Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 is a mesophilic, Gram-positive, rod-shaped prokaryote that was isolated from Environment, Soil.
Gram-positive rod-shaped mesophilic genome sequence 16S sequence
SI-ID 265447
| @ref 20215 |
Last LPSN update
2025-12-16 09:49:31 |
| Domain Bacillati |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Streptosporangiales |
| Family Nocardiopsidaceae |
| Genus Nocardiopsis |
| Species Nocardiopsis dassonvillei subsp. dassonvillei |
| Full scientific name Nocardiopsis dassonvillei subsp. dassonvillei (Brocq-Rousseau 1904) Miyashita et al. 1984 (Approved Lists 1980) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 10774 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | Medium recipe at MediaDive  | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water | ||
| 40678 | MEDIUM 57 - for Streptomyces, Nocardioides, Lentzea albidocapillata and Streptoverticillium reticulum | Distilled water make up to (1000.000 ml);Agar (15.000 g);Glucose (4.000g);Yeast extract (4.000 g);Malt extract (10.000 g);Calcium carbonate (2.000 g) | |||
| 10774 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | Medium recipe at MediaDive | Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water | ||
| 118857 | CIP Medium 57 | Medium recipe at CIP |
| 20216 | CompoundGlucose isomerase |
| 67770 | Observationquinones: MK-10(H4), MK-10(H6), MK-10(H2), MK-10(H2), MK-10, MK-10(II,III-H4) |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | - | builds acid from | from API 50CH acid |
| 68368 | 29016 ChEBI | arginine | - | hydrolysis | from API 20E |
| 118857 | 17057 ChEBI | cellobiose | - | degradation | |
| 68371 | 17057 ChEBI | cellobiose | - | builds acid from | from API 50CH acid |
| 43413 | 62968 ChEBI | cellulose | + | hydrolysis | |
| 118857 | 16947 ChEBI | citrate | - | carbon source | |
| 68368 | 16947 ChEBI | citrate | - | assimilation | from API 20E |
| 118857 | 17108 ChEBI | D-arabinose | - | degradation | |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 118857 | 15824 ChEBI | D-fructose | - | degradation | |
| 68371 | 15824 ChEBI | D-fructose | - | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | - | builds acid from | from API 50CH acid |
| 68379 | 17634 ChEBI | D-glucose | - | fermentation | from API Coryne |
| 118857 | 17634 ChEBI | D-glucose | - | degradation | |
| 68371 | 17634 ChEBI | D-glucose | - | builds acid from | from API 50CH acid |
| 68368 | 17634 ChEBI | D-glucose | - | fermentation | from API 20E |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68379 | 16899 ChEBI | D-mannitol | - | fermentation | from API Coryne |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 118857 | 16024 ChEBI | D-mannose | - | degradation | |
| 68371 | 16024 ChEBI | D-mannose | - | builds acid from | from API 50CH acid |
| 68379 | 16988 ChEBI | D-ribose | - | fermentation | from API Coryne |
| 68371 | 16988 ChEBI | D-ribose | - | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 118857 | 65327 ChEBI | D-xylose | - | degradation | |
| 68379 | 65327 ChEBI | D-xylose | - | fermentation | from API Coryne |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 68379 | 4853 ChEBI | esculin | + | hydrolysis | from API Coryne |
| 118857 | 4853 ChEBI | esculin | + | hydrolysis | |
| 68371 | 4853 ChEBI | esculin | - | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68379 | 5291 ChEBI | gelatin | - | hydrolysis | from API Coryne |
| 68368 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20E |
| 68371 | 28066 ChEBI | gentiobiose | - | builds acid from | from API 50CH acid |
| 68371 | 24265 ChEBI | gluconate | - | builds acid from | from API 50CH acid |
| 68371 | 17754 ChEBI | glycerol | - | builds acid from | from API 50CH acid |
| 68379 | 28087 ChEBI | glycogen | - | fermentation | from API Coryne |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 118857 | 606565 ChEBI | hippurate | + | hydrolysis | |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68368 | 62345 ChEBI | L-rhamnose | - | fermentation | from API 20E |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 118857 | 17716 ChEBI | lactose | - | degradation | |
| 68379 | 17716 ChEBI | lactose | - | fermentation | from API Coryne |
| 68371 | 17716 ChEBI | lactose | - | builds acid from | from API 50CH acid |
| 68368 | 25094 ChEBI | lysine | - | degradation | from API 20E |
| 68379 | 17306 ChEBI | maltose | - | fermentation | from API Coryne |
| 118857 | 17306 ChEBI | maltose | - | degradation | |
| 68371 | 17306 ChEBI | maltose | - | builds acid from | from API 50CH acid |
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68368 | 28053 ChEBI | melibiose | - | fermentation | from API 20E |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68368 | 17268 ChEBI | myo-inositol | - | fermentation | from API 20E |
| 68371 | 59640 ChEBI | N-acetylglucosamine | - | builds acid from | from API 50CH acid |
| 68379 | 17632 ChEBI | nitrate | - | reduction | from API Coryne |
| 118857 | 17632 ChEBI | nitrate | - | reduction | |
| 68368 | 17632 ChEBI | nitrate | - | reduction | from API 20E |
| 118857 | 16301 ChEBI | nitrite | - | reduction | |
| 68368 | 18257 ChEBI | ornithine | - | degradation | from API 20E |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 118857 | 17814 ChEBI | salicin | - | degradation | |
| 68371 | 17814 ChEBI | salicin | - | builds acid from | from API 50CH acid |
| 68368 | 30911 ChEBI | sorbitol | - | fermentation | from API 20E |
| 68371 | 28017 ChEBI | starch | - | builds acid from | from API 50CH acid |
| 68379 | 17992 ChEBI | sucrose | - | fermentation | from API Coryne |
| 118857 | 17992 ChEBI | sucrose | - | degradation | |
| 68371 | 17992 ChEBI | sucrose | - | builds acid from | from API 50CH acid |
| 68368 | 17992 ChEBI | sucrose | - | fermentation | from API 20E |
| 68371 | 27082 ChEBI | trehalose | - | builds acid from | from API 50CH acid |
| 68368 | 27897 ChEBI | tryptophan | - | energy source | from API 20E |
| 68371 | 32528 ChEBI | turanose | - | builds acid from | from API 50CH acid |
| 68379 | 16199 ChEBI | urea | - | hydrolysis | from API Coryne |
| 68368 | 16199 ChEBI | urea | - | hydrolysis | from API 20E |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Metabolite | Is antibiotic | Is sensitive | Is resistant | |
|---|---|---|---|---|---|
| 118857 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | - | 3.1.3.2 | from API zym |
| 118857 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68379 | alkaline phosphatase | + | 3.1.3.1 | from API Coryne |
| 68382 | alpha-chymotrypsin | + | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68379 | alpha-glucosidase | + | 3.2.1.20 | from API Coryne |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68368 | arginine dihydrolase | - | 3.5.3.6 | from API 20E |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 118857 | beta-galactosidase | - | 3.2.1.23 | |
| 68379 | beta-galactosidase | - | 3.2.1.23 | from API Coryne |
| 68368 | beta-galactosidase | - | 3.2.1.23 | from API 20E |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68379 | beta-glucosidase | + | 3.2.1.21 | from API Coryne |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68379 | beta-glucuronidase | - | 3.2.1.31 | from API Coryne |
| 118857 | catalase | + | 1.11.1.6 | |
| 68379 | catalase | + | 1.11.1.6 | from API Coryne |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | - | from API zym | |
| 118857 | gamma-glutamyltransferase | + | 2.3.2.2 | |
| 118857 | gelatinase | - | ||
| 68379 | gelatinase | - | from API Coryne | |
| 68368 | gelatinase | - | from API 20E | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 118857 | lysine decarboxylase | - | 4.1.1.18 | |
| 68368 | lysine decarboxylase | - | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68379 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | from API Coryne |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 118857 | ornithine decarboxylase | - | 4.1.1.17 | |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 | from API 20E |
| 118857 | oxidase | - | ||
| 118857 | phenylalanine ammonia-lyase | - | 4.3.1.24 | |
| 68379 | pyrazinamidase | - | 3.5.1.B15 | from API Coryne |
| 68379 | pyrrolidonyl arylamidase | + | 3.4.19.3 | from API Coryne |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 118857 | tryptophan deaminase | - | ||
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 118857 | urease | - | 3.5.1.5 | |
| 68379 | urease | - | 3.5.1.5 | from API Coryne |
| 68368 | urease | - | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | - | from API zym |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 |   |
|
| 66794 | Entner Doudoroff pathway | 100 | 10 of 10 | |
|
| 66794 | cardiolipin biosynthesis | 100 | 7 of 7 | |
|
| 66794 | threonine metabolism | 100 | 10 of 10 | |
|
| 66794 | aspartate and asparagine metabolism | 100 | 9 of 9 | |
|
| 66794 | acetate fermentation | 100 | 4 of 4 | |
|
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | |
|
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | |
|
| 66794 | methylglyoxal degradation | 100 | 5 of 5 | |
|
| 66794 | valine metabolism | 100 | 9 of 9 | |
|
| 66794 | enterobactin biosynthesis | 100 | 3 of 3 | |
|
| 66794 | starch degradation | 100 | 10 of 10 | |
|
| 66794 | biotin biosynthesis | 100 | 4 of 4 | |
|
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | |
|
| 66794 | kanosamine biosynthesis II | 100 | 2 of 2 | |
|
| 66794 | phenylacetate degradation (aerobic) | 100 | 5 of 5 | |
|
| 66794 | aerobactin biosynthesis | 100 | 1 of 1 | |
|
| 66794 | taurine degradation | 100 | 1 of 1 | |
|
| 66794 | ceramide biosynthesis | 100 | 1 of 1 | |
|
| 66794 | suberin monomers biosynthesis | 100 | 2 of 2 | |
|
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | |
|
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | |
|
| 66794 | sulfopterin metabolism | 100 | 4 of 4 | |
|
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | |
|
| 66794 | formaldehyde oxidation | 100 | 3 of 3 | |
|
| 66794 | glycine betaine biosynthesis | 100 | 5 of 5 | |
|
| 66794 | vitamin K metabolism | 100 | 5 of 5 | |
|
| 66794 | glycolate and glyoxylate degradation | 100 | 6 of 6 | |
|
| 66794 | molybdenum cofactor biosynthesis | 100 | 9 of 9 | |
|
| 66794 | folate polyglutamylation | 100 | 1 of 1 | |
|
| 66794 | adipate degradation | 100 | 2 of 2 | |
|
| 66794 | cellulose degradation | 100 | 5 of 5 | |
|
| 66794 | phenylalanine metabolism | 92.31 | 12 of 13 | |
|
| 66794 | pentose phosphate pathway | 90.91 | 10 of 11 | |
|
| 66794 | CO2 fixation in Crenarchaeota | 88.89 | 8 of 9 | |
|
| 66794 | serine metabolism | 88.89 | 8 of 9 | |
|
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | |
|
| 66794 | C4 and CAM-carbon fixation | 87.5 | 7 of 8 | |
|
| 66794 | gluconeogenesis | 87.5 | 7 of 8 | |
|
| 66794 | ketogluconate metabolism | 87.5 | 7 of 8 | |
|
| 66794 | isoleucine metabolism | 87.5 | 7 of 8 | |
|
| 66794 | peptidoglycan biosynthesis | 86.67 | 13 of 15 | |
|
| 66794 | pyrimidine metabolism | 86.67 | 39 of 45 | |
|
| 66794 | purine metabolism | 86.17 | 81 of 94 | |
|
| 66794 | photosynthesis | 85.71 | 12 of 14 | |
|
| 66794 | heme metabolism | 85.71 | 12 of 14 | |
|
| 66794 | citric acid cycle | 85.71 | 12 of 14 | |
|
| 66794 | reductive acetyl coenzyme A pathway | 85.71 | 6 of 7 | |
|
| 66794 | leucine metabolism | 84.62 | 11 of 13 | |
|
| 66794 | glycolysis | 82.35 | 14 of 17 | |
|
| 66794 | degradation of sugar acids | 80 | 20 of 25 | |
|
| 66794 | flavin biosynthesis | 80 | 12 of 15 | |
|
| 66794 | propionate fermentation | 80 | 8 of 10 | |
|
| 66794 | factor 420 biosynthesis | 80 | 4 of 5 | |
|
| 66794 | glycogen metabolism | 80 | 4 of 5 | |
|
| 66794 | vitamin B12 metabolism | 79.41 | 27 of 34 | |
|
| 66794 | alanine metabolism | 79.31 | 23 of 29 | |
|
| 66794 | tetrahydrofolate metabolism | 78.57 | 11 of 14 | |
|
| 66794 | glutamate and glutamine metabolism | 78.57 | 22 of 28 | |
|
| 66794 | NAD metabolism | 77.78 | 14 of 18 | |
|
| 66794 | allantoin degradation | 77.78 | 7 of 9 | |
|
| 66794 | vitamin B1 metabolism | 76.92 | 10 of 13 | |
|
| 66794 | histidine metabolism | 75.86 | 22 of 29 | |
|
| 66794 | glycogen biosynthesis | 75 | 3 of 4 | |
|
| 66794 | arginine metabolism | 75 | 18 of 24 | |
|
| 66794 | cyclohexanol degradation | 75 | 3 of 4 | |
|
| 66794 | lipid metabolism | 74.19 | 23 of 31 | |
|
| 66794 | tryptophan metabolism | 73.68 | 28 of 38 | |
|
| 66794 | isoprenoid biosynthesis | 73.08 | 19 of 26 | |
|
| 66794 | methionine metabolism | 73.08 | 19 of 26 | |
|
| 66794 | proline metabolism | 72.73 | 8 of 11 | |
|
| 66794 | vitamin B6 metabolism | 72.73 | 8 of 11 | |
|
| 66794 | d-xylose degradation | 72.73 | 8 of 11 | |
|
| 66794 | degradation of hexoses | 72.22 | 13 of 18 | |
|
| 66794 | propanol degradation | 71.43 | 5 of 7 | |
|
| 66794 | ubiquinone biosynthesis | 71.43 | 5 of 7 | |
|
| 66794 | oxidative phosphorylation | 71.43 | 65 of 91 | |
|
| 66794 | non-pathway related | 71.05 | 27 of 38 | |
|
| 66794 | myo-inositol biosynthesis | 70 | 7 of 10 | |
|
| 66794 | urea cycle | 69.23 | 9 of 13 | |
|
| 66794 | degradation of sugar alcohols | 68.75 | 11 of 16 | |
|
| 66794 | degradation of pentoses | 67.86 | 19 of 28 | |
|
| 66794 | sulfoquinovose degradation | 66.67 | 2 of 3 | |
|
| 66794 | acetyl CoA biosynthesis | 66.67 | 2 of 3 | |
|
| 66794 | cyanate degradation | 66.67 | 2 of 3 | |
|
| 66794 | acetoin degradation | 66.67 | 2 of 3 | |
|
| 66794 | lysine metabolism | 66.67 | 28 of 42 | |
|
| 66794 | d-mannose degradation | 66.67 | 6 of 9 | |
|
| 66794 | octane oxidation | 66.67 | 2 of 3 | |
|
| 66794 | IAA biosynthesis | 66.67 | 2 of 3 | |
|
| 66794 | cysteine metabolism | 66.67 | 12 of 18 | |
|
| 66794 | L-lactaldehyde degradation | 66.67 | 2 of 3 | |
|
| 66794 | glutathione metabolism | 64.29 | 9 of 14 | |
|
| 66794 | tyrosine metabolism | 64.29 | 9 of 14 | |
|
| 66794 | ascorbate metabolism | 63.64 | 14 of 22 | |
|
| 66794 | metabolism of disaccharids | 63.64 | 7 of 11 | |
|
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 62.5 | 5 of 8 | |
|
| 66794 | carnitine metabolism | 62.5 | 5 of 8 | |
|
| 66794 | 4-hydroxyphenylacetate degradation | 60 | 6 of 10 | |
|
| 66794 | metabolism of amino sugars and derivatives | 60 | 3 of 5 | |
|
| 66794 | lipoate biosynthesis | 60 | 3 of 5 | |
|
| 66794 | gallate degradation | 60 | 3 of 5 | |
|
| 66794 | degradation of aromatic, nitrogen containing compounds | 58.33 | 7 of 12 | |
|
| 66794 | aclacinomycin biosynthesis | 57.14 | 4 of 7 | |
|
| 66794 | 4-hydroxymandelate degradation | 55.56 | 5 of 9 | |
|
| 66794 | nitrate assimilation | 55.56 | 5 of 9 | |
|
| 66794 | phenol degradation | 55 | 11 of 20 | |
|
| 66794 | phenylpropanoid biosynthesis | 53.85 | 7 of 13 | |
|
| 66794 | sulfate reduction | 53.85 | 7 of 13 | |
|
| 66794 | polyamine pathway | 52.17 | 12 of 23 | |
|
| 66794 | lactate fermentation | 50 | 2 of 4 | |
|
| 66794 | mannosylglycerate biosynthesis | 50 | 1 of 2 | |
|
| 66794 | toluene degradation | 50 | 2 of 4 | |
|
| 66794 | aminopropanol phosphate biosynthesis | 50 | 1 of 2 | |
|
| 66794 | pantothenate biosynthesis | 50 | 3 of 6 | |
|
| 66794 | ribulose monophosphate pathway | 50 | 1 of 2 | |
|
| 66794 | dolichol and dolichyl phosphate biosynthesis | 50 | 1 of 2 | |
|
| 66794 | phenylmercury acetate degradation | 50 | 1 of 2 | |
|
| 66794 | vitamin E metabolism | 50 | 2 of 4 | |
|
| 66794 | butanoate fermentation | 50 | 2 of 4 | |
|
| 66794 | androgen and estrogen metabolism | 50 | 8 of 16 | |
|
| 66794 | ethanol fermentation | 50 | 1 of 2 | |
|
| 66794 | dTDPLrhamnose biosynthesis | 50 | 4 of 8 | |
|
| 66794 | CMP-KDO biosynthesis | 50 | 2 of 4 | |
|
| 66794 | quinate degradation | 50 | 1 of 2 | |
|
| 66794 | glycine metabolism | 50 | 5 of 10 | |
|
| 66794 | bile acid biosynthesis, neutral pathway | 47.06 | 8 of 17 | |
|
| 66794 | 3-phenylpropionate degradation | 46.67 | 7 of 15 | |
|
| 66794 | phosphatidylethanolamine bioynthesis | 46.15 | 6 of 13 | |
|
| 66794 | carotenoid biosynthesis | 45.45 | 10 of 22 | |
|
| 66794 | lipid A biosynthesis | 44.44 | 4 of 9 | |
|
| 66794 | daunorubicin biosynthesis | 44.44 | 4 of 9 | |
|
| 66794 | benzoyl-CoA degradation | 42.86 | 3 of 7 | |
|
| 66794 | hydrogen production | 40 | 2 of 5 | |
|
| 66794 | arachidonate biosynthesis | 40 | 2 of 5 | |
|
| 66794 | elloramycin biosynthesis | 40 | 2 of 5 | |
|
| 66794 | ethylmalonyl-CoA pathway | 40 | 2 of 5 | |
|
| 66794 | arachidonic acid metabolism | 38.89 | 7 of 18 | |
|
| 66794 | selenocysteine biosynthesis | 33.33 | 2 of 6 | |
|
| 66794 | chlorophyll metabolism | 33.33 | 6 of 18 | |
|
| 66794 | sphingosine metabolism | 33.33 | 2 of 6 | |
|
| 66794 | (5R)-carbapenem carboxylate biosynthesis | 33.33 | 1 of 3 | |
|
| 66794 | methane metabolism | 33.33 | 1 of 3 | |
|
| 66794 | coenzyme M biosynthesis | 30 | 3 of 10 | |
|
| 66794 | cholesterol biosynthesis | 27.27 | 3 of 11 | |
|
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 27.27 | 3 of 11 | |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 118857 | not determinedn.d. | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM9298v1 assembly for Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 | complete | GCA_000092985   | 446468.6  | 646564557  | 446468 | 99.26 | |
| 66792 | 56553_A01 assembly for Nocardiopsis dassonvillei NCTC10488 | complete | GCA_900638215 | 2014.5 | 8046265868 | 2014 | 99.04 | |
| 67770 | ASM1239634v1 assembly for Nocardiopsis dassonvillei ATCC 23218 | contig | GCA_012396345 | 2014.8 | 8115128942 | 2014 | 35.61 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | N.dassonvillei 16S rRNA gene | X97886 | 1461 |  | 446468 | |
| 67770 | Nocardiopsis dassonvillei gene for 16S ribosomal RNA, partial sequence | D85492 | 1483 | | 2014 | |
| 124043 | Nocardiopsis dassonvillei subsp. dassonvillei strain DSM 43111(T) 16S ribosomal RNA gene, partial sequence. | MN686689 | 468 | | 568208 | |
| 124043 | Nocardiopsis dassonvillei subsp. dassonvillei strain DSM 43111(T) 16S ribosomal RNA gene, partial sequence. | MN686653 | 549 | | 568208 | |
| 124043 | Nocardiopsis dassonvillei subsp. dassonvillei strain DSM 43111(T) 16S ribosomal RNA gene, partial sequence. | MN687834 | 515 | | 568208 | |
| 124043 | Nocardiopsis dassonvillei subsp. dassonvillei strain DSM 43111(T) 16S ribosomal RNA gene, partial sequence. | MN686666 | 525 | | 568208 | |
| 124043 | Nocardiopsis dassonvillei subsp. dassonvillei strain DSM 43111(T) 16S ribosomal RNA gene, partial sequence. | MN688239 | 544 | | 568208 | |
| 124043 | Nocardiopsis dassonvillei subsp. dassonvillei strain DSM 43111(T) 16S ribosomal RNA gene, partial sequence. | MN686612 | 515 | | 568208 | |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Insights into the biodegradation of polyhydroxyalkanoates by the tropical marine isolate, Nocardiopsis dassonvillei NCIM 5124. | Anjulal H, Singhvi M, Zinjarde S. | 3 Biotech | 10.1007/s13205-024-04079-3 | 2024 | | |
| Phylogeny | Isolation, Screening and Identification of Biosurfactant Producing Strain Nocardiopsis dassonvillei var B2 From Oil Contaminated Soil. | Panatula N, Guntuku G, Palla MS, Muthyala MKK, Meka M, Jagadeeswara Reddy D. | J Basic Microbiol | 10.1002/jobm.202400504 | 2024 | |
| Enzymology | Expression in Pichia pastoris of Thermostable Endo-1,4-beta-xylanase from the Actinobacterium Nocardiopsis halotolerans: Properties and Use for Saccharification of Xylan-Containing Products. | Lisov AV, Belova OV, Belov AA, Lisova ZA, Nagel AS, Shadrin AM, Andreeva-Kovalevskaya ZI, Nagornykh MO, Zakharova MV, Leontievsky AA. | Int J Mol Sci | 10.3390/ijms25169121 | 2024 | |
| Phylogeny | Fatal pulmonary infection related to Nocardiopsis dassonvillei in a patient with chronic obstructive pulmonary disease. | Scussel R, Lotte R, Gillon J, Chassang M, Boudoumi D, Ruimy R. | New Microbes New Infect | 10.1016/j.nmni.2020.100654 | 2020 | |
| A Mini-Review of Anti-Listerial Compounds from Marine Actinobacteria (1990-2023). | Ngema SS, Madoroba E. | Antibiotics (Basel) | 10.3390/antibiotics13040362 | 2024 | | |
| Role of fourteen XRE-DUF397 pairs from Streptomyces coelicolor as regulators of antibiotic production and differentiation. New players in a complex regulatory network. | Riascos C, Martinez-Carrasco A, Diaz M, Santamaria RI. | Front Microbiol | 10.3389/fmicb.2023.1217350 | 2023 | | |
| New Insights on Biological Activities, Chemical Compositions, and Classifications of Marine Actinomycetes Antifouling Agents. | Morgan RN, Ali AA, Alshahrani MY, Alshahrani MY, Alshahrani MY, Aboshanab KM. | Microorganisms | 10.3390/microorganisms11102444 | 2023 | | |
| An Isotopic Ratio Outlier Analysis Approach for Global Metabolomics of Biosynthetically Talented Actinomycetes. | Carey J, Nguyen T, Korchak J, Beecher C, de Jong F, Lane AL. | Metabolites | 10.3390/metabo9090181 | 2019 | | |
| Genetics | Mining of Microbial Genomes for the Novel Sources of Nitrilases. | Sharma N, Thakur N, Raj T, Savitri, Bhalla TC. | Biomed Res Int | 10.1155/2017/7039245 | 2017 | |
| Metabolism | In vivo characterization of the activities of novel cyclodipeptide oxidases: new tools for increasing chemical diversity of bioproduced 2,5-diketopiperazines in Escherichia coli. | Le Chevalier F, Correia I, Matheron L, Babin M, Moutiez M, Canu N, Gondry M, Lequin O, Belin P. | Microb Cell Fact | 10.1186/s12934-020-01432-y | 2020 | |
| Complete Draft Genome Sequence of the Actinobacterium Nocardiopsis sinuspersici UTMC102 (DSM 45277T), Which Produces Serine Protease. | Tokovenko B, Ruckert C, Kalinowski J, Mohammadipanah F, Wink J, Rosenkranzer B, Myronovskyi M, Luzhetskyy A. | Genome Announc | 10.1128/genomea.00362-17 | 2017 | | |
| Molecular Characterization of Plasmids Harbored by Actinomycetes Isolated From the Great Salt Plains of Oklahoma Using PFGE and Next Generation Whole Genome Sequencing. | Cornell CR, Marasini D, Marasini D, Fakhr MK. | Front Microbiol | 10.3389/fmicb.2018.02282 | 2018 | | |
| Phylogeny | Whole-genome sequence of Nocardiopsis alba strain ATCC BAA-2165, associated with honeybees. | Qiao J, Chen L, Li Y, Wang J, Zhang W, Chen S. | J Bacteriol | 10.1128/jb.01522-12 | 2012 | |
| Next generation sequencing data of a defined microbial mock community. | Singer E, Andreopoulos B, Bowers RM, Lee J, Deshpande S, Chiniquy J, Ciobanu D, Klenk HP, Zane M, Daum C, Clum A, Cheng JF, Copeland A, Woyke T. | Sci Data | 10.1038/sdata.2016.81 | 2016 | | |
| Isolation and characterization of the gene cluster for biosynthesis of the thiopeptide antibiotic TP-1161. | Engelhardt K, Degnes KF, Zotchev SB. | Appl Environ Microbiol | 10.1128/aem.01442-10 | 2010 | | |
| Antibiofilm activity of biosynthesized silver and copper nanoparticles using Streptomyces S29. | Elshaer S, Shaaban MI. | AMB Express | 10.1186/s13568-023-01647-3 | 2023 | | |
| Proteome | The fundamental tradeoff in genomes and proteomes of prokaryotes established by the genetic code, codon entropy, and physics of nucleic acids and proteins. | Goncearenco A, Berezovsky IN. | Biol Direct | 10.1186/s13062-014-0029-2 | 2014 | |
| Metabolism | Genes associated with 2-methylisoborneol biosynthesis in cyanobacteria: isolation, characterization, and expression in response to light. | Wang Z, Xu Y, Shao J, Wang J, Li R. | PLoS One | 10.1371/journal.pone.0018665 | 2011 | |
| Metabolism | Natural Product Potential of the Genus Nocardiopsis. | Ibrahim AH, Desoukey SY, Fouad MA, Kamel MS, Gulder TAM, Abdelmohsen UR. | Mar Drugs | 10.3390/md16050147 | 2018 | |
| LightCUD: a program for diagnosing IBD based on human gut microbiome data. | Xu C, Zhou M, Xie Z, Li M, Zhu X, Zhu H. | BioData Min | 10.1186/s13040-021-00241-2 | 2021 | | |
| Enzymology | Genome-guided Investigation of Antibiotic Substances produced by Allosalinactinospora lopnorensis CA15-2(T) from Lop Nor region, China. | Huang C, Leung RK, Guo M, Tuo L, Guo L, Yew WW, Lou I, Lee SMY, Sun C. | Sci Rep | 10.1038/srep20667 | 2016 | |
| The crystal structure of a bacterial Sufu-like protein defines a novel group of bacterial proteins that are similar to the N-terminal domain of human Sufu. | Das D, Finn RD, Abdubek P, Astakhova T, Axelrod HL, Bakolitsa C, Cai X, Carlton D, Chen C, Chiu HJ, Chiu M, Clayton T, Deller MC, Duan L, Ellrott K, Farr CL, Feuerhelm J, Grant JC, Grzechnik A, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kozbial P, Krishna SS, Kumar A, Lam WW, Marciano D, Miller MD, Morse AT, Nigoghossian E, Nopakun A, Okach L, Puckett C, Reyes R, Tien HJ, Trame CB, van den Bedem H, Weekes D, Wooten T, Xu Q, Yeh A, Zhou J, Hodgson KO, Wooley J, Elsliger MA, Deacon AM, Godzik A, Lesley SA, Wilson IA. | Protein Sci | 10.1002/pro.497 | 2010 | | |
| Genetics | Comparative genomic analysis of the genus Nocardiopsis provides new insights into its genetic mechanisms of environmental adaptability. | Li HW, Zhi XY, Yao JC, Zhou Y, Tang SK, Klenk HP, Zhao J, Li WJ. | PLoS One | 10.1371/journal.pone.0061528 | 2013 | |
| Metabolism | Genomics of aerobic cellulose utilization systems in actinobacteria. | Anderson I, Abt B, Lykidis A, Klenk HP, Kyrpides N, Ivanova N. | PLoS One | 10.1371/journal.pone.0039331 | 2012 | |
| Gene expression profiling gut microbiota in different races of humans. | Chen L, Zhang YH, Huang T, Cai YD. | Sci Rep | 10.1038/srep23075 | 2016 | | |
| Metabolism | Comparative studies on similarities and differences of cyclodipeptide oxidases for installation of C-C double bonds at the diketopiperazine ring. | Mikulski L, Schafer J, Brockmeyer K, Kraut R, Li SM. | Appl Microbiol Biotechnol | 10.1007/s00253-020-10392-7 | 2020 | |
| Transcriptome | In silico analysis highlights the frequency and diversity of type 1 lantibiotic gene clusters in genome sequenced bacteria. | Marsh AJ, O'Sullivan O, Ross RP, Cotter PD, Hill C. | BMC Genomics | 10.1186/1471-2164-11-679 | 2010 | |
| In silico characterization of pectate lyase protein sequences from different source organisms. | Dubey AK, Yadav S, Kumar M, Singh VK, Sarangi BK, Yadav D. | Enzyme Res | 10.4061/2010/950230 | 2010 | | |
| Pathogenicity | Effect of sulfonylurea tribenuron methyl herbicide on soil Actinobacteria growth and characterization of resistant strains. | Rachedi K, Zermane F, Tir R, Ayache F, Duran R, Lauga B, Karama S, Simon M, Boulahrouf A. | Braz J Microbiol | 10.1016/j.bjm.2017.05.004 | 2018 | |
| Metabolism | Discovery of nuclear-encoded genes for the neurotoxin saxitoxin in dinoflagellates. | Stuken A, Orr RJ, Kellmann R, Murray SA, Neilan BA, Jakobsen KS. | PLoS One | 10.1371/journal.pone.0020096 | 2011 | |
| Genetics | Inteins as indicators of gene flow in the halobacteria. | Soucy SM, Fullmer MS, Papke RT, Gogarten JP. | Front Microbiol | 10.3389/fmicb.2014.00299 | 2014 | |
| Enzymology | PKMiner: a database for exploring type II polyketide synthases. | Kim J, Yi GS. | BMC Microbiol | 10.1186/1471-2180-12-169 | 2012 | |
| Genetics | Developmental biology of Streptomyces from the perspective of 100 actinobacterial genome sequences. | Chandra G, Chater KF. | FEMS Microbiol Rev | 10.1111/1574-6976.12047 | 2014 | |
| Metabolism | Biosynthesis of a new UDP-sugar, UDP-2-acetamido-2-deoxyxylose, in the human pathogen Bacillus cereus subspecies cytotoxis NVH 391-98. | Gu X, Glushka J, Lee SG, Bar-Peled M. | J Biol Chem | 10.1074/jbc.m110.125872 | 2010 | |
| Metabolism | Cloning and analysis of the planosporicin lantibiotic biosynthetic gene cluster of Planomonospora alba. | Sherwood EJ, Hesketh AR, Bibb MJ. | J Bacteriol | 10.1128/jb.02291-12 | 2013 | |
| Enzymology | Evolutionary diversification and characterization of the eubacterial gene family encoding DXR type II, an alternative isoprenoid biosynthetic enzyme. | Carretero-Paulet L, Lipska A, Perez-Gil J, Sangari FJ, Albert VA, Rodriguez-Concepcion M. | BMC Evol Biol | 10.1186/1471-2148-13-180 | 2013 | |
| Genetics | Genome-Based Taxonomic Classification of the Phylum Actinobacteria. | Nouioui I, Carro L, Garcia-Lopez M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Goker M. | Front Microbiol | 10.3389/fmicb.2018.02007 | 2018 | |
| Metabolism | Diversity and evolution of the phenazine biosynthesis pathway. | Mavrodi DV, Peever TL, Mavrodi OV, Parejko JA, Raaijmakers JM, Lemanceau P, Mazurier S, Heide L, Blankenfeldt W, Weller DM, Thomashow LS. | Appl Environ Microbiol | 10.1128/aem.02009-09 | 2010 | |
| Phylogeny | Phylogenetic framework and molecular signatures for the main clades of the phylum Actinobacteria. | Gao B, Gupta RS. | Microbiol Mol Biol Rev | 10.1128/mmbr.05011-11 | 2012 | |
| Classifying nitrilases as aliphatic and aromatic using machine learning technique. | Sharma N, Verma R, Savitri, Bhalla TC. | 3 Biotech | 10.1007/s13205-018-1102-9 | 2018 | | |
| Rapid PCR Detection of Mycoplasma hominis, Ureaplasma urealyticum, and Ureaplasma parvum. | Cunningham SA, Mandrekar JN, Rosenblatt JE, Patel R. | Int J Bacteriol | 10.1155/2013/168742 | 2013 | | |
| Enzymology | Use of the BioMerieux ID 32C yeast identification system for identification of aerobic actinomycetes of medical importance. | Muir DB, Pritchard RC. | J Clin Microbiol | 10.1128/jcm.35.12.3240-3243.1997 | 1997 | |
| Surfactants tailored by the class Actinobacteria. | Kugler JH, Le Roes-Hill M, Syldatk C, Hausmann R. | Front Microbiol | 10.3389/fmicb.2015.00212 | 2015 | | |
| Phylogeny | Isolation and identification of endophytic actinobacteria from Citrullus colocynthis (L.) Schrad and their antibacterial properties. | Ali AR, Bahrami Y, Kakaei E, Mohammadzadeh S, Bouk S, Jalilian N. | Microb Cell Fact | 10.1186/s12934-022-01936-9 | 2022 | |
| Phylogeny | Characterization of Silver Carbonate Nanoparticles Biosynthesized Using Marine Actinobacteria and Exploring of Their Antimicrobial and Antibiofilm Activity. | Messaoudi O, Benamar I, Azizi A, Albukhaty S, Khane Y, Sulaiman GM, Salem-Bekhit MM, Hamdi K, Ghoummid S, Zoukel A, Messahli I, Kerchich Y, Benaceur F, Salem MM, Bendahou M. | Mar Drugs | 10.3390/md21100536 | 2023 | |
| An airborne actinobacteria Nocardiopsis alba isolated from bioaerosol of a mushroom compost facility. | Pasciak M, Pawlik K, Gamian A, Szponar B, Skora J, Gutarowska B. | Aerobiologia (Bologna) | 10.1007/s10453-014-9336-4 | 2014 | | |
| Overexpression, biochemical characterization, and structural modeling of polyhydroxybutyrate depolymerase from Nocardiopsis dassonvillei. | Anjulal H, Saha A, Barvkar VT, Pawar K, Joshi M, Zinjarde SS. | Enzyme Microb Technol | 10.1016/j.enzmictec.2025.110767 | 2026 | | |
| Coexpression of the Ectoine Biosynthetic Gene Cluster from Nocardiopsis dassonvillei NCIM 5124 in Escherichia coli by Using a Novel Strategy. | Kadam PM, Barvkar VT, Patil SS, Ahirrao SB, Zinjarde SS. | Curr Microbiol | 10.1007/s00284-025-04498-2 | 2025 | | |
| Transcriptome | The tropical marine actinomycete Nocardiopsis dassonvillei NCIM 5124 as novel source of ectoine: Genomic and transcriptomic insights. | Kadam P, Barvkar VT, Darshetkar AM, Zinjarde S. | Gene | 10.1016/j.gene.2024.148860 | 2024 | |
| Enzymology | Comprehensive updates on the biological features and metabolic potential of the versatile extremophilic actinomycete Nocardiopsis dassonvillei. | Bhairamkar S, Kadam P, Anjulal H, Joshi A, Chaudhari R, Bagul D, Javdekar V, Zinjarde S. | Res Microbiol | 10.1016/j.resmic.2023.104171 | 2024 | |
| Whole genome sequencing and functional analysis of a novel biofilm-eradicating strain Nocardiopsis lucentensis EMB25 | Goel N, Zaidi S, Khare SK. | World J Microbiol Biotechnol. | 2023 | | ||
| Genetics | Bioactivity of bacteria associated with Red Sea nudibranchs and whole genome sequence of Nocardiopsis dassonvillei RACA-4. | Elfeky HH, Hanora A, Solyman SM. | Mar Genomics | 10.1016/j.margen.2022.101004 | 2023 | |
| Genetics | Whole genome sequencing and functional analysis of a novel biofilm-eradicating strain Nocardiopsis lucentensis EMB25. | Goel N, Zaidi S, Khare SK. | World J Microbiol Biotechnol | 10.1007/s11274-023-03738-6 | 2023 | |
| Cytotoxic phenazine and antiallergic phenoxazine alkaloids from an arctic Nocardiopsis dassonvillei SCSIO 502F. | Song Y, Li QY, Cong MJ, Pang XY, Chen B, Liu YH, Liao L, Wang JF. | Nat Prod Bioprospect | 10.1007/s13659-023-00408-w | 2023 | | |
| Evaluation of Antimicrobial Activity by Marine Nocardiopsis dassonvillei against Foodborne Listeria monocytogenes and Shiga Toxin-Producing Escherichia coli. | Ngema SS, Khumalo SH, Ojo MC, Pooe OJ, Malilehe TS, Basson AK, Madoroba E. | Microorganisms | 10.3390/microorganisms11102539 | 2023 | | |
| Antibacterial angucyclinone and alpha-pyrone derivatives from desert-derived Nocardiopsis dassonvillei HDN 154151. | Tang Z, Chang Y, Zhu T, Che Q, Li D, Zhang G. | J Antibiot (Tokyo) | 10.1038/s41429-022-00526-6 | 2022 | | |
| Effective removal of heavy metals in industrial wastewater with novel bioactive catalyst enabling hybrid approach. | Rajivgandhi G, Gnanamangai BM, Ramachandran G, Chackaravarthy G, Chelliah CK, Maruthupandy M, Alharbi NS, Kadaikunnan S, Li WJ. | Environ Res | 10.1016/j.envres.2021.112337 | 2022 | | |
| Enzymology | Broad substrate scope C-C oxidation in cyclodipeptides catalysed by a flavin-dependent filament. | Sutherland E, Harding CJ, du Monceau de Bergendal T, Florence GJ, Ackermann K, Bode BE, Synowsky S, Sundaramoorthy R, Czekster CM. | Nat Commun | 10.1038/s41467-025-56127-y | 2025 | |
| Bacillus cereus is a key microbial determinant of intractable otitis media with effusion. | Fan Y, Chen J, Xu S, Zhou H, Shang Y, Tian X, Wang B, Zhao Y, Shan G, Zhao Y, Zhang P, Chen X. | Commun Med (Lond) | 10.1038/s43856-025-00876-w | 2025 | | |
| Exogenous production of cold-active cellulase from polar Nocardiopsis sp. with increased cellulose hydrolysis efficiency. | Sivasankar P, Poongodi S, Sivakumar K, Al-Qahtani WH, Arokiyaraj S, Jothiramalingam R. | Arch Microbiol | 10.1007/s00203-022-02830-z | 2022 | | |
| Dassonmycins A and B, Polycyclic Thioalkaloids from a Marine Sponge-Derived Nocardiopsis dassonvillei SCSIO 40065. | Zhang X, Chen S, Zhang L, Zhang Q, Zhang W, Chen Y, Zhang W, Zhang H, Zhang C. | Org Lett | 10.1021/acs.orglett.1c00328 | 2021 | | |
| Antimicrobial potential of actinomycetes from high altitude Nepalese soils. | Aryal S, Adhikari R, Regmi B, Joshi DR. | Sci Rep | 10.1038/s41598-025-09357-5 | 2025 | | |
| Phylogeny | Detection of anaerobic and aerobic bacteria from commercial tattoo and permanent makeup inks. | Yoon S, Kondakala S, Foley SL, Moon MS, Huang M-CJ, Periz G, Zang J, Katz LM, Kim S-J, Kweon O. | Appl Environ Microbiol | 10.1128/aem.00276-24 | 2024 | |
| Biochemical, thermodynamic and structural characteristics of a biotechnologically compatible alkaline protease from a haloalkaliphilic, Nocardiopsis dassonvillei OK-18. | Sharma AK, Kikani BA, Singh SP. | Int J Biol Macromol | 10.1016/j.ijbiomac.2020.03.006 | 2020 | | |
| Pathogenicity | Gold nanoparticles biosynthesized by Nocardiopsis dassonvillei NCIM 5124 enhance osteogenesis in gingival mesenchymal stem cells. | Bennur T, Javdekar V, Tomar GB, Zinjarde S. | Appl Microbiol Biotechnol | 10.1007/s00253-020-10508-z | 2020 | |
| Genetic and Phenotypic Heterogeneity of the Nocardiopsis alba Strains of Seawater. | Rathore DS, Sheikh MA, Gohel SD, Singh SP. | Curr Microbiol | 10.1007/s00284-021-02420-0 | 2021 | | |
| Biosynthesis of Silver Nanoparticles by Marine Actinobacterium Nocardiopsis dassonvillei and Exploring Their Therapeutic Potentials. | Khalil MA, El-Shanshoury AER, Alghamdi MA, Alsalmi FA, Mohamed SF, Sun J, Ali SS. | Front Microbiol | 10.3389/fmicb.2021.705673 | 2021 | | |
| Novel marine Nocardiopsis dassonvillei-DS013 mediated silver nanoparticles characterization and its bactericidal potential against clinical isolates. | Dhanaraj S, Thirunavukkarasu S, Allen John H, Pandian S, Salmen SH, Chinnathambi A, Alharbi SA. | Saudi J Biol Sci | 10.1016/j.sjbs.2020.01.003 | 2020 | | |
| Expanding the beta-Lactamase Family in the Human Microbiome. | Jia B, Baek JH, Lee JK, Sun Y, Kim KH, Jung JY, Jeon CO. | Adv Sci (Weinh) | 10.1002/advs.202403563 | 2024 | | |
| Phylogeny | Molecular identification and antibiotic resistance pattern of actinomycetes isolates among immunocompromised patients in Iran, emerging of new infections. | Rahdar HA, Mahmoudi S, Bahador A, Ghiasvand F, Sadeghpour Heravi F, Feizabadi MM. | Sci Rep | 10.1038/s41598-021-90269-5 | 2021 | |
| Isolation, characterization and screening of actinomycetes associated with fijian ant-plant symbioses. | Diarra U, Osborne-Naikatini T. | Microbiology (Reading) | 10.1099/mic.0.001410 | 2023 | | |
| Metabolism | Purification and characterization of a new thermophilic collagenase from Nocardiopsis dassonvillei NRC2aza and its application in wound healing. | Abood A, Salman AMM, Abdelfattah AM, El-Hakim AE, Abdel-Aty AM, Hashem AM. | Int J Biol Macromol | 10.1016/j.ijbiomac.2018.05.030 | 2018 | |
| Melanin pigments from sediment-associated Nocardiopsis sp. marine actinobacterium and antibacterial potential. | Sundar R, Sivaperumal P. | J Adv Pharm Technol Res | 10.4103/japtr.japtr_339_22 | 2022 | | |
| Rhizospheric-Derived Nocardiopsis alba BH35 as an Effective Biocontrol Agent Actinobacterium with Antifungal and Plant Growth-Promoting Effects: In Vitro Studies. | El-Sayed MH, Kobisi AEA, Elsehemy IA, El-Sakhawy MA. | J Microbiol Biotechnol | 10.4014/jmb.2301.01001 | 2023 | | |
| Pathogenicity | Characterisation and identification of antibacterial compound from marine actinobacteria: In vitro and in silico analysis. | Priyanka S, Jayashree M, Shivani R, Anwesha S, Bhaskara Rao KV, I AE. | J Infect Public Health | 10.1016/j.jiph.2018.09.005 | 2019 | |
| Improving protein hydrolysis and digestibility in Arthrospira platensis biomass through recombinant peptidases (EC 3.4): Opportunities for monogastric animal diets. | Spinola MP, Costa MM, Simoes RS, Fernandes VO, Cardoso V, Pires VMR, Afonso C, Cardoso C, Bandarra NM, Fontes CMGA, Prates JAM. | Heliyon | 10.1016/j.heliyon.2024.e41460 | 2025 | | |
| Synergistic Plant-Microbe Interactions between Endophytic Actinobacteria and Their Role in Plant Growth Promotion and Biological Control of Cotton under Salt Stress. | Mohamad OAA, Liu YH, Li L, Ma JB, Huang Y, Gao L, Fang BZ, Wang S, El-Baz AF, Jiang HC, Li WJ. | Microorganisms | 10.3390/microorganisms10050867 | 2022 | | |
| Bacterial synthesis of anisotropic gold nanoparticles. | Ahmady IM, Parambath JBM, Elsheikh EAE, Kim G, Han C, Perez-Garcia A, Mohamed AA. | Appl Microbiol Biotechnol | 10.1007/s00253-025-13438-w | 2025 | | |
| Phylogeny | Isolation and screening of Thermoactinomycetaceae family members as an extremophilic poor investigated and promising natural source of antimicrobial substances. | Seyed Shirazi SR, Hamedi J. | Iran J Microbiol | 10.18502/ijm.v15i1.11920 | 2023 | |
| Evaluating the Antagonistic Potential of Actinomycete Strains Isolated From Sudan's Soils Against Phytophthora infestans. | Abdelrahman O, Yagi S, El Siddig M, El Hussein A, Germanier F, De Vrieze M, L'Haridon F, Weisskopf L. | Front Microbiol | 10.3389/fmicb.2022.827824 | 2022 | | |
| Biotechnology | Coproduction of alkaline protease and xylanase from genetically modified Indonesian local Bacillus halodurans CM1 using corncob as an inducing substrate. | Putra IGEP, Ulfah M, Nurhayati N, Helianti I. | Saudi J Biol Sci | 10.1016/j.sjbs.2024.103947 | 2024 | |
| Effect of amino acids on the repression of alkaline protease synthesis in haloalkaliphilic Nocardiopsis dassonvillei. | Sharma AK, Singh SP. | Biotechnol Rep (Amst) | 10.1016/j.btre.2016.10.004 | 2016 | | |
| Genetics | Metapresence: a tool for accurate species detection in metagenomics based on the genome-wide distribution of mapping reads. | Sanguineti D, Zampieri G, Treu L, Campanaro S. | mSystems | 10.1128/msystems.00213-24 | 2024 | |
| Transcriptome | Transcriptome-Wide Identification and Expression Analysis of Genes Encoding Defense-Related Peptides of Filipendula ulmaria in Response to Bipolaris sorokiniana Infection. | Istomina EA, Korostyleva TV, Kovtun AS, Slezina MP, Odintsova TI. | J Fungi (Basel) | 10.3390/jof10040258 | 2024 | |
| Enzymology | Nasal vestibulitis due to Nocardiopsis dassonvillei in a diabetic patient. | Shivaprakash MR, Sumangala B, Prasanna H, Yenigalla BM, Munegowda KC, Ravi D, Chakrabarti A. | J Med Microbiol | 10.1099/jmm.0.038240-0 | 2012 | |
| Biodecolorization and Biodegradation of Azo Dye Reactive Orange-16 by Marine Nocardiopsis sp. | Chittal V, Gracias M, Anu A, Saha P, Bhaskara Rao KV. | Iran J Biotechnol | 10.29252/ijb.1551 | 2019 | | |
| The Metabolic Potential of Endophytic Actinobacteria Associated with Medicinal Plant Thymus roseus as a Plant-Growth Stimulator. | Mohamad OAA, Liu YH, Huang Y, Li L, Ma JB, Egamberdieva D, Gao L, Fang BZ, Hatab S, Jiang HC, Li WJ. | Microorganisms | 10.3390/microorganisms10091802 | 2022 | | |
| Antagonistic Strain Bacillus amyloliquefaciens XZ34-1 for Controlling Bipolaris sorokiniana and Promoting Growth in Wheat. | Yi Y, Shan Y, Liu S, Yang Y, Liu Y, Yin Y, Hou Z, Luan P, Li R. | Pathogens | 10.3390/pathogens10111526 | 2021 | | |
| Composition of nutrient media and temperature of cultivation imposes effect on the content of secondary metabolites of Nocardiopsis sp. isolated from a Siberian Cave. | Axenov-Gribanov DV, Morgunova MM, Vasilieva UA, Gamaiunov SV, Dmitrieva Krasnova ME, Pereliaeva EV, Belyshenko AY, Luzhetskyy AN. | 3 Biotech | 10.1007/s13205-021-02926-1 | 2021 | | |
| Genetics | Karakum desert: a unique source of cultivable novel and rare actinomycetes with a remarkable biosynthetic potential. | Saygin H, Sahin N, Goodfellow M. | World J Microbiol Biotechnol | 10.1007/s11274-025-04399-3 | 2025 | |
| The effects of antibiotics and illness on gut microbial composition in the fawn-footed mosaic-tailed rat (Melomys cervinipes). | Rymer TL, Pillay N. | PLoS One | 10.1371/journal.pone.0281533 | 2023 | | |
| Screening and Identification of a Streptomyces Strain with Quorum-Sensing Inhibitory Activity and Effect of the Crude Extracts on Virulence Factors of Pseudomonas aeruginosa. | Zhang Z, Sun Y, Yi Y, Bai X, Zhu L, Zhu J, Gu M, Zhu Y, Jiang L. | Microorganisms | 10.3390/microorganisms11082079 | 2023 | | |
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| Enzymology | A new alpha-pyrone from the deep-sea actinomycete Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111(T). | Zou G, Liao XJ, Peng Q, Chen GD, Wei FY, Xu ZX, Zhao BX, Xu SH | J Asian Nat Prod Res | 10.1080/10286020.2017.1307186 | 2017 | |
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| Phylogeny | Reclassification of Streptomyces flavidofuscus as a synonym of Nocardiopsis dassonvillei subsp. dassonvillei. | Tamura T, Ishida Y, Otoguro M, Hatano K, Suzuki K | Int J Syst Evol Microbiol | 10.1099/ijs.0.65559-0 | 2008 | |
| Phylogeny | Isolation of toxigenic Nocardiopsis strains from indoor environments and description of two new Nocardiopsis Species, N. exhalans sp. nov. and N. umidischolae sp. nov. | Peltola JS, Andersson MA, Kampfer P, Auling G, Kroppenstedt RM, Busse HJ, Salkinoja-Salonen MS, Rainey FA. | Appl Environ Microbiol | 10.1128/aem.67.9.4293-4304.2001 | 2001 | |
| Genetics | Nocardiopsis deserti sp. nov., isolated from a high altitude Atacama Desert soil. | Asem MD, Salam N, Idris H, Zhang XT, Bull AT, Li WJ, Goodfellow M. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004158 | 2020 | |
| Phylogeny | Nocardiopsis tropica sp. nov., Nocardiopsis trehalosi sp. nov., nom. rev. and Nocardiopsis dassonvillei subsp. albirubida subsp. nov., comb. nov. | Evtushenko LI, Taran VV, Akimov VN, Kroppenstedt RM, Tiedje JM, Stackebrandt E. | Int J Syst Evol Microbiol | 10.1099/00207713-50-1-73 | 2000 | |
| Phylogeny | Nocardiopsis dassonvillei subsp. crassaminis subsp. nov., isolated from freshwater sediment, and reappraisal of Nocardiopsis alborubida Grund and Kroppenstedt 1990 emend. Nouioui et al. 2018. | Camacho Pozo MI, Wieme AD, Perez SR, Llaurado Maury G, Snauwaert C, Lescaylle Veranes Y, Pena Zamora L, Schumann P, Vandamme P | Int J Syst Evol Microbiol | 10.1099/ijsem.0.004514 | 2020 | |
| Phylogeny | Nocardiopsis ansamitocini sp. nov., a new producer of ansamitocin P-3 of the genus Nocardiopsis. | Zhang YG, Liu Q, Wang HF, Park DJ, Guo JW, Kim CJ, Zhang YM, Li WJ | Int J Syst Evol Microbiol | 10.1099/ijsem.0.000703 | 2015 | |
| Phylogeny | Description of Nocardiopsis synnemataformans sp. nov., elevation of Nocardiopsis alba subsp. prasina to Nocardiopsis prasina comb. nov., and designation of Nocardiopsis antarctica and Nocardiopsis alborubida as later subjective synonyms of Nocardiopsis dassonvillei. | Yassin AF, Rainey FA, Burghardt J, Gierth D, Ungerechts J, Lux I, Seifert P, Bal C, Schaal KP | Int J Syst Bacteriol | 10.1099/00207713-47-4-983 | 1997 | |
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https://doi.org/10.13145/bacdive11166.20251217.10
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BacDive in 2025: the core database for prokaryotic strain data
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