Herbaspirillum autotrophicum SA 32 | Type strain | DSM 732, ATCC 29984, CCUG 12808, LMG 4326, CIP 107295, IAM 14942, NBRC 15327

Strain identifier

BacDive ID: 11351

Type strain:

Species: Herbaspirillum autotrophicum

Strain Designation: SA 32

Culture col. no.: DSM 732, ATCC 29984, CCUG 12808, LMG 4326, CIP 107295, IAM 14942, NBRC 15327

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #377]	Domain	Bacteria
[Ref.: #377]	Phylum	Proteobacteria
[Ref.: #377]	Class	Betaproteobacteria
[Ref.: #377]	Order	Burkholderiales
[Ref.: #377]	Family	Oxalobacteraceae
[Ref.: #377]	Genus	Herbaspirillum
[Ref.: #377]	Species	Herbaspirillum autotrophicum
[Ref.: #377]	Full Scientific Name	Herbaspirillum autotrophicum (Aragno and Schlegel 1978) Ding and Yokota 2004
[Ref.: #377]	Strain Designation	SA 32
[Ref.: #377]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
	Last PNU update	19-11-2019 (DD-MM-YYYY)
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Proteobacteria
[Ref.: #20215]	Class	Betaproteobacteria		Int. J. Syst. Evol. Microbiol. 56:1
[Ref.: #20215]	Family	Oxalobacteraceae		Int. J. Syst. Evol. Microbiol. 56:1
[Ref.: #20215]	Genus	Herbaspirillum	gen. nov. (VP)	Int. J. Syst. Bacteriol. 36:86*
[Ref.: #20215]	Species	Herbaspirillum autotrophicum	comb. nov. (VP)	Int. J. Syst. Evol. Microbiol. 54:2223*
[Ref.: #20215]	Full Scientific Name	Herbaspirillum autotrophicum (Aragno and Schlegel 1978) Ding and Yokota 2004

[Ref.: #20215]

Synonym

Aquaspirillum autotrophicum

Information on morphological and physiological propertiesMorphology and physiology

[Ref.: #45831]

Oxygen tolerance

aerobe

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #33759]

Culture medium

MEDIUM 14 - Williams and Rittenberg medium for Aquaspirillum genus

[Ref.: #33759]

Culture medium growth

[Ref.: #33759]

Culture medium composition

expand / minimize

[Ref.: #377]

Culture medium

MINERAL MEDIUM FOR CHEMOLITHOTROPHIC GROWTH (H-3) (DSMZ Medium 81), 28°C

[Ref.: #377]

Culture medium growth

[Ref.: #377]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #377]

Culture medium

SPIRILLUM MEDIUM (DSMZ Medium 37), 28°C

[Ref.: #377]

Culture medium growth

[Ref.: #377]

Culture medium link

medium recipe provided by DSMZ

		Temperature
[Ref.: #377]	growth	28 ̊C
[Ref.: #33759]	growth	25 ̊C
[Ref.: #45831]	growth	25-30 ̊C

[Ref.: #377]	Temperature range	mesophilic
[Ref.: #33759]	Temperature range	mesophilic
[Ref.: #45831]	Temperature range	mesophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #377]

Sample type/isolated from

eutrophic lake water

[Ref.: #377]

Country

Switzerland

[Ref.: #377]

Continent

Europe

[Ref.: #45831]

Sample type/isolated from

Eutrophic lake water

[Ref.: #45831]

Country

Switzerland

[Ref.: #45831]

Continent

Europe

Isolation sources categories

#Environmental

#Aquatic

#Lake (large)

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #377]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

[Ref.: #377]

GC-content

61.7 mol%

Sequence information:

	Sequence database	Sequence accession description	Sequence accession number	Sequence type	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #377]	16S rRNA gene, Marker Gene (DDBJ Direct submission)	Aquaspirillum autotrophicum gene for 16S rRNA, partial sequence	AB074524		1489	180195
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Herbaspirillum autotrophicum gene for 16S rRNA, partial sequence, strain: NBRC 15327	AB680836	16S	1458	180195	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Herbaspirillum autotrophicum strain SA32 23S ribosomal RNA gene, partial sequence	DQ150562		2440	180195	*

Availability in culture collectionsStrain availability

[Ref.: #377]

Culture collection no.

DSM 732, ATCC 29984, CCUG 12808, LMG 4326, CIP 107295, IAM 14942, NBRC 15327

[Ref.: #377]

Strain history

<- M. Aragno, SA 32

[Ref.: #20218]

Associated Passport(s) in StrainInfo

3667, 3665

References

#377	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 732

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#33759 ; Curators of the CIP;
#45831 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 12808
* These References are textmined

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Herbaspirillum autotrophicum in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF