Name: Nocardiopsis umidischolae 66/93
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 11203

Type strain:

Species: Nocardiopsis umidischolae

Strain Designation: 66/93, ID 4036

Culture col. no.: DSM 44362, JCM 11758, NRRL B-24122, NBRC 100349, VTT E-032351

Strain history: DSM 44362 <-- M. A. Andersson 66/93.

NCBI tax ID(s): 163605 (species)

SI-ID 50591

DSM 44362, NRRL B-24122, JCM 11758, NBRC 100349, VTT E-032351

Special Collections

DSMZ
JCM

Other strains from Nocardiopsis umidischolae

Section

Nocardiopsis umidischolae 66/93 is a bacterium that produces antibiotic compounds and was isolated from indoor dust from a water-damaged school.

antibiotic compound production
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Nocardiopsidaceae*
	Genus	*Nocardiopsis*
	Species	**Nocardiopsis umidischolae**
	Full Scientific Name (LPSN)	Nocardiopsis umidischolae Peltola et al. 2002

Information on culture and growth conditions Culture and growth conditions

[Ref.: #11705]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #11705]

Culture medium growth

[Ref.: #11705]

Culture medium link

Medium recipe at MediaDive

[Ref.: #11705]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #11705]			growth	28 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #11705]

Name of produced compound

valinomycin

[Ref.: #67770]

Observation

quinones: MK-10(H₆)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #11705]	Sample type/isolated from	indoor dust from a water-damaged school
[Ref.: #11705]	Geographic location (country and/or sea, region)	Espoo
[Ref.: #11705]	Country	Finland
[Ref.: #11705]	Country ISO 3 Code	FIN
[Ref.: #11705]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Indoor dust of a water-damaged school
* marker position based on {}

Isolation sources categories

#Engineered	#Built environment	-
#Engineered	#Built environment	#Indoor
#Engineered	#Waste	#Dust (Ash)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB368715 (>99% sequence identity) for Nocardiopsis from Microbeatlas

Aquatic Samples	3
Soil Samples	9
Animal Samples	7
Plant Samples	3
Total Samples	22

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #11705]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Nocardiopsis umidischolae gene for 16S rRNA, partial sequence	AB368715	1457	GenBank ENA	163605 tax ID
[Ref.: #11705]	Nocardiopsis umidischolae 16S ribosomal RNA gene, partial sequence	AY036001	1453	GenBank ENA	163605 tax ID

Availability in culture collections External links

[Ref.: #11705]

Culture collection no.

DSM 44362, JCM 11758, NRRL B-24122, NBRC 100349, VTT E-032351

[Ref.: #80449]

SI-ID 50591

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Isolation of toxigenic Nocardiopsis strains from indoor environments and description of two new Nocardiopsis Species, N. exhalans sp. nov. and N. umidischolae sp. nov.	Peltola JS, Andersson MA, Kampfer P, Auling G, Kroppenstedt RM, Busse HJ, Salkinoja-Salonen MS, Rainey FA	Appl Environ Microbiol	10.1128/AEM.67.9.4293-4304.2001	2001	*

References

#11705

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44362

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#80449

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID50591.1 )

* These data were automatically processed and therefore are not curated

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