Name: Kribbella hippodromi S1.4T
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 11080

Type strain:

Species: Kribbella hippodromi

Strain Designation: S1.4T

Culture col. no.: DSM 19227, JCM 15572, NRRL B-24553, NBRC 105866

Strain history: DSM 19227 <-- P. R. Meyers <-- G. J. Everest S1.4.

NCBI tax ID(s): 434347 (species)

SI-ID 396937

DSM 19227

Section

Kribbella hippodromi S1.4T is an aerobe, mesophilic, Gram-positive bacterium that builds an aerial mycelium and was isolated from soil.

Gram-positive
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Propionibacteriales*
	Family	*Kribbellaceae*
	Genus	*Kribbella*
	Species	**Kribbella hippodromi**
	Full Scientific Name (LPSN)	Kribbella hippodromi Everest and Meyers 2008

Information on morphological and physiological properties Morphology

[Ref.: #32298]	Gram stain	positive

[Ref.: #18331]	Colony color	Beige (1001)
[Ref.: #18331]	Incubation period	10-14 days
[Ref.: #18331]	Cultivation medium used	ISP 2

[Ref.: #18331]	Colony color	Beige (1001)
[Ref.: #18331]	Incubation period	10-14 days
[Ref.: #18331]	Cultivation medium used	ISP 3

[Ref.: #18331]	Colony color	Beige (1001)
[Ref.: #18331]	Incubation period	10-14 days
[Ref.: #18331]	Cultivation medium used	ISP 4

[Ref.: #18331]	Colony color	Beige (1001)
[Ref.: #18331]	Incubation period	10-14 days
[Ref.: #18331]	Cultivation medium used	ISP 5

[Ref.: #18331]	Colony color	Beige (1001)
[Ref.: #18331]	Incubation period	10-14 days
[Ref.: #18331]	Cultivation medium used	ISP 6

[Ref.: #18331]	Colony color	Beige (1001)
[Ref.: #18331]	Incubation period	10-14 days
[Ref.: #18331]	Cultivation medium used	ISP 7

[Ref.: #32298]

Pigment production

[Ref.: #18331]	Multicellular complex forming ability	yes
[Ref.: #18331]	Multicellular complex name	Aerial Mycelium
[Ref.: #18331]	Multicellular complex color	Cream
[Ref.: #18331]	Medium Name (multicellularity)	ISP 2

[Ref.: #18331]	Multicellular complex forming ability	yes
[Ref.: #18331]	Multicellular complex name	Aerial Mycelium
[Ref.: #18331]	Multicellular complex color	Cream
[Ref.: #18331]	Medium Name (multicellularity)	ISP 3

[Ref.: #18331]	Multicellular complex forming ability	yes
[Ref.: #18331]	Multicellular complex name	Aerial Mycelium
[Ref.: #18331]	Multicellular complex color	Cream
[Ref.: #18331]	Medium Name (multicellularity)	ISP 4

[Ref.: #18331]	Multicellular complex forming ability	no
[Ref.: #18331]	Medium Name (multicellularity)	ISP 5

[Ref.: #18331]	Multicellular complex forming ability	no
[Ref.: #18331]	Medium Name (multicellularity)	ISP 6

[Ref.: #18331]	Multicellular complex forming ability	yes
[Ref.: #18331]	Multicellular complex name	Aerial Mycelium
[Ref.: #18331]	Multicellular complex color	Cream
[Ref.: #18331]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7978]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #7978]

Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

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Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #7978]

Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

[Ref.: #18331]

Culture medium

ISP 2

[Ref.: #18331]

Culture medium growth

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Culture medium composition

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Culture medium

ISP 3

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Culture medium growth

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Culture medium composition

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Culture medium

ISP 4

[Ref.: #18331]

Culture medium growth

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Culture medium composition

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Culture medium

ISP 5

[Ref.: #18331]

Culture medium growth

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Culture medium composition

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[Ref.: #18331]

Culture medium

ISP 6

[Ref.: #18331]

Culture medium growth

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Culture medium composition

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[Ref.: #18331]

Culture medium

ISP 7

[Ref.: #18331]

Culture medium growth

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Culture medium composition

expand / minimize

		Temperature
[Ref.: #7978]	growth	28 °C
[Ref.: #18331]	optimum	28 °C
[Ref.: #32298]	growth	20-37 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #7978]	Temperature range	mesophilic
[Ref.: #18331]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #32298]			growth	05-09

Information on physiology and metabolism Physiology and metabolism

[Ref.: #32298]

Oxygen tolerance

aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #32298]		NaCl		growth	<6	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #18331]	arabinose ChEBI	-
[Ref.: #32298]	arabinose ChEBI	+	carbon source
[Ref.: #32298]	cellobiose ChEBI	+	carbon source
[Ref.: #18331]	cellulose ChEBI	+
[Ref.: #32298]	esculin ChEBI	+	hydrolysis
[Ref.: #18331]	fructose ChEBI	+
[Ref.: #32298]	fructose ChEBI	+	carbon source
[Ref.: #32298]	galactose ChEBI	+	carbon source
[Ref.: #18331]	glucose ChEBI	+
[Ref.: #32298]	glucose ChEBI	+	carbon source
[Ref.: #32298]	glycerol ChEBI	+	carbon source
[Ref.: #32298]	maltose ChEBI	+	carbon source
[Ref.: #18331]	mannitol ChEBI	+
[Ref.: #32298]	mannitol ChEBI	+	carbon source
[Ref.: #32298]	mannose ChEBI	+	carbon source
[Ref.: #32298]	melibiose ChEBI	+	carbon source
[Ref.: #18331]	myo-inositol ChEBI	-
[Ref.: #32298]	myo-inositol ChEBI	+	carbon source
[Ref.: #32298]	nitrate ChEBI	+	reduction
[Ref.: #18331]	raffinose ChEBI	+
[Ref.: #32298]	raffinose ChEBI	+	carbon source
[Ref.: #18331]	rhamnose ChEBI	+
[Ref.: #32298]	rhamnose ChEBI	+	carbon source
[Ref.: #32298]	ribitol ChEBI	+	carbon source
[Ref.: #32298]	salicin ChEBI	+	carbon source
[Ref.: #18331]	sucrose ChEBI	-
[Ref.: #32298]	sucrose ChEBI	+	carbon source
[Ref.: #32298]	trehalose ChEBI	+	carbon source
[Ref.: #18331]	xylose ChEBI	-
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #32298]		hydrogen sulfide ChEBI	yes

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	+	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	+	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	+	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #32298]	gelatinase	+
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	+		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #18331]	41	not determinedn.d.	+	-	-	+	+	+	-	-	+	+	-	+	+	-	+	+	+	+	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7978]	Sample type/isolated from	soil
[Ref.: #7978]	Geographic location (country and/or sea, region)	Kenilworth Racecource, Cape Town
[Ref.: #7978]	Country	South Africa
[Ref.: #7978]	Country ISO 3 Code	ZAF
[Ref.: #7978]	Continent	Africa

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Kenilworth Racecourse, Cape Town
[Ref.: #67770]	Country	South Africa
[Ref.: #67770]	Country ISO 3 Code	ZAF
[Ref.: #67770]	Continent	Africa
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence EF472955 (>99% sequence identity) for Kribbella from Microbeatlas

Aquatic Samples
Soil Samples	35
Animal Samples	7
Plant Samples	38
Total Samples	80

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #18331]	Biosafety level	1
[Ref.: #7978]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7978]	Kribbella hippodromi strain S1.4 16S ribosomal RNA gene, partial sequence	EF472955	1389	ENA	434347 tax ID

Availability in culture collections External links

[Ref.: #7978]

Culture collection no.

DSM 19227, JCM 15572, NRRL B-24553, NBRC 105866

[Ref.: #80329]

SI-ID 396937

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Kribbella pittospori sp. nov., an endophytic actinobacterium isolated from the surface-sterilized stem of an Australian native apricot tree, Pittosporum angustifolium.	Kaewkla O, Franco CMM	Int J Syst Evol Microbiol	10.1099/ijsem.0.001023	2016	*
Phylogeny	Kribbella hippodromi sp. nov., isolated from soil from a racecourse in South Africa.	Everest GJ, Meyers PR	Int J Syst Evol Microbiol	10.1099/ijs.0.65278-0	2008	*

References

#7978

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19227

#18331

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#32298

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28537 (see below)

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#80329

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID396937.1 )

#28537

IJSEM 443 2008 ( DOI 10.1099/ijs.0.65278-0 , PubMed 18218947 )

* These data were automatically processed and therefore are not curated

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