Name: Paenibacillus chibensis DSM 11731
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 11545

Type strain:

Species: Paenibacillus chibensis

Culture col. no.: DSM 11731, IFO 15958, JCM 9905, NBRC 15958, NRRL B-142, HSCC 442, PCI 221, ATCC 9966, ATCC BAA 725, CCM 1084, CECT 375, CIP 105254, IAM 1112, IFO 3329, KCTC 3758, LMG 14457, NBRC 3329, NCIMB 8144

Strain history: HSCC 442 <-- NRRL B-142 <-- FDA strain PCI 221.

NCBI tax ID(s): 59846 (species)

Other strains from Paenibacillus chibensis

P. chibensis DSM 329, ATCC 9966, CCM 1084, NCIB ...
P. chibensis DSM 11732, NRRL NRS-359, HSCC 497
P. chibensis DSM 13408, NRRL B-717
P. chibensis DSM 13412, ATCC 9966, HSCC 474, ...

Section

Paenibacillus chibensis DSM 11731 is a mesophilic bacterium that was isolated from soil.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	25-08-2022 (DD-MM-YYYY)
	Domain	Bacteria
	Phylum	Bacillota
	Class	Bacilli
	Order	Caryophanales
	Family	Paenibacillaceae
	Genus	Paenibacillus
	Species	Paenibacillus chibensis
	Full Scientific Name (PNU)	Paenibacillus chibensis Shida et al. 1997

Information on culture and growth conditions Culture and growth conditions

[Ref.: #4462]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #4462]

Culture medium growth

[Ref.: #4462]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4462]

Culture medium composition

expand / minimize

[Ref.: #35797]

Culture medium

MEDIUM 3 - Columbia agar

[Ref.: #35797]

Culture medium growth

[Ref.: #35797]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #4462]	growth	30 °C
[Ref.: #35797]	growth	30 °C
[Ref.: #67770]	growth	30 °C

[Ref.: #4462]	Temperature range	mesophilic
[Ref.: #35797]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-7

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #4462]	Sample type/isolated from	soil
[Ref.: #4462]	Country	USA
[Ref.: #4462]	Country ISO 3 Code	USA
[Ref.: #4462]	Continent	North America

[Ref.: #67770]	Sample type/isolated from	Soil

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #4462]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Paenibacillus chibensis gene for 16S rRNA, partial sequence	AB073194	1505	ENA	59846 tax ID	*
[Ref.: #20218]	Paenibacillus chibensis gene for 16S rRNA, partial sequence, strain: NBRC 15958	AB681006	1480	ENA	59846 tax ID	*
[Ref.: #20218]	B.amylolyticus 16S ribosomal RNA	X60606	1435	ENA	1451 tax ID	*
[Ref.: #20218]	Paenibacillus chibensis DNA for 16S rRNA	D85395	1436	ENA	59846 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Paenibacillus chibensis NBRC 15958	GCA_004001045	contig	GenBank	59846 tax ID	*
[Ref.: #66792]	Paenibacillus chibensis strain NBRC 15958	59846.3	wgs	PATRIC	59846 tax ID	*
[Ref.: #66792]	Paenibacillus chibensis NBRC 15958	2925295060	draft	JGI IMG/M	59846 tax ID	*
[Ref.: #67770]	Paenibacillus chibensis strain NBRC 15958, whole genome shotgun sequencing project	BIMK00000000		GenBank	59846 tax ID

[Ref.: #67770]

GC-content

52.8 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #4462]

Culture collection no.

DSM 11731, IFO 15958, JCM 9905, NBRC 15958, NRRL B-142, HSCC 442, PCI 221, ATCC 9966, ATCC BAA 725, CCM 1084, CECT 375, CIP 105254, IAM 1112, IFO 3329, KCTC 3758, LMG 14457, NBRC 3329, NCIMB 8144

[Ref.: #20218]

Associated Passport(s) in StrainInfo

162816, 41335, 41337, 335978, 41342

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Paenibacillus telluris sp. nov., a novel phosphate-solubilizing bacterium isolated from soil.	Lee JC, Kim CJ, Yoon KH	J Microbiol	10.1007/s12275-011-0471-0	2011	*
Phylogeny	Paenibacillus shirakamiensis sp. nov., isolated from the trunk surface of a Japanese oak (Quercus crispula).	Tonouchi A, Tazawa D, Fujita T	Int J Syst Evol Microbiol	10.1099/ijs.0.055772-0	2014	*
Phylogeny	Paenibacillus zeae sp. nov., isolated from maize (Zea mays L.) seeds.	Liu Y, Zhai L, Wang R, Zhao R, Zhang X, Chen C, Cao Y, Cao Y, Xu T, Ge Y, Zhao J, Cheng C	Int J Syst Evol Microbiol	10.1099/ijsem.0.000608	2015	*
Phylogeny	Paenibacillus solani sp. nov., isolated from potato rhizosphere soil.	Liu B, Liu GH, Sengonca C, Schumann P, Lan JL, Chen DJ, Cui WD, Lin NQ	Int J Syst Evol Microbiol	10.1099/ijsem.0.001378	2016	*
Phylogeny	Description of Paenibacillus dokdonensis sp. nov., a new bacterium isolated from soil.	Paek J, Bai L, Shin Y, Kim H, Kook JK, Chang YH	Int J Syst Evol Microbiol	10.1099/ijsem.0.004707	2021	*
Metabolism	Antifungal Activity of Biocontrol Agents In Vitro and Potential Application to Reduce Mycotoxins (Aflatoxin B1 and Ochratoxin A).	Illueca F, Vila-Donat P, Calpe J, Luz C, Meca G, Quiles JM	Toxins (Basel)	10.3390/toxins13110752	2021	*

References

#4462

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11731

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#35797 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
* These data were automatically processed and therefore are not curated

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