEBI	sucrose	+	carbon source
120854	17992 ChEBI	sucrose	-	degradation
68371	17992 ChEBI	sucrose	+	builds acid from	from API 50CH acid
30113	27082 ChEBI	trehalose	+	carbon source
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68368	27897 ChEBI	tryptophan	-	energy source	from API 20E
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68368	16199 ChEBI	urea	-	hydrolysis	from API 20E
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	17997 ChEBI	dinitrogen	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
120854	35581 ChEBI	indole
68368	35581 ChEBI	indole	from API 20E
68368	16301 ChEBI	nitrite	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test	Indole test
120854	15688 ChEBI	acetoin	-
68368	15688 ChEBI	acetoin	-			from API 20E
120854	17234 ChEBI	glucose		-
68368	35581 ChEBI	indole			-	from API 20E

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
120854	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
120854	amylase	+
68368	arginine dihydrolase	-	3.5.3.6	from API 20E
68382	beta-galactosidase	+	3.2.1.23	from API zym
120854	beta-galactosidase	+	3.2.1.23
68368	beta-galactosidase	-	3.2.1.23	from API 20E
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
120854	caseinase	-	3.4.21.50
120854	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
120854	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
120854	gamma-glutamyltransferase	-	2.3.2.2
120854	gelatinase	-
68368	gelatinase	-		from API 20E
120854	lecithinase	-
68382	leucine arylamidase	-	3.4.11.1	from API zym
120854	lipase	+
68382	lipase (C 14)	-		from API zym
120854	lysine decarboxylase	-	4.1.1.18
68368	lysine decarboxylase	-	4.1.1.18	from API 20E
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
120854	ornithine decarboxylase	-	4.1.1.17
68368	ornithine decarboxylase	-	4.1.1.17	from API 20E
120854	oxidase	-
120854	protease	-
68382	trypsin	-	3.4.21.4	from API zym
68368	tryptophan deaminase	-	4.1.99.1	from API 20E
120854	tween esterase	-
120854	urease	-	3.5.1.5
68368	urease	-	3.5.1.5	from API 20E
68382	valine arylamidase	-		from API zym

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
120854	-	-	-	-	-	-	-	-	-	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
120854	-	+	+	+	-	-	-	-	-	-	-	+	+	+	-	-	+	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
120854	not determinedn.d.	+	-	-	+	+	+	-	-	+/-	+	+	+	+	-	+/-	-	+/-	+	-	+	-	+/-	+	+	+	+	+	+	+	+	+	+	+	-	+	+	+	-	+	-	-	-	-	-	-	-	-	-	+/-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
120854	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Infection	#Patient	#Blood culture
#Host Body Product	#Fluids	#Blood

Isolation

@ref	Sample type	Host species	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
6659	blood culture			Marseille,Timone hospital	France	FRA	Europe
58043	Human blood,13-yr-old boy,acute leukaemia	Homo sapiens	2002	Marseille	France	FRA	Europe
120854	Human, Blood	Homo sapiens		Marseille	France	FRA	Europe	2002

Taxonmaps

69479

Global distribution of 16S sequence AY323608 (>99% sequence identity) for Paenibacillus from Microbeatlas

Aquatic Samples	126
Soil Samples	953
Animal Samples	229
Plant Samples	1370
Total Samples	2678

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Biosafety level	Biosafety level comment
6659	yes, in single cases	1	Risk group (German classification) According to TRBA 466
120854		1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM37750v1 assembly for Paenibacillus massiliensis 2301065 = DSM 16942	scaffold	GCA_000377505	1122921.3	2517572189	1122921	71.61

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
6659	Paenibacillus sp. 'Smarlab BioMol-2301065' 16S ribosomal RNA gene, partial sequence	AY323608	1502		225917

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM37750v1 assembly for Paenibacillus massiliensis 2301065 = DSM 16942
NCBI: GCA_000377505

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	gram_stain	BacteriaNetⓘ	variable	59.46	no
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	94.32	no
125439	motility	BacteriaNetⓘ	yes	88.17	no
125439	spore_formation	BacteriaNetⓘ	yes	95.09	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Paenibacillus massiliensis 2301065 = DSM 16942 DSM 16942
NCBI: GCA_000377505.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	70.89	yes
125438	anaerobic	anaerobicⓘ	no	88.02	no
125438	aerobic	aerobicⓘ	no	53.27	no
125438	spore-forming	spore-formingⓘ	yes	88.30	no
125438	thermophilic	thermophileⓘ	no	94.07	yes
125438	flagellated	motile2+ⓘ	yes	87.59	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Genome mining: Prediction of lipopeptides and polyketides from Bacillus and related Firmicutes.	Aleti G, Sessitsch A, Brader G.	Comput Struct Biotechnol J	10.1016/j.csbj.2015.03.003	2015
Genetics	Genome sequence and description of Paenibacillus ihuae strain GD6 sp. nov., isolated from the stool of a 62-year-old Frenchman.	Al-Bayssari C, Dubourg G, Cimmino T, Okdah L, Mathlouthi N, Nguyen TT, Andrieu C, Rathored J, Fournier PE, Raoult D, Rolain JM.	New Microbes New Infect	10.1016/j.nmni.2018.02.010	2018
Genetics	Non-contiguous finished genome sequence and description of Paenibacillus gorillae sp. nov.	Keita MB, Padhmananabhan R, Caputo A, Robert C, Delaporte E, Raoult D, Fournier PE, Bittar F.	Stand Genomic Sci	10.4056/sigs.5189179	2014
Phylogeny	Genome-based reclassification of Paenibacillus panacisoli DSM 21345(T) as Paenibacillus massiliensis subsp. panacisoli subsp. nov. and description of Paenibacillus massiliensis subsp. massiliensis subsp. nov.	Tonial F, Guella F, Passaglia LMP, Sant'Anna FH	Int J Syst Evol Microbiol	10.1099/ijsem.0.004328	2020
Phylogeny	Paenibacillus provencensis sp. nov., isolated from human cerebrospinal fluid, and Paenibacillus urinalis sp. nov., isolated from human urine.	Roux V, Fenner L, Raoult D	Int J Syst Evol Microbiol	10.1099/ijs.0.65228-0	2008
Phylogeny	Paenibacillus massiliensis sp. nov., Paenibacillus sanguinis sp. nov. and Paenibacillus timonensis sp. nov., isolated from blood cultures.	Roux V, Raoult D	Int J Syst Evol Microbiol	10.1099/ijs.0.02954-0	2004

References

#6659	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16942
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#26468	IJSEM 1049 2004 ( DOI 10.1099/ijs.0.02954-0 , PubMed 15280268 )
#30113	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26468
#34308	; Curators of the CIP;
#58043	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 48215
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68368	Automatically annotated from API 20E .
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#120854	Collection of Institut Pasteur ; Curators of the CIP; CIP 107939
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Paenibacillus massiliensis subsp. massiliensis (KCTC 3991, DSM 16942, CCUG 48215)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API 20E

API zym

API 50CHac

API biotype100

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000377505

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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