Brevibacillus aydinogluensis (DSM 24395, LMG 26289, PDF25)

Name: Brevibacillus aydinogluensis (DSM 24395, LMG 26289, PDF25)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 11441

Type strain

Strain Designation PDF25

Culture col. no. DSM 24395 LMG 26289 PDF25

NCBI tax ID(s) 927786

Special Collections DSMZ Literature strains

History DSMZ <- A. O. Belduz, Karadeniz Techn. Univ., Trabzon, Turkey; PDF25 <- K. Inan

Links

Brevibacillus aydinogluensis PDF25 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from hot spring.

spore-forming Gram-positive motile rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 406398

DSM 24395

@ref 20215

Last LPSN update 2026-05-29 08:27:34

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Paenibacillaceae

Genus Brevibacillus

Species Brevibacillus aydinogluensis

Full scientific name Brevibacillus aydinogluensis Inan et al. 2012

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
30258	positive	2-4.3 µm	0.3-0.6 µm	rod-shaped

Pigmentation

30258

Productionyes

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
17657	CASO AGAR (MERCK 105458) (DSMZ Medium 220)		Medium recipe at MediaDive	Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
17657	positive	growth	50
30258	positive	growth	35-65
30258	positive	optimum	55

Culture pH

@ref	Ability	Type	PH	PH range
30258	positive	optimum	7
30258	positive	growth	06-10	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
30258	aerobe
125439	facultative anaerobe	91.22

Spore formation

30258

Spore formationyes

Halophily

@ref	Salt	Growth	Tested relation	Concentration
30258	NaCl	positive	growth	2 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30258	22599 ChEBI	arabinose	+	carbon source
30258	33942 ChEBI	ribose	+	carbon source
30258	18222 ChEBI	xylose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
30258	cytochrome oxidase	+	1.9.3.1
30258	gelatinase	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Thermal spring
#Condition	#Thermophilic (>45°C)	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
17657	hot spring	Izmir	Turkey	TUR	Asia

Taxonmaps

69479

Global distribution of 16S sequence HQ419073 (>99% sequence identity) for Brevibacillus thermoruber from Microbeatlas

Aquatic Samples	1512
Soil Samples	5730
Animal Samples	1992
Plant Samples	1394
Total Samples	10628

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
17657	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM3195436v1 assembly for Brevibacillus aydinogluensis PDF25	contig	GCA_031954365	927786.4	2928297429	927786	60

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
17657	Brevibacillus aydinogluensis strain PDF25 16S ribosomal RNA gene, partial sequence	HQ419073	1425		927786

GC content

@ref	GC-content (mol%)	Method
17657	56.09	thermal denaturation, midpoint method (Tm)
30258	56.09

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM3195436v1 assembly for Brevibacillus aydinogluensis PDF25
NCBI: GCA_031954365

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	91.22	no
125439	gram_stain	BacteriaNetⓘ	variable	75.62	no
125439	motility	BacteriaNetⓘ	yes	81.64	no
125439	spore_formation	BacteriaNetⓘ	yes	82.65	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Brevibacillus aydinogluensis sp. nov., a moderately thermophilic bacterium isolated from Karakoc hot spring.	Inan K, Canakci S, Belduz AO, Sahin F	Int J Syst Evol Microbiol	10.1099/ijs.0.031914-0	2011

References

#17657	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 24395
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#26599	IJSEM 849 2012 ( DOI 10.1099/ijs.0.031914-0 , PubMed 21622837 )
#30258	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26599
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Brevibacillus aydinogluensis (DSM 24395, LMG 26289, PDF25)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_031954365

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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