Name: Nocardiopsis tropica DSM 44381
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 11202

Type strain:

Species: Nocardiopsis tropica

Culture col. no.: DSM 44381, CIP 106426, VKM Ac-1457, JCM 10877, CGMCC 4.2092, ATCC 15732, CBS 674.72, IFO 13373, RIA 1334, ISP 5381, IPV 398

Strain history: CIP <- 2000, DSM <- E.B. Shirling, ISP, Streptomyces viridis <- E. Baldacci: strain IPV 398

NCBI tax ID(s): 109330 (species)

Special Collections

Section

Nocardiopsis tropica DSM 44381 is an obligate aerobe, mesophilic, Gram-negative bacterium that builds an aerial mycelium and was isolated from Soil in the rhizosphere of Casuarina sp..

Gram-negative
rod-shaped
mesophilic
obligate aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Nocardiopsidaceae*
	Genus	*Nocardiopsis*
	Species	**Nocardiopsis tropica**
	Full Scientific Name (LPSN)	Nocardiopsis tropica Evtushenko et al. 2000

Information on morphological and physiological properties Morphology

[Ref.: #123589]	Gram stain	negative

[Ref.: #123589]	Cell shape	rod-shaped

[Ref.: #19859]	Colony color	Mahagony brown
[Ref.: #19859]	Incubation period	10-14 days
[Ref.: #19859]	Cultivation medium used	ISP 2

[Ref.: #19859]	Colony color	Orange brown
[Ref.: #19859]	Incubation period	10-14 days
[Ref.: #19859]	Cultivation medium used	ISP 3

[Ref.: #19859]	Colony color	Beige
[Ref.: #19859]	Incubation period	10-14 days
[Ref.: #19859]	Cultivation medium used	ISP 4

[Ref.: #19859]	Colony color	Beige
[Ref.: #19859]	Incubation period	10-14 days
[Ref.: #19859]	Cultivation medium used	ISP 5

[Ref.: #19859]	Colony color	Black brown
[Ref.: #19859]	Incubation period	10-14 days
[Ref.: #19859]	Cultivation medium used	ISP 6

[Ref.: #19859]	Colony color	Beige
[Ref.: #19859]	Incubation period	10-14 days
[Ref.: #19859]	Cultivation medium used	ISP 7

[Ref.: #19859]	Multicellular complex forming ability	yes
[Ref.: #19859]	Multicellular complex name	Aerial Mycelium
[Ref.: #19859]	Multicellular complex color	Ivory
[Ref.: #19859]	Medium Name (multicellularity)	ISP 2

[Ref.: #19859]	Multicellular complex forming ability	yes
[Ref.: #19859]	Multicellular complex name	Aerial Mycelium
[Ref.: #19859]	Multicellular complex color	Ivory
[Ref.: #19859]	Medium Name (multicellularity)	ISP 3

[Ref.: #19859]	Multicellular complex forming ability	yes
[Ref.: #19859]	Multicellular complex name	Aerial Mycelium
[Ref.: #19859]	Multicellular complex color	Ivory
[Ref.: #19859]	Medium Name (multicellularity)	ISP 4

[Ref.: #19859]	Multicellular complex forming ability	no
[Ref.: #19859]	Medium Name (multicellularity)	ISP 5

[Ref.: #19859]	Multicellular complex forming ability	yes
[Ref.: #19859]	Multicellular complex name	Aerial Mycelium
[Ref.: #19859]	Multicellular complex color	Beige
[Ref.: #19859]	Medium Name (multicellularity)	ISP 6

[Ref.: #19859]	Multicellular complex forming ability	yes
[Ref.: #19859]	Multicellular complex name	Aerial Mycelium
[Ref.: #19859]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #19859]

Culture medium

ISP 2

[Ref.: #19859]

Culture medium growth

[Ref.: #19859]

Culture medium composition

expand / minimize

[Ref.: #19859]

Culture medium

ISP 3

[Ref.: #19859]

Culture medium growth

[Ref.: #19859]

Culture medium composition

expand / minimize

[Ref.: #19859]

Culture medium

ISP 4

[Ref.: #19859]

Culture medium growth

[Ref.: #19859]

Culture medium composition

expand / minimize

[Ref.: #19859]

Culture medium

ISP 5

[Ref.: #19859]

Culture medium growth

[Ref.: #19859]

Culture medium composition

expand / minimize

[Ref.: #19859]

Culture medium

ISP 6

[Ref.: #19859]

Culture medium growth

[Ref.: #19859]

Culture medium composition

expand / minimize

[Ref.: #19859]

Culture medium

ISP 7

[Ref.: #19859]

Culture medium growth

[Ref.: #19859]

Culture medium composition

expand / minimize

[Ref.: #37244]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #37244]

Culture medium growth

[Ref.: #37244]

Culture medium composition

expand / minimize

[Ref.: #123589]

Culture medium

CIP Medium 72

[Ref.: #123589]

Culture medium growth

[Ref.: #123589]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #19859]		optimum	28 °C
[Ref.: #37244]		growth	30 °C
[Ref.: #67770]		growth	28 °C
[Ref.: #123589]		growth	25-37 °C
[Ref.: #123589]	no	growth	10 °C
[Ref.: #123589]	no	growth	41 °C
[Ref.: #123589]	no	growth	45 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #123589]

Oxygen tolerance

obligate aerobe

	Salt	Tested relation		Salt conc.
[Ref.: #123589]	NaCl		growth	0-4	%
[Ref.: #123589]	NaCl	no	growth	6	%
[Ref.: #123589]	NaCl	no	growth	8	%
[Ref.: #123589]	NaCl	no	growth	10	%

[Ref.: #67770]

Observation

quinones: MK-10(H₆), MK-10(H₈)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68371]	amygdalin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #19859]	arabinose ChEBI	-
[Ref.: #68371]	arbutin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68368]	arginine ChEBI	+	hydrolysis	* from API 20E
[Ref.: #19859]	cellulose ChEBI	+
[Ref.: #123589]	citrate ChEBI	-	carbon source
[Ref.: #68368]	citrate ChEBI	+	assimilation	* from API 20E
[Ref.: #68371]	D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fructose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-galactose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-glucose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-ribose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-tagatose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #123589]	esculin ChEBI	-	hydrolysis
[Ref.: #68371]	esculin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #19859]	fructose ChEBI	+
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68368]	gelatin ChEBI	-	hydrolysis	* from API 20E
[Ref.: #68371]	gentiobiose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	gluconate ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #19859]	glucose ChEBI	+
[Ref.: #68371]	glycerol ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycogen ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #123589]	hippurate ChEBI	+	hydrolysis
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	lactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68368]	lysine ChEBI	+	degradation	* from API 20E
[Ref.: #68371]	maltose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #19859]	mannitol ChEBI	+
[Ref.: #68371]	melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melibiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #19859]	myo-inositol ChEBI	-
[Ref.: #68371]	myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	N-acetylglucosamine ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #123589]	nitrate ChEBI	+	reduction
[Ref.: #123589]	nitrate ChEBI	-	respiration
[Ref.: #123589]	nitrite ChEBI	-	reduction
[Ref.: #68368]	ornithine ChEBI	+	degradation	* from API 20E
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	Potassium 5-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #19859]	raffinose ChEBI	+
[Ref.: #68371]	raffinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #19859]	rhamnose ChEBI	+
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	salicin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	starch ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #19859]	sucrose ChEBI	-
[Ref.: #68371]	sucrose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68371]	turanose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68368]	urea ChEBI	+	hydrolysis	* from API 20E
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #19859]	xylose ChEBI	-
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #123589]	indole ChEBI	no
[Ref.: #68368]	acetoin ChEBI	no	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	yes	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test
[Ref.: #123589]	acetoin ChEBI	-
[Ref.: #123589]	glucose ChEBI		-
[Ref.: #68368]	acetoin ChEBI	-			* from API 20E
[Ref.: #68368]	indole ChEBI			-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #123589]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #123589]	amylase	-
[Ref.: #68368]	arginine dihydrolase	+	3.5.3.6	* from API 20E
[Ref.: #123589]	beta-galactosidase	-	3.2.1.23
[Ref.: #68368]	beta-galactosidase	+	3.2.1.23	* from API 20E
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #123589]	caseinase	-	3.4.21.50
[Ref.: #123589]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	+	3.4.11.3	* from API zym
[Ref.: #123589]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #123589]	gelatinase	-
[Ref.: #68368]	gelatinase	-		* from API 20E
[Ref.: #123589]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #123589]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #123589]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68368]	lysine decarboxylase	+	4.1.1.18	* from API 20E
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #123589]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #68368]	ornithine decarboxylase	+	4.1.1.17	* from API 20E
[Ref.: #123589]	oxidase	+
[Ref.: #123589]	protease	-
[Ref.: #123589]	tryptophan deaminase	-
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #123589]	tween esterase	-
[Ref.: #123589]	urease	-	3.5.1.5
[Ref.: #68368]	urease	+	3.5.1.5	* from API 20E
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #19859]	537	+	+	+	+	+	+	+	-	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #123589]	10547	not determinedn.d.	+	-	-	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	+	+	-	+	-	+/-	-	-	-	-	+/-	-	-	-	-	+	-	+	-	-	-	-	-	-	-	+	-	-

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #123589]	1681	not determinedn.d.	+	-	+	+	+	-	-	-	-	+	+	+	-	-	-	+	+	-	+	+	-	+	-	-	-	-	+	-	-	-	-	+	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	+	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	+	-	-	+	-	+	+	+	+	-	-	-	+	-	+	-	+	+	+	+	-	+	+	-	+	+	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #19859]	671	not determinedn.d.	+	-	-	-	+	+	+	+	+	+	+	-	+	-	+	+	+	-	-
[Ref.: #123589]	9490	-	+	+	+	-	+	+	+	-	+	-	+	-	-	-	+	+	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Soil in the rhizosphere of Casuarina sp.
[Ref.: #67770]	Host species	Casuarina sp.
[Ref.: #67770]	Country	Seychelles
[Ref.: #67770]	Country ISO 3 Code	SYC
[Ref.: #67770]	Continent	Africa
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence LC214995 (>99% sequence identity) for Nocardiopsis from Microbeatlas

Aquatic Samples	3
Soil Samples	9
Animal Samples	7
Plant Samples	3
Total Samples	22

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #11502]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #19859]	Biosafety level	1	Risk group (German classification)
[Ref.: #123589]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Nocardiopsis tropica gene for 16S ribosomal RNA, partial sequence, culture_collection: JCM:10877	LC214995	1470	GenBank ENA	109330 tax ID
[Ref.: #20218]	Nocardiopsis tropica 16S ribosomal RNA gene, partial sequence	AF105971	1452	GenBank ENA	109330 tax ID	*

Availability in culture collections External links

[Ref.: #11502]

Culture collection no.

DSM 44381, CIP 106426, VKM Ac-1457, JCM 10877, CGMCC 4.2092, ATCC 15732, CBS 674.72, IFO 13373, RIA 1334, ISP 5381, IPV 398

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Nocardiopsis tropica sp. nov., Nocardiopsis trehalosi sp. nov., nom. rev. and Nocardiopsis dassonvillei subsp. albirubida subsp. nov., comb. nov.	Evtushenko LI, Taran VV, Akimov VN, Kroppenstedt RM, Tiedje JM, Stackebrandt E	Int J Syst Evol Microbiol	10.1099/00207713-50-1-73	2000	*

References

#11502

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44381

#19859

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#37244 ; Curators of the CIP;
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#68371

Automatically annotated from API 50CH acid .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#123589 Collection of Institut Pasteur ; Curators of the CIP; CIP 106426
* These data were automatically processed and therefore are not curated

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