Nocardioides maradonensis (DSM 19769, JCM 31980, KCTC 19384)

Name: Nocardioides maradonensis (DSM 19769, JCM 31980, KCTC 19384)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 11128

Type strain

Strain Designation RP-B30

Culture col. no. DSM 19769 JCM 31980 KCTC 19384 RP-B30

NCBI tax ID(s) 598611

Special Collections DSMZ JCM KCTC Wink compendium

History <- S. D. Lee, Jeju National Univ., Rep. of Korea; RP-B30 DSM 19769 <-- S. D. Lee; Jeju Natl. Univ., South Korea; RP-B30. <- SD Lee, Cheju Univ.

Links

Nocardioides maradonensis RP-B30 is an aerobe, mesophilic, Gram-positive prokaryote that was isolated from rhizosphere soil of Peucedanum japonicum Thunb..

Gram-positive aerobe mesophilic 16S sequence

Name and taxonomic classification

SI-ID 408096

KCTC 19384,JCM 31980,DSM 19769

@ref 20215

Last LPSN update 2026-02-09 11:20:27

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Propionibacteriales

Family Nocardioidaceae

Genus Nocardioides

Species Nocardioides maradonensis

Full scientific name Nocardioides maradonensis Lee et al. 2011

Morphology

Cell morphology

67771

Gram stainpositive

Colony morphology

@ref	Colony color	Medium used
69219	Dahlia yellow (1033)	suter without tyrosine
69219	Ivory (1014)	ISP 2
69219	Light ivory (1015)	ISP 5
69219	Light ivory (1015)	suter with tyrosine
69219	Oyster white (1013)	ISP 4
69219	Oyster white (1013)	ISP 7

Multicellular morphology

@ref	Complex name	Medium name
69219	Aerial mycelium	ISP 2
69219	Aerial mycelium	ISP 3
69219	Aerial mycelium	ISP 4
69219	Aerial mycelium	ISP 5
69219	Aerial mycelium	ISP 6
69219	Aerial mycelium	ISP 7
69219	Aerial mycelium	suter with tyrosine
69219	Aerial mycelium	suter without tyrosine

Pigmentation

@ref	Production	Name
69219		melanin pigment
69219		soluble pigment

Multimedia

@ref:	69219
multimedia content:	DSM_19769_image3.jpeg
multimedia.multimedia content:	DSM_19769_image3.jpeg
caption:	Plates (GYM, ISP2, ISP3, ISP4, ISP5, ISP7)
intellectual property rights:	Helmholtz-Zentrum für Infektionsforschung GmbH
manual_annotation:	1

@ref:	69219
multimedia content:	DSM_19769_image4.jpeg
multimedia.multimedia content:	DSM_19769_image4.jpeg
caption:	Plates (GYM, ISP2, ISP3, ISP4, ISP5, ISP7)
intellectual property rights:	Helmholtz-Zentrum für Infektionsforschung GmbH
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
8306	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
8306	R2A MEDIUM (DSMZ Medium 830)		Medium recipe at MediaDive	Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
8306	positive	growth	28	mesophilic
67770	positive	growth	28	mesophilic
67771	positive	growth	30	mesophilic

Physiology and metabolism

Oxygen tolerance

67771

Oxygen toleranceaerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
69219	NaCl	positive	growth	0-5 %

Observation

67770

Observationquinones: MK-8(H₄)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
69219	22599 ChEBI	arabinose	-	growth
69219	62968 ChEBI	cellulose	-	growth
68379	17634 ChEBI	D-glucose	-	fermentation	from API Coryne
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68379	16988 ChEBI	D-ribose	-	fermentation	from API Coryne
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68379	4853 ChEBI	esculin	-	hydrolysis	from API Coryne
69219	28757 ChEBI	fructose	+	growth
68379	5291 ChEBI	gelatin	-	hydrolysis	from API Coryne
69219	17234 ChEBI	glucose	+	growth
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
69219	17268 ChEBI	inositol	-	growth
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
68379	17306 ChEBI	maltose	-	fermentation	from API Coryne
69219	37684 ChEBI	mannose	-	growth
68379	17632 ChEBI	nitrate	-	reduction	from API Coryne
69219	16634 ChEBI	raffinose	-	growth
69219	26546 ChEBI	rhamnose	-	growth
68379	17992 ChEBI	sucrose	-	fermentation	from API Coryne
69219	17992 ChEBI	sucrose	+	growth
68379	16199 ChEBI	urea	-	hydrolysis	from API Coryne
69219	18222 ChEBI	xylose	-	growth

Enzymes

@ref	Value	Activity	Ec
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68379	alkaline phosphatase	-	3.1.3.1	from API Coryne
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68379	alpha-glucosidase	+	3.2.1.20	from API Coryne
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68379	beta-galactosidase	-	3.2.1.23	from API Coryne
68379	beta-glucosidase	-	3.2.1.21	from API Coryne
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
68382	esterase lipase (C 8)	+		from API zym
68379	gelatinase	-		from API Coryne
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API Coryne
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
68379	pyrrolidonyl arylamidase	-	3.4.19.3	from API Coryne
68382	trypsin	-	3.4.21.4	from API zym
68379	urease	-	3.5.1.5	from API Coryne

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
69219	-	-	-	-	-	-	+	-	-	-	-	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
69219	not determinedn.d.	-	+/-	+	-	+	+/-	+/-	-	-	+/-	+/-	-	-	-	+	+/-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Rhizosphere

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
8306	rhizosphere soil of Peucedanum japonicum Thunb.	Peucedanum japonicum	Jeju, Mara Island	Republic of Korea	KOR	Asia
67770	Rhizosphere soil of a cliff-associated plant (_n(Peucedanum japonicum) Thunb.) on Mara Island		Jeju	Republic of Korea	KOR	Asia
67771	From rhizosphere of plant		Mara island, Jeju	Republic of Korea	KOR	Asia

Taxonmaps

69479

Global distribution of 16S sequence FM998000 (>99% sequence identity) for Nocardioides maradonensis from Microbeatlas

Aquatic Samples	1
Soil Samples	14
Animal Samples	9
Plant Samples	13
Total Samples	37

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
8306	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
8306	Nocardioides sp. RP-B30 partial 16S rRNA gene, strain RP-B30	FM998000	1399		598611

GC content

@ref	GC-content (mol%)	Method
8306	71.7	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Nocardioides agrisoli sp. nov., isolated from farmland soil.	Wang X, Jiang WK, Cui MD, Yang ZG, Yu X, Hu G, Zhang H, Hong Q	Int J Syst Evol Microbiol	10.1099/ijsem.0.002158	2017
Phylogeny	Nocardioides daecheongensis sp. nov., isolated from soil.	Lim JM, Kim SJ, Hamada M, Ahn JH, Weon HY, Suzuki KI, Ahn TY, Kwon SW	Int J Syst Evol Microbiol	10.1099/ijs.0.063610-0	2014
Phylogeny	Nocardioides ultimimeridianus sp. nov. and Nocardioides maradonensis sp. nov., isolated from rhizosphere soil.	Lee DW, Lee SY, Yoon JH, Lee SD	Int J Syst Evol Microbiol	10.1099/ijs.0.022715-0	2010

References

#8306	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19769
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#69219	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Nocardioides maradonensis (DSM 19769, JCM 31980, KCTC 19384)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Multicellular morphology

Pigmentation

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Halophily

Observation

Metabolite utilization

Enzymes

API coryne

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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