Name: Oceanospirillum beijerinckii DSM 6288
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 11286

Type strain:

Species: Oceanospirillum beijerinckii

Culture col. no.: DSM 6288, ATCC 33337, IFO 3612, NBRC 3612, NCIMB 2228, CIP 103385, IFO 13612, LMG 5307

Strain history: CIP <- 1990, IFO <- 1966, Y. Terasaki: strain UF1, Oceanospirillum pelagicum

NCBI tax ID(s): 64982 (subspecies)

SI-ID 3651

LMG 5307, ATCC 33337, IFO 13612, NCMB 2228, CIP 103385, DSM 6288, IFO 3612, NCIMB 2228, NBRC 13612, NBRC 3612

Other strains from Oceanospirillum beijerinckii

O. beijerinckii DSM 7166, ATCC 12754, NCMB 52, ... (type strain)

Section

Oceanospirillum beijerinckii DSM 6288 is a mesophilic bacterium that was isolated from marine shellfish.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Oceanospirillales*
	Family	*Oceanospirillaceae*
	Genus	*Oceanospirillum*
	Species	**Oceanospirillum beijerinckii**
	Full Scientific Name (LPSN)	Oceanospirillum beijerinckii (Williams and Rittenberg 1957) Hylemon et al. 1973 (Approved Lists 1980)

	Synonym	"Spirillum* pelagicum"*
	Synonym	"Spirillum* beijerinckii"*
	Synonym	Oceanospirillum pelagicum
	Synonym	Oceanospirillum beijerinckii subsp. pelagicum

Information on culture and growth conditions Culture and growth conditions

[Ref.: #2574]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #2574]

Culture medium growth

[Ref.: #2574]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2574]

Culture medium composition

expand / minimize

[Ref.: #34259]

Culture medium

Marine agar (MA)

[Ref.: #34259]

Culture medium growth

[Ref.: #34259]

Culture medium composition

expand / minimize

[Ref.: #116778]

Culture medium

CIP Medium 13

[Ref.: #116778]

Culture medium growth

[Ref.: #116778]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #2574]			growth	30 °C
[Ref.: #34259]			growth	25 °C

[Ref.: #2574]	Temperature range	mesophilic
[Ref.: #34259]	Temperature range	mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #2574]	Sample type/isolated from	marine shellfish

[Ref.: #116778]	Sample type/isolated from	Other, Putrid infusion, marine shellfish
[Ref.: #116778]	Geographic location (country and/or sea, region)	Hiroshima
[Ref.: #116778]	Country	Japan
[Ref.: #116778]	Country ISO 3 Code	JPN
[Ref.: #116778]	Continent	Asia
[Ref.: #116778]	Isolation date	1966
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Host	#Invertebrates (Other)	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB006761 (>99% sequence identity) for Oceanospirillum beijerinckii subclade from Microbeatlas

Aquatic Samples	1926
Soil Samples	59
Animal Samples	312
Plant Samples	8
Total Samples	2305

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #2574]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #116778]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #2574]	Oceanospirillum beijerinckii subsp. pelagicum gene for 16S rRNA, partial sequence, strain: IFO 13612	AB006761	1461	ENA	64982 tax ID

Availability in culture collections External links

[Ref.: #2574]

Culture collection no.

DSM 6288, ATCC 33337, IFO 3612, NBRC 3612, NCIMB 2228, CIP 103385, IFO 13612, LMG 5307

[Ref.: #80519]

SI-ID 3651

References

#2574

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6288

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#34259 ; Curators of the CIP;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#80519

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID3651.1 )

#116778 Collection of Institut Pasteur ; Curators of the CIP; CIP 103385
* These data were automatically processed and therefore are not curated

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