Kribbella hippodromi (DSM 19227, JCM 15572, NRRL B-24553)

Name: Kribbella hippodromi (DSM 19227, JCM 15572, NRRL B-24553)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 11080

Type strain

Strain Designation S1.4T

Culture col. no. DSM 19227 JCM 15572 NRRL B-24553 S1.4T NBRC 105866

NCBI tax ID(s) 434347

Special Collections DSMZ JCM Wink compendium Literature strains

History <- P.R. Meyers <-G.J. Everest; strain S1.4 DSM 19227 <-- P. R. Meyers <-- G. J. Everest S1.4.

Links

Kribbella hippodromi S1.4T is an aerobe, mesophilic, Gram-positive prokaryote that builds an aerial mycelium and was isolated from soil.

Gram-positive aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 396937

JCM 15572,NBRC 105866,DSM 19227

@ref 20215

Last LPSN update 2026-02-09 11:20:26

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Propionibacteriales

Family Kribbellaceae

Genus Kribbella

Species Kribbella hippodromi

Full scientific name Kribbella hippodromi Everest and Meyers 2008

Morphology

Cell morphology

32298

Gram stainpositive

Colony morphology

@ref	Colony color	Incubation period	Medium used
18331	Beige (1001)	10-14 days	ISP 2
18331	Beige (1001)	10-14 days	ISP 3
18331	Beige (1001)	10-14 days	ISP 4
18331	Beige (1001)	10-14 days	ISP 5
18331	Beige (1001)	10-14 days	ISP 6
18331	Beige (1001)	10-14 days	ISP 7

Multicellular morphology

@ref	Complex name	Complex color	Medium name
18331	Aerial Mycelium	Cream	ISP 2
18331	Aerial Mycelium	Cream	ISP 3
18331	Aerial Mycelium	Cream	ISP 4
18331			ISP 5
18331			ISP 6
18331	Aerial Mycelium	Cream	ISP 7

Pigmentation

32298

Productionno

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
7978	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
7978	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)	Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
18331	ISP 2		Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes
18331	ISP 3		Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms:
18331	ISP 4		Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml
18331	ISP 5		Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes
18331	ISP 6		Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes
18331	ISP 7		Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
7978	positive	growth	28	mesophilic
18331	positive	optimum	28	mesophilic
32298	positive	growth	20-37
67770	positive	growth	28	mesophilic

Culture pH

@ref	Ability	Type	PH	PH range
32298	positive	growth	05-09	alkaliphile

Physiology and metabolism

Oxygen tolerance

32298

Oxygen toleranceaerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
32298	NaCl	positive	growth	<6 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
18331	22599 ChEBI	arabinose	-
32298	22599 ChEBI	arabinose	+	carbon source
32298	17057 ChEBI	cellobiose	+	carbon source
18331	62968 ChEBI	cellulose	+
32298	4853 ChEBI	esculin	+	hydrolysis
18331	28757 ChEBI	fructose	+
32298	28757 ChEBI	fructose	+	carbon source
32298	28260 ChEBI	galactose	+	carbon source
18331	17234 ChEBI	glucose	+
32298	17234 ChEBI	glucose	+	carbon source
32298	17754 ChEBI	glycerol	+	carbon source
32298	17306 ChEBI	maltose	+	carbon source
18331	29864 ChEBI	mannitol	+
32298	29864 ChEBI	mannitol	+	carbon source
32298	37684 ChEBI	mannose	+	carbon source
32298	28053 ChEBI	melibiose	+	carbon source
18331	17268 ChEBI	myo-inositol	-
32298	17268 ChEBI	myo-inositol	+	carbon source
32298	17632 ChEBI	nitrate	+	reduction
18331	16634 ChEBI	raffinose	+
32298	16634 ChEBI	raffinose	+	carbon source
18331	26546 ChEBI	rhamnose	+
32298	26546 ChEBI	rhamnose	+	carbon source
32298	15963 ChEBI	ribitol	+	carbon source
32298	17814 ChEBI	salicin	+	carbon source
18331	17992 ChEBI	sucrose	-
32298	17992 ChEBI	sucrose	+	carbon source
32298	27082 ChEBI	trehalose	+	carbon source
18331	18222 ChEBI	xylose	-

Metabolite production

@ref	Chebi-ID	Metabolite	Production
32298	16136 ChEBI	hydrogen sulfide

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	+	3.2.1.51	from API zym
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	+	3.2.1.24	from API zym
68382	beta-galactosidase	+	3.2.1.23	from API zym
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
32298	gelatinase	+
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	+		from API zym
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
68382	trypsin	-	3.4.21.4	from API zym
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
18331	not determinedn.d.	+	-	-	+	+	+	-	-	+	+	-	+	+	-	+	+	+	+	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
7978	soil	Kenilworth Racecource, Cape Town	South Africa	ZAF	Africa
67770	Soil	Kenilworth Racecourse, Cape Town	South Africa	ZAF	Africa

Taxonmaps

69479

Global distribution of 16S sequence EF472955 (>99% sequence identity) for Kribbella from Microbeatlas

Aquatic Samples
Soil Samples	35
Animal Samples	7
Plant Samples	38
Total Samples	80

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
18331	1
7978	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM3953104v1 assembly for Kribbella hippodromi JCM 15572	scaffold	GCA_039531045	434347	55.34

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
7978	Kribbella hippodromi strain S1.4 16S ribosomal RNA gene, partial sequence	EF472955	1389		434347

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Kribbella pittospori sp. nov., an endophytic actinobacterium isolated from the surface-sterilized stem of an Australian native apricot tree, Pittosporum angustifolium.	Kaewkla O, Franco CMM	Int J Syst Evol Microbiol	10.1099/ijsem.0.001023	2016
Phylogeny	Kribbella hippodromi sp. nov., isolated from soil from a racecourse in South Africa.	Everest GJ, Meyers PR	Int J Syst Evol Microbiol	10.1099/ijs.0.65278-0	2008

References

#7978	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19227
#18331	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#28537	IJSEM 443 2008 ( DOI 10.1099/ijs.0.65278-0 , PubMed 18218947 )
#32298	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28537
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Kribbella hippodromi (DSM 19227, JCM 15572, NRRL B-24553)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Multicellular morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Halophily

Metabolite utilization

Metabolite production

Enzymes

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_039531045

16S sequences

Genome-based predictions

Literature

Literature

References

BacDive

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