Rhodococcus erythropolis (DSM 44587, JCM 11411, GTC 1041)

Name: Rhodococcus erythropolis (DSM 44587, JCM 11411, GTC 1041)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 11030

Type strain

Strain Designation A1-22

Culture col. no. DSM 44587 JCM 11411 GTC 1041 A1-22 NCIMB 14262 5 more

NCBI tax ID(s) 1219010 172041

Special Collections DSMZ JCM CIP Wink compendium Literature strains

History <- T. Ezaki, GIFU; GTC 1041 T. Ezaki A1-22. CIP <- 2004, JCM <- 2001, T. Ezaki: strain A1-22

Links

Rhodococcus erythropolis A1-22 is an obligate aerobe, Gram-positive, coccus-shaped bacterium that was isolated from air in Russian space station MIR.

Gram-positive coccus-shaped obligate aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 131533

JCM 11411,DSM 44587,NBRC 100611,CIP 108436,IAM 15238,BCRC 16819,CCRC 16819

@ref 20215

Last LPSN update 2026-02-09 11:20:25

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Nocardiaceae

Genus Rhodococcus

Species Rhodococcus erythropolis

Full scientific name Rhodococcus erythropolis (Gray and Thornton 1928) Goodfellow and Alderson 1979 (Approved Lists 1980)

Synonyms (9)

Arthrobacter picolinophilus
Rhodococcus qingshengii
"Nocardia erythropolis"
Rhodococcus enclensis
"Mycobacterium erythropolis"
Rhodococcus baikonurensis
Rhodococcus degradans
Nocardia calcarea
Rhodococcus jialingiae

BacDive ID	Other strains from **Rhodococcus erythropolis** (67)	Type strain
10866	R. erythropolis A-0201, N11, DSM 43066, ATCC 25544, ATCC ... (type strain)
10851	R. erythropolis huber, 2411, DSM 312, ATCC 15591, CCUG 27198
10852	R. erythropolis B-297, DSM 313, ATCC 19140
10853	R. erythropolis DSM 743, ATCC 25544, CCM 277, NCIB 9158
10854	R. erythropolis B-286, DSM 772, DSM 43296
10855	R. erythropolis HA1, DSM 6344
10856	R. erythropolis CAA2, DSM 7337
10857	R. erythropolis MPropP3, DSM 8424
10858	R. erythropolis MP50, DSM 9675
10859	R. erythropolis C3II, DSM 9685
10860	R. erythropolis K2a, DSM 11397
10861	R. erythropolis EK2, DSM 12788
10862	R. erythropolis EK5, DSM 12789
10863	R. erythropolis DSM 20665, ATCC 27854, JCM 11573, CCM 2769, ...
10864	R. erythropolis T-16, DSM 43135, LBG A 3116, NCIB 9409, ETH ...
10865	R. erythropolis No 52, DSM 43060, ATCC 11048, CCM 2595, NCIB ...
10867	R. erythropolis DSM 43188, ATCC 19369, CBS 613.67, CCM 2597, ...
10868	R. erythropolis DSM 43200, DSM 314, NCIB 9905
10869	R. erythropolis A 20-17, Schering 254, DSM 43288, ATCC 14559
10870	R. erythropolis B-286, Schering 270, DSM 43296, ATCC 17895
10871	R. erythropolis B-285, Schering 271, DSM 43297, ATCC 17896
10872	R. erythropolis DSM 43574, CBS 611.67, SN 6400
10873	R. erythropolis TTD-1, DSM 43933
10874	R. erythropolis N63, DSM 43958
10876	R. erythropolis N60, DSM 43957
10877	R. erythropolis DSM 44235
10878	R. erythropolis 404-97, H1aT1, PWD28, DSM 44308
10879	R. erythropolis MAWF, DSM 44522
10880	R. erythropolis DTB, DSM 44534
10914	R. erythropolis 81 N Fr, DSM 43590
103558	R. erythropolis ST033319(HKI),
130481	R. erythropolis DSM 26610, NCIMB 8147
131916	R. erythropolis Stev11, DSM 103048
134648	R. erythropolis TA 57, CIP 107391
137083	R. erythropolis CIP 104497, ATCC 15963, IAM 1399, IFO 12538, ...
137086	R. erythropolis P-8-1, CIP 104499, ATCC 15961, IAM 1484, ...
137088	R. erythropolis CIP 104500, ATCC 15962, IAM 1494, JCM 2895
137854	R. erythropolis IFP 192 P, CIP 101879
138041	R. erythropolis CIP 102573
138089	R. erythropolis CIP 104646, ATCC 21035, IFO 12320
138358	R. erythropolis CIP 106505, NRRL B-16531, ATCC 15960, JCM ...
139251	R. erythropolis CIP 104647, IAM 1414, IFO 12539, JCM 20158, ...
139773	R. erythropolis ACN1, DSM 105063
145711	R. erythropolis CCUG 29360
146519	R. erythropolis CCUG 31366
146583	R. erythropolis CCUG 31495
150997	R. erythropolis CCUG 42976
151111	R. erythropolis CCUG 43294
151622	R. erythropolis CCUG 44470
152104	R. erythropolis CCUG 45793
152657	R. erythropolis CCUG 47303
152710	R. erythropolis CCUG 47441
152741	R. erythropolis CCUG 47521
154681	R. erythropolis CCUG 54830
156842	R. erythropolis CCUG 66020
157817	R. erythropolis BG43, DSM 46869
157818	R. erythropolis Stevenage 150518_C15, DSM 107796
160170	R. erythropolis CCMMB1294, GK12, DSM 102980
162788	R. erythropolis JCM 20154, IAM 1400
162791	R. erythropolis JCM 20161, CIP 104648, IAM 1428, IFO 12540, ...
162792	R. erythropolis JCM 20165, IAM 1440
162796	R. erythropolis JCM 20170, IAM 1452
162803	R. erythropolis JCM 20186, IAM 1503
163709	R. erythropolis JCM 3011, CGMCC 4.1481, IFM 0020
166074	R. erythropolis JCM 9803
166075	R. erythropolis JCM 9804
166076	R. erythropolis JCM 9805

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
30012	positive	coccus-shaped
116711	positive	rod-shaped

Colony morphology

@ref	Colony color	Incubation period	Medium used
20076	Beige red (3012)	10-14 days	ISP 2
20076	Ivory (1014)	10-14 days	ISP 3
20076	Beige (1001)	10-14 days	ISP 4
20076	Ivory (1014)	10-14 days	ISP 5
20076	Ivory (1014)	10-14 days	ISP 6
20076	Beige red (3012)	10-14 days	ISP 7
116711

Multicellular morphology

@ref	Forms multicellular complex	Medium name
20076		ISP 2
20076		ISP 3
20076		ISP 4
20076		ISP 5
20076		ISP 6
20076		ISP 7

Pigmentation

30012

Productionno

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
11902	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)	Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
20076	ISP 2		Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes
20076	ISP 3		Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms:
20076	ISP 4		Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml
20076	ISP 5		Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes
20076	ISP 6		Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes
20076	ISP 7		Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes
34000	MEDIUM 29- Brain heart agar		Distilled water make up to (1000.000 ml);Brain heart infusion agar (52.000 g)
116711	CIP Medium 72	Medium recipe at CIP
116711	CIP Medium 29	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
11902	positive	growth	28
20076	positive	optimum	28
30012	positive	optimum	30
34000	positive	growth	30
67770	positive	growth	28
116711	positive	growth	10-30
116711	negative	growth	37
116711	negative	growth	41
116711	negative	growth	45

Physiology and metabolism

Oxygen tolerance

116711

Oxygen toleranceobligate aerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
116711	NaCl	positive	growth	0-6 %
116711	NaCl		growth	8 %
116711	NaCl		growth	10 %

Observation

67770

Observationquinones: MK-8(H₂)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30012	28644 ChEBI	2-oxopentanoate	+	carbon source
30012	30089 ChEBI	acetate	+	carbon source
20076	22599 ChEBI	arabinose	-
30012	22653 ChEBI	asparagine	+	carbon source
20076	62968 ChEBI	cellulose	-
116711	16947 ChEBI	citrate	-	carbon source
30012	4853 ChEBI	esculin	+	hydrolysis
68379	4853 ChEBI	esculin	+	hydrolysis	from API Coryne
116711	4853 ChEBI	esculin	-	hydrolysis
20076	28757 ChEBI	fructose	+
30012	28757 ChEBI	fructose	+	carbon source
68379	5291 ChEBI	gelatin	-	hydrolysis	from API Coryne
30012	24265 ChEBI	gluconate	+	carbon source
20076	17234 ChEBI	glucose	+
30012	29987 ChEBI	glutamate	+	carbon source
116711	606565 ChEBI	hippurate	-	hydrolysis
30012	21217 ChEBI	L-alaninamide	+	carbon source
30012	24996 ChEBI	lactate	+	carbon source
30012	25115 ChEBI	malate	+	carbon source
20076	29864 ChEBI	mannitol	+
30012	37684 ChEBI	mannose	+	carbon source
30012	51850 ChEBI	methyl pyruvate	+	carbon source
20076	17268 ChEBI	myo-inositol	+
116711	17632 ChEBI	nitrate	-	reduction
116711	17632 ChEBI	nitrate	-	respiration
116711	16301 ChEBI	nitrite	-	reduction
30012	17272 ChEBI	propionate	+	carbon source
30012	17148 ChEBI	putrescine	+	carbon source
30012	15361 ChEBI	pyruvate	+	carbon source
20076	16634 ChEBI	raffinose	-
20076	26546 ChEBI	rhamnose	-
30012	33942 ChEBI	ribose	+	carbon source
30012	30031 ChEBI	succinate	+	carbon source
20076	17992 ChEBI	sucrose	+
68379	17992 ChEBI	sucrose	-	fermentation	from API Coryne
30012	53423 ChEBI	tween 40	+	carbon source
30012	53426 ChEBI	tween 80	+	carbon source
68379	16199 ChEBI	urea	+	hydrolysis	from API Coryne
20076	18222 ChEBI	xylose	-

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
116711	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
116711	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
116711	15688 ChEBI	acetoin	-
116711	17234 ChEBI	glucose		-

Enzymes

@ref	Value	Activity	Ec
116711	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68379	alkaline phosphatase	-	3.1.3.1	from API Coryne
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68379	alpha-glucosidase	+	3.2.1.20	from API Coryne
68382	alpha-mannosidase	-	3.2.1.24	from API zym
116711	amylase	-
68382	beta-galactosidase	-	3.2.1.23	from API zym
116711	beta-galactosidase	-	3.2.1.23
68379	beta-galactosidase	-	3.2.1.23	from API Coryne
68382	beta-glucosidase	+	3.2.1.21	from API zym
68379	beta-glucosidase	+	3.2.1.21	from API Coryne
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
116711	caseinase	-	3.4.21.50
30012	catalase	+	1.11.1.6
116711	catalase	+	1.11.1.6
68382	cystine arylamidase	+	3.4.11.3	from API zym
116711	DNase	-
68382	esterase lipase (C 8)	+		from API zym
116711	gamma-glutamyltransferase	-	2.3.2.2
116711	gelatinase	+/-
68379	gelatinase	-		from API Coryne
116711	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
116711	lipase	-
68382	lipase (C 14)	-		from API zym
116711	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API Coryne
116711	ornithine decarboxylase	-	4.1.1.17
116711	oxidase	-
116711	phenylalanine ammonia-lyase	-	4.3.1.24
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
116711	tryptophan deaminase	-
116711	tween esterase	-
30012	urease	+	3.5.1.5
116711	urease	+	3.5.1.5
68379	urease	+	3.5.1.5	from API Coryne
68382	valine arylamidase	+		from API zym

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
20076	not determinedn.d.	-	+/-	-	-	-	+	-	+	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	-	not determinedn.d.	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
20076	not determinedn.d.	+	-	+	-	+	+	+	+	-	-	-	-	-	-	+	+	-	-	-
116711	-	+	+	+	-	+	+	+	-	-	+	+	-	-	-	+	+	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
116711	not determinedn.d.	+	+	+	+	+	+	-	+	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	+	-	+	-	-	+	+	+	+	+	+	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	+	-	-	-	+	-	+	+	+	+	+	+	-	-	+	+	-	-	-	+	+	-	+	-	-	-	+	+	-	-	+	+	-	+	-	+	-	+	-	+	+	+	-	+	+	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Air	#Indoor Air

Isolation

@ref	Sample type
11902	air in Russian space station MIR
67770	Air in the Russian space station Mir
116711	Environment, Air in the Russian station Mir

Taxonmaps

69479

Global distribution of 16S sequence AB071951 (>99% sequence identity) for Nocardiaceae from Microbeatlas

Aquatic Samples	6494
Soil Samples	7777
Animal Samples	11681
Plant Samples	2835
Total Samples	28787

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
11902	1	Risk group (German classification) According to TRBA 466
20076	1	German classification According to TRBA 466
116711	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM4242940v1 assembly for Rhodococcus baikonurensis JCM 11411	scaffold	GCA_042429405	172041	41.09
124043	ASM3953594v1 assembly for Rhodococcus baikonurensis JCM 11411	contig	GCA_039535945	172041

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
11902	Rhodococcus baikonurensis gene for 16S rRNA, partial sequence	AB071951	1348		172041

GC content

@ref	GC-content (mol%)	Method
30012	55.5
67770	55.5	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Rhodococcus erythropolis MTHt3 biotransforms ergopeptines to lysergic acid.	Thamhesl M, Apfelthaler E, Schwartz-Zimmermann HE, Kunz-Vekiru E, Krska R, Kneifel W, Schatzmayr G, Moll WD.	BMC Microbiol	10.1186/s12866-015-0407-7	2015
Metabolism	Enhanced biodegradation of diesel oil by a newly identified Rhodococcus baikonurensis EN3 in the presence of mycolic acid.	Lee M, Kim MK, Singleton I, Goodfellow M, Lee ST	J Appl Microbiol	10.1111/j.1365-2672.2005.02756.x	2006
Phylogeny	Rothia aeria sp. nov., Rhodococcus baikonurensis sp. nov. and Arthrobacter russicus sp. nov., isolated from air in the Russian space laboratory Mir.	Li Y, Kawamura Y, Fujiwara N, Naka T, Liu H, Huang X, Kobayashi K, Ezaki T	Int J Syst Evol Microbiol	10.1099/ijs.0.02828-0	2004
Phylogeny	Rhodococcus jialingiae sp. nov., an actinobacterium isolated from sludge of a carbendazim wastewater treatment facility.	Wang Z, Xu J, Li Y, Wang K, Wang Y, Hong Q, Li WJ, Li SP	Int J Syst Evol Microbiol	10.1099/ijs.0.013219-0	2009
Phylogeny	Rhodococcus qingshengii sp. nov., a carbendazim-degrading bacterium.	Xu JL, He J, Wang ZC, Wang K, Li WJ, Tang SK, Li SP	Int J Syst Evol Microbiol	10.1099/ijs.0.65095-0	2007

References

#11902	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44587
#20076	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#26376	IJSEM 827 2004 ( DOI 10.1099/ijs.0.02828-0 , PubMed 15143031 )
#30012	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26376
#34000	; Curators of the CIP;
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#116711	Collection of Institut Pasteur ; Curators of the CIP; CIP 108436
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Rhodococcus erythropolis (DSM 44587, JCM 11411, GTC 1041)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Multicellular morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Halophily

Observation

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

API coryne

API zym

API biotype100

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_042429405

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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