Acetobacter pomorum (DSM 11825, LTH 2458, CIP 105762)

Name: Acetobacter pomorum (DSM 11825, LTH 2458, CIP 105762)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 11

Type strain

Culture col. no. DSM 11825 LTH 2458 CIP 105762

NCBI tax ID(s) 1307917 65959

Special Collections DSMZ Literature strains CIP

History DSMZ <- S. J. Sokollek and W. P. Hammes CIP <- 1998, G. Schüller, Univ. Hohenheim, Stuttgart, Germany: strain LTH 2458 CIP <- 1998, G. Schüller, Hohenheim Univ., Stuttgart, Germany: strain LTH 2458

Links

Acetobacter pomorum DSM 11825 is an aerobe bacterium that forms circular colonies and was isolated from industrial cider vinegar fermentation.

colony-forming aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 12783

LMG 18848,DSM 11825,CIP 105762,NCIMB 13558,BCRC 17056,CCRC 17056,VTT E-042090,BCC 40089,TBRC 4568

@ref 20215

Last LPSN update 2026-05-29 08:24:55

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodospirillales

Family Acetobacteraceae

Genus Acetobacter

Species Acetobacter pomorum

Full scientific name Acetobacter pomorum Sokollek et al. 1998

Morphology

Cell morphology

@ref	Cell length	Cell width	Gram stain	Cell shape	Confidence
23232	1.3-1.6 µm	0.8-1.2 µm
121936			negative	rod-shaped
125438			negative		95.833

Colony morphology

@ref	Colony size	Colony color	Colony shape	Medium used
23232	0.8-1.5 mm	beige	circular	RAE agar

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
4505	SABOURAND GLUCOSE MEDIUM (DSMZ Medium 1429)	Medium recipe at MediaDive	Name: SABOURAUD GLUCOSE MEDIUM (DSMZ Medium 1429) Composition: SABOURAUD- Glucose-Bouillon 30.0 g/l Agar 15.0 g/l Distilled water
4505	RAE MEDIUM (DSMZ Medium 848)	Medium recipe at MediaDive	Name: RAE MEDIUM (DSMZ Medium 848) Composition: Glucose 40.0 g/l Yeast extract 10.0 g/l Peptone 10.0 g/l Na2HPO4 x 2 H2O 3.38 g/l Citric acid x H2O 1.5 g/l Glacial acetic acid Absolute ethanol Distilled water
23232	AE broth		3% (v/v) ethanol and 0, 1, 2, 3, 4, 5, 6, 7 and 8% (w/v) acetic acid
23232	RAE agar
32837	MEDIUM 289 - for Acetobacter intermedius		Distilled water make up to (940.000 ml);Agar (8.000 g);Glucose (7.500 g);Yeast extract (3.000 g);Peptone (4.000 g);Acetic acid (30.000 ml);Ethanol (30.000 ml)
121936	CIP Medium 289	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
4505	positive	growth	30
23232	positive	growth	30
32837	positive	growth	30
121936	positive	growth	22-37
121936	negative	growth	10
121936	negative	growth	41
121936	negative	growth	45

Culture pH

@ref	Ability	Type	PH
23232		growth	2.5

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
23232	aerobe
121936	obligate aerobe

Spore formation

@ref	Spore formation	Confidence
125439		99.007
125438		93.026

Halophily

@ref	Salt	Growth	Tested relation	Concentration
121936	NaCl	positive	growth	0 %
121936	NaCl		growth	2 %
121936	NaCl		growth	4 %
121936	NaCl		growth	6 %
121936	NaCl		growth	8 %
121936	NaCl		growth	10 %

Tolerance

@ref	Compound	Percentage
23232	Ethanol
23232	Lactate
23232	D-Glucose	30

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
23232	16808 ChEBI	2-dehydro-D-gluconate	-
23232	30089 ChEBI	acetate	-	growth
23232	15824 ChEBI	D-fructose	+	growth
23232	8391 ChEBI	D-gluconate	-	growth
23232	17634 ChEBI	D-glucose	+	growth
23232	16899 ChEBI	D-mannitol	+	growth
23232	16988 ChEBI	D-ribose	+	growth
23232	65327 ChEBI	D-xylose	+	growth
23232	16016 ChEBI	dihydroxyacetone	+
23232	16236 ChEBI	ethanol	+	growth
23232	17754 ChEBI	glycerol	+	growth
121936	606565 ChEBI	hippurate	-	hydrolysis
23232	24996 ChEBI	lactate	-	growth
23232	17306 ChEBI	maltose	+	growth
23232	17790 ChEBI	methanol	+	growth
121936	17632 ChEBI	nitrate	-	reduction
121936	16301 ChEBI	nitrite	-	reduction
23232	28831 ChEBI	propanol	+	growth
23232	30911 ChEBI	sorbitol	+	growth
23232	17992 ChEBI	sucrose	-	growth

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
121936	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite
23232	16808 ChEBI	2-dehydro-D-gluconate
23232	62968 ChEBI	cellulose
23232	16016 ChEBI	dihydroxyacetone

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
121936	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
121936	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
121936	gamma-glutamyltransferase	-	2.3.2.2
121936	gelatinase	-
68382	leucine arylamidase	-	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
121936	oxidase	-
68382	trypsin	-	3.4.21.4	from API zym
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
121936	-	-	+	+	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Food production	#Fermented
#Engineered	#Industrial	-
#Engineered	#Food production	#Beverage

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date	Enrichment culture	Enrichment culture composition	Enrichment culture duration	Enrichment culture temperature
4505	industrial cider vinegar fermentation	southern Germany	Germany	DEU	Europe
23232							YPM	yeast extract, 5 g; peptone, 3 g; and mannitol, 25 g	10 days	30
121936	Food, Apple vinegar	Southern	Germany	DEU	Europe	1998

Taxonmaps

69479

Global distribution of 16S sequence JF793971 (>99% sequence identity) for Acetobacter from Microbeatlas

Aquatic Samples	1945
Soil Samples	1742
Animal Samples	7743
Plant Samples	937
Total Samples	12367

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
4505	1	Risk group (German classification) According to TRBA 466
121936	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	Acetobacter pomorum DSM 11825	complete			2828617574	65959	85.46
66792	Acetobacter pomorum strain DSM 11825	contig		65959.23		65959	64.13
124043	ASM2599545v1 assembly for Acetobacter pomorum DSM 11825	contig	GCA_025995455	1307917.3	8119186578	1307917	0

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Acetobacter pomorum strain DSM 11825 16S ribosomal RNA gene, partial sequence	JF793971	1351		65959
4505	Acetobacter pomorum 16S ribosomal RNA gene	AJ001632	1491		65959

GC content

@ref	GC-content (mol%)	Method
4505	50.5	thermal denaturation, midpoint method (Tm)
23232	50.50	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM2599545v1 assembly for Acetobacter pomorum DSM 11825
NCBI: GCA_025995455

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	59.07	no
125439	gram_stain	BacteriaNetⓘ	negative	83.20	no
125439	motility	BacteriaNetⓘ	yes	40.98	no
125439	spore_formation	BacteriaNetⓘ	no	99.01	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Acetobacter pomorum strain DSM 11825
PATRIC: 65959.23

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	95.83	no
125438	anaerobic	anaerobicⓘ	no	92.37	yes
125438	spore-forming	spore-formingⓘ	no	93.03	no
125438	aerobic	aerobicⓘ	yes	80.02	yes
125438	thermophilic	thermophileⓘ	no	95.08	yes
125438	flagellated	motile2+ⓘ	yes	58.34	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Gut microbiome and host TOR pathway interact to regulate predator-induced aversive memory in Drosophila melanogaster.	Chen HY, Wu PS, Li ZY, Liu YC, Yeh SR, Duan BC, Cheng KW, Hsu CC, Chiu YL, Lee WT, Fan SZ, Wang PY.	Proc Natl Acad Sci U S A	10.1073/pnas.2422928122	2025
	The influence of Acetobacter pomorum bacteria on the developmental progression of Drosophila suzukii via gluconic acid secretion.	Bing XL, Liang ZJ, Tian J, Gong X, Huang SQ, Chen J, Hong XY.	Mol Ecol	10.1111/mec.17202	2024
	Microbial characterization of Sichuan Baoning vinegar: lactic acid bacteria, acetic acid bacteria and yeasts.	Wu J, Li Q, Hu K, Li J, Duran-Guerrero E, Liu S, Guo M, Liu A.	Arch Microbiol	10.1007/s00203-023-03784-6	2024
Genetics	Metagenomic insights into microbial community succession and its functional changes during the stage of acetic acid fermentation of shanxi aged vinegar.	Yang L, Yan Y, Shen J, Xia Y, Lang F, Chen C, Zou W.	BMC Microbiol	10.1186/s12866-025-04053-w	2025
	Acetobacter pomorum in the Drosophila gut microbiota buffers against host metabolic impacts of dietary preservative formula and batch variation in dietary yeast.	Sannino DR, Dobson AJ.	Appl Environ Microbiol	10.1128/aem.00165-23	2023
	Basidiomycota species in Drosophila gut are associated with host fat metabolism.	Bozkurt B, Terlemez G, Sezgin E.	Sci Rep	10.1038/s41598-023-41027-2	2023
Pathogenicity	Drosophila Gut Immune Pathway Suppresses Host Development-Promoting Effects of Acetic Acid Bacteria.	Lee J, Song X, Hyun B, Jeon CO, Hyun S.	Mol Cells	10.14348/molcells.2023.0141	2023
Genetics	Metagenomics and Metagenome-Assembled Genomes: Analysis of Cupei from Sichuan Baoning Vinegar, One of the Four Traditional Renowned Vinegars in China.	Wu J, Zhao N, Li Q, Zhao K, Tu M, Li J, Hu K, Chen S, Liu S, Liu A.	Foods	10.3390/foods14030398	2025
	Role of gut commensal bacteria in juvenile developmental growth of the host: insights from Drosophila studies.	Yun HM, Hyun S.	Anim Cells Syst (Seoul)	10.1080/19768354.2023.2282726	2023
	Ratio between Lactobacillus plantarum and Acetobacter pomorum on the surface of Drosophila melanogaster adult flies depends on cuticle melanisation.	Mokeev V, Flaven-Pouchon J, Wang Y, Gehring N, Moussian B.	BMC Res Notes	10.1186/s13104-021-05766-7	2021
	Mitochondrial sirtuin 4 shapes the intestinal microbiota of Drosophila by controlling lysozyme expression.	Knop M, Treitz C, Bettendorf S, Bossen J, von Frieling J, Doms S, Saboukh A, Bruchhaus I, Kuhnlein RP, Baines JF, Tholey A, Roeder T.	Anim Microbiome	10.1186/s42523-025-00431-x	2025
Pathogenicity	EGCG ameliorates neuronal and behavioral defects by remodeling gut microbiota and TotM expression in Drosophila models of Parkinson's disease.	Xu Y, Xie M, Xue J, Xiang L, Li Y, Xiao J, Xiao G, Wang HL.	FASEB J	10.1096/fj.201903125rr	2020
	Antimicrobial Resistance of Acetobacter and Komagataeibacter Species Originating from Vinegars.	Cepec E, Trcek J.	Int J Environ Res Public Health	10.3390/ijerph19010463	2022
	Deciphering the Microbiota of Edible Insects Sold by Street Vendors in Thailand Using Metataxonomic Analysis.	Rampanti G, Cardinali F, Ferrocino I, Milanovic V, Garofalo C, Osimani A, Aquilanti L.	Insects	10.3390/insects16020122	2025
Phylogeny	Longitudinal dynamics of intestinal bacteria in the life cycle and their effects on growth and development of potato tuber moth.	Fu Q, Wang W, Chen B, Hu Y, Ma R, Zhu E, Jin S, Cai H, Xiao G, Du G.	Front Microbiol	10.3389/fmicb.2025.1542589	2025
	Effects of the symbiotic bacteria, Caballeronia insecticola, on the life history parameters of Riptortus pedestris (Hemiptera: Alydidae) and their implications for the host population growth.	Kho JW, Jung M, Lee DH.	J Insect Sci	10.1093/jisesa/ieae100	2024
	Microbiota-mediated competition between Drosophila species.	Rombaut A, Gallet R, Qitout K, Samy M, Guilhot R, Ghirardini P, Lazzaro BP, Becher PG, Xuereb A, Gibert P, Fellous S.	Microbiome	10.1186/s40168-023-01617-8	2023
Phylogeny	Environmental Changes Driving Shifts in the Structure and Functional Properties of the Symbiotic Microbiota of Daphnia.	You M, Yang W.	Microorganisms	10.3390/microorganisms12122492	2024
	Complete Genome Sequence of Acetobacter pomorum Oregon-R-modENCODE Strain BDGP5, an Acetic Acid Bacterium Found in the Drosophila melanogaster Gut.	Wan KH, Yu C, Park S, Hammonds AS, Booth BW, Celniker SE.	Genome Announc	10.1128/genomea.01333-17	2017
Phylogeny	Diversity analyses of bacterial symbionts in four Sclerodermus (Hymenoptera: Bethylidae) parasitic wasps, the dominant biological control agents of wood-boring beetles in China.	Kang K, Wang L, Gong J, Tang Y, Wei K.	Front Cell Infect Microbiol	10.3389/fcimb.2024.1439476	2024
	Microbiome drives age-dependent shifts in brain transcriptomic programs at the single-cell level in Drosophila	Zhao D, Shiga R, Song Z, Shu R, Loo L, Wong A.	NPJ Biofilms Microbiomes		2025
	Microbes control Drosophila germline stem cell increase and egg maturation through hormonal pathways.	Suyama R, Cetraro N, Yew JY, Kai T.	Commun Biol	10.1038/s42003-023-05660-x	2023
	Gut fungal diversity across different life stages of the onion fly Delia antiqua.	Cao X, Li M, Wu X, Fan S, Lin L, Xu L, Zhang X, Zhou F.	Microb Ecol	10.1007/s00248-024-02431-x	2024
	Environment and diet shape the geography-specific Drosophila melanogaster microbiota composition.	Gale JT, Kreutz R, Gottfredson Morgan SJ, Davis EK, Hough C, Cisneros Cancino WA, Burnside B, Barney R, Hunsaker R, Tanner Hoyt A, Cluff A, Nosker M, Sefcik C, Beales E, Beltz JK, Frandsen PB, Schmidt P, Chaston JM.	Appl Environ Microbiol	10.1128/aem.00883-25	2025
	Flagellar Genes Are Associated with the Colonization Persistence Phenotype of the Drosophila melanogaster Microbiota.	Morgan SJ, Chaston JM.	Microbiol Spectr	10.1128/spectrum.04585-22	2023
	Parasite reliance on its host gut microbiota for nutrition and survival.	Zhou S, Lu Y, Chen J, Pan Z, Pang L, Wang Y, Zhang Q, Strand MR, Chen XX, Huang J.	ISME J	10.1038/s41396-022-01301-z	2022
Phylogeny	Characterization of Acetobacter pomorum KJY8 isolated from Korean traditional vinegar.	Baek CH, Park EH, Baek SY, Jeong ST, Kim MD, Kwon JH, Jeong YJ, Yeo SH.	J Microbiol Biotechnol	10.4014/jmb.1408.08046	2014
	Recurrent Phases of Strict Protein Limitation Inhibit Tumor Growth and Restore Lifespan in A Drosophila Intestinal Cancer Model.	Pfefferkorn RM, Mortzfeld BM, Fink C, Frieling JV, Bossen J, Esser D, Kaleta C, Rosenstiel P, Heine H, Roeder T.	Aging Dis	10.14336/ad.2023.0517	2024
	Multi-omics characterization of the microbial populations and chemical space composition of a water kefir fermentation.	Arrieta-Echeverri MC, Fernandez GJ, Duarte-Riveros A, Correa-Alvarez J, Bardales JA, Villanueva-Mejia DF, Sierra-Zapata L.	Front Mol Biosci	10.3389/fmolb.2023.1223863	2023
	An altered microbiome in a Parkinson's disease model Drosophila melanogaster has a negative effect on development.	Parker-Character J, Hager DR, Call TB, Pickup ZS, Turnbull SA, Marshman EM, Korch SB, Chaston JM, Call GB.	Sci Rep	10.1038/s41598-021-02624-1	2021
	Impact of intraspecific variation in insect microbiomes on host phenotype and evolution.	Lange C, Boyer S, Bezemer TM, Lefort MC, Dhami MK, Biggs E, Groenteman R, Fowler SV, Paynter Q, Verdecia Mogena AM, Kaltenpoth M.	ISME J	10.1038/s41396-023-01500-2	2023
Pathogenicity	A bacteria-regulated gut peptide determines host dependence on specific bacteria to support host juvenile development and survival.	Lee J, Yun HM, Han G, Lee GJ, Jeon CO, Hyun S.	BMC Biol	10.1186/s12915-022-01458-1	2022
Genetics	Intestinal commensal bacteria promote Bactrocera dorsalis larval development through the vitamin B6 synthesis pathway.	Gu J, Yao Z, Lemaitre B, Cai Z, Zhang H, Li X.	Microbiome	10.1186/s40168-024-01931-9	2024
Phylogeny	Microbiota Influences Fitness and Timing of Reproduction in the Fruit Fly Drosophila melanogaster.	Matthews MK, Malcolm J, Chaston JM.	Microbiol Spectr	10.1128/spectrum.00034-21	2021
	Recombinant bacteriophage LysKB317 endolysin mitigates Lactobacillus infection of corn mash fermentations.	Lu SY, Bischoff KM, Rich JO, Liu S, Skory CD.	Biotechnol Biofuels	10.1186/s13068-020-01795-9	2020
	Direct and trans-generational effects of male and female gut microbiota in Drosophila melanogaster.	Morimoto J, Simpson SJ, Ponton F.	Biol Lett	10.1098/rsbl.2016.0966	2017
	Intestinal GCN2 controls Drosophila systemic growth in response to Lactiplantibacillus plantarum symbiotic cues encoded by r/tRNA operons.	Grenier T, Consuegra J, Ferrarini MG, Akherraz H, Bai L, Dusabyinema Y, Rahioui I, Da Silva P, Gillet B, Hughes S, Ramos CI, Matos RC, Leulier F.	Elife	10.7554/elife.76584	2023
	Metabolic cross-feeding in imbalanced diets allows gut microbes to improve reproduction and alter host behaviour.	Henriques SF, Dhakan DB, Serra L, Francisco AP, Carvalho-Santos Z, Baltazar C, Elias AP, Anjos M, Zhang T, Maddocks ODK, Ribeiro C.	Nat Commun	10.1038/s41467-020-18049-9	2020
Metabolism	Drosophila Antimicrobial Peptides and Lysozymes Regulate Gut Microbiota Composition and Abundance.	Marra A, Hanson MA, Kondo S, Erkosar B, Lemaitre B.	mBio	10.1128/mbio.00824-21	2021
	Age mosaic of gut epithelial cells prevents aging.	Qin P, Wang Q, Wu Y, You Q, Li M, Guo Z.	Nat Commun	10.1038/s41467-025-62043-y	2025
	Predicted Metabolic Function of the Gut Microbiota of Drosophila melanogaster.	Ankrah NYD, Barker BE, Song J, Wu C, McMullen JG, Douglas AE.	mSystems	10.1128/msystems.01369-20	2021
	Metagenomic analysis of the honey bee queen microbiome reveals low bacterial diversity and Caudoviricetes phages.	Caesar L, Rice DW, McAfee A, Underwood R, Ganote C, Tarpy DR, Foster LJ, Newton ILG.	mSystems	10.1128/msystems.01182-23	2024
Pathogenicity	A gut commensal bacterium promotes black soldier fly larval growth and development partly via modulation of intestinal protein metabolism.	Luo X, Fang G, Chen K, Song Y, Lu T, Tomberlin JK, Zhan S, Huang Y.	mBio	10.1128/mbio.01174-23	2023
	Drosophila as a model for homeostatic, antibacterial, and antiviral mechanisms in the gut.	Liu X, Hodgson JJ, Buchon N.	PLoS Pathog	10.1371/journal.ppat.1006277	2017
Metabolism	Drosophila microbiome modulates host developmental and metabolic homeostasis via insulin signaling.	Shin SC, Kim SH, You H, Kim B, Kim AC, Lee KA, Yoon JH, Ryu JH, Lee WJ.	Science	10.1126/science.1212782	2011
	Rickettsia symbionts spread via mixed mode transmission, increasing female fecundity and sex ratio shift by host hormone modulating.	Liu BQ, Bao XY, Yan JY, Zhang D, Sun X, Li CQ, Chen ZB, Luan JB.	Proc Natl Acad Sci U S A	10.1073/pnas.2406788121	2024
	Integrated analysis of miRNA profiles and gut bacterial changes in Altica viridicyanea following antibiotic treatment.	Ren Y, Wang Y, Chen J, Fu S, Bu W, Xue H.	Ecol Evol	10.1002/ece3.10660	2023
	Bacterial Metabolism and Transport Genes Are Associated with the Preference of Drosophila melanogaster for Dietary Yeast.	Call TB, Davis EK, Bean JD, Lemmon SG, Chaston JM.	Appl Environ Microbiol	10.1128/aem.00720-22	2022
	The Role of Microbiota in Drosophila melanogaster Aging.	Arias-Rojas A, Iatsenko I.	Front Aging	10.3389/fragi.2022.909509	2022
	Microbiome-emitted scents activate olfactory neuron-independent airway-gut-brain axis to promote host growth in Drosophila.	Lee JW, Lee KA, Jang IH, Nam K, Kim SH, Kyung M, Cho KC, Lee JH, You H, Kim EK, Koh YH, Lee H, Park J, Hwang SY, Chung YW, Ryu CM, Kwon Y, Roh SH, Ryu JH, Lee WJ.	Nat Commun	10.1038/s41467-025-57484-4	2025
Phylogeny	Assessment of bacterial diversity in selected Philippine fermented food products through PCR-DGGE.	Dalmacio LM, Angeles AK, Larcia LL, Balolong MP, Estacio RC.	Benef Microbes	10.3920/bm2011.0017	2011
Metabolism	The associations of gut microbiota, endocrine system and bone metabolism.	Tu Y, Kuang X, Zhang L, Xu X.	Front Microbiol	10.3389/fmicb.2023.1124945	2023
	Physiological responses of insects to microbial fermentation products: Insights from the interactions between Drosophila and acetic acid.	Kim G, Huang JH, McMullen JG, Newell PD, Douglas AE.	J Insect Physiol	10.1016/j.jinsphys.2017.05.005	2018
	Increased sugar valuation contributes to the evolutionary shift in egg-laying behavior of the fruit pest Drosophila suzukii.	Cavey M, Charroux B, Travaillard S, Maniere G, Berthelot-Grosjean M, Quitard S, Minervino C, Detailleur B, Grosjean Y, Prud'homme B.	PLoS Biol	10.1371/journal.pbio.3002432	2023
	Interaction of acetic acid bacteria and lactic acid bacteria in multispecies solid-state fermentation of traditional Chinese cereal vinegar.	Xia M, Zhang X, Xiao Y, Sheng Q, Tu L, Chen F, Yan Y, Zheng Y, Wang M.	Front Microbiol	10.3389/fmicb.2022.964855	2022
Pathogenicity	Meta-analysis of Diets Used in Drosophila Microbiome Research and Introduction of the Drosophila Dietary Composition Calculator (DDCC).	Lesperance DNA, Broderick NA.	G3 (Bethesda)	10.1534/g3.120.401235	2020
	Pathobiont and symbiont contribute to microbiota homeostasis through Malpighian tubules-gut countercurrent flow in Bactrocera dorsalis.	Liu Y, Luo R, Bai S, Lemaitre B, Zhang H, Li X.	ISME J	10.1093/ismejo/wrae221	2024
Metabolism	Commensal bacteria and essential amino acids control food choice behavior and reproduction.	Leitao-Goncalves R, Carvalho-Santos Z, Francisco AP, Fioreze GT, Anjos M, Baltazar C, Elias AP, Itskov PM, Piper MDW, Ribeiro C.	PLoS Biol	10.1371/journal.pbio.2000862	2017
	The importance of environmental microbes for Drosophila melanogaster during seasonal macronutrient variability.	Davies LR, Loeschcke V, Schou MF, Schramm A, Kristensen TN.	Sci Rep	10.1038/s41598-021-98119-0	2021
Pathogenicity	The Drosophila melanogaster Gut Microbiota Provisions Thiamine to Its Host.	Sannino DR, Dobson AJ, Edwards K, Angert ER, Buchon N.	mBio	10.1128/mbio.00155-18	2018
	A novel immune modulator IM33 mediates a glia-gut-neuronal axis that controls lifespan.	Xu W, Rustenhoven J, Nelson CA, Dykstra T, Ferreiro A, Papadopoulos Z, Burnham CD, Dantas G, Fremont DH, Kipnis J.	Neuron	10.1016/j.neuron.2023.07.010	2023
	Horizontal gene transfer-mediated bacterial strain variation affects host fitness in Drosophila.	Wang Y, Baumdicker F, Schweiger P, Kuenzel S, Staubach F.	BMC Biol	10.1186/s12915-021-01124-y	2021
	Role of Rab5 early endosomes in regulating Drosophila gut antibacterial response.	Joshi M, Viallat-Lieutaud A, Royet J.	iScience	10.1016/j.isci.2023.107335	2023
	Mosquito sex and mycobiota contribute to fructose metabolism in the Asian tiger mosquito Aedes albopictus.	Guegan M, Martin E, Tran Van V, Fel B, Hay AE, Simon L, Butin N, Bellvert F, Haichar FEZ, Valiente Moro C.	Microbiome	10.1186/s40168-022-01325-9	2022
	Comprehensive deciphering prophages in genus Acetobacter on the ecology, genomic features, toxin-antitoxin system, and linkage with CRISPR-Cas system.	Qian C, Ma J, Liang J, Zhang L, Liang X.	Front Microbiol	10.3389/fmicb.2022.951030	2022
Metabolism	Application of molecular methods for routine identification of acetic acid bacteria.	Gonzalez A, Guillamon JM, Mas A, Poblet M.	Int J Food Microbiol	10.1016/j.ijfoodmicro.2005.10.025	2006
	The Host as the Driver of the Microbiota in the Gut and External Environment of Drosophila melanogaster.	Wong AC, Luo Y, Jing X, Franzenburg S, Bost A, Douglas AE.	Appl Environ Microbiol	10.1128/aem.01442-15	2015
	Microbiota-Dependent Priming of Antiviral Intestinal Immunity in Drosophila.	Sansone CL, Cohen J, Yasunaga A, Xu J, Osborn G, Subramanian H, Gold B, Buchon N, Cherry S.	Cell Host Microbe	10.1016/j.chom.2015.10.010	2015
Metabolism	Host-Microbe-Pathogen Interactions: A Review of Vibrio cholerae Pathogenesis in Drosophila.	Davoodi S, Foley E.	Front Immunol	10.3389/fimmu.2019.03128	2019
Enzymology	Host Genetic Control of the Microbiota Mediates the Drosophila Nutritional Phenotype.	Chaston JM, Dobson AJ, Newell PD, Douglas AE.	Appl Environ Microbiol	10.1128/aem.03301-15	2016
Genetics	Identification of a novel interspecific hybrid yeast from a metagenomic spontaneously inoculated beer sample using Hi-C.	Smukowski Heil C, Burton JN, Liachko I, Friedrich A, Hanson NA, Morris CL, Schacherer J, Shendure J, Thomas JH, Dunham MJ.	Yeast	10.1002/yea.3280	2018
Phylogeny	The impact of Rhodiola rosea on the gut microbial community of Drosophila melanogaster.	Labachyan KE, Kiani D, Sevrioukov EA, Schriner SE, Jafari M.	Gut Pathog	10.1186/s13099-018-0239-8	2018
	Bacillus thuringiensis Bioinsecticides Induce Developmental Defects in Non-Target Drosophila melanogaster Larvae.	Nawrot-Esposito MP, Babin A, Pasco M, Poirie M, Gatti JL, Gallet A.	Insects	10.3390/insects11100697	2020
	Beneficial commensal bacteria promote Drosophila growth by downregulating the expression of peptidoglycan recognition proteins.	Gallo M, Vento JM, Joncour P, Quagliariello A, Maritan E, Silva-Soares NF, Battistolli M, Beisel CL, Martino ME, Martino ME.	iScience	10.1016/j.isci.2022.104357	2022
Metabolism	Is the regulation of insulin signaling multi-organismal?	Douglas AE.	Sci Signal	10.1126/scisignal.2002669	2011
Genetics	Comparative genomics of Klebsiella michiganensis BD177 and related members of Klebsiella sp. reveal the symbiotic relationship with Bactrocera dorsalis.	Cai Z, Guo Q, Yao Z, Zheng W, Xie J, Bai S, Zhang H.	BMC Genet	10.1186/s12863-020-00945-0	2020
	Scavenger receptor B2, a type III membrane pattern recognition receptor, senses LPS and activates the IMD pathway in crustaceans.	Shi XZ, Yang MC, Kang XL, Li YX, Hong PP, Zhao XF, Vasta GR, Wang JX.	Proc Natl Acad Sci U S A	10.1073/pnas.2216574120	2023
Metabolism	Bacterial Methionine Metabolism Genes Influence Drosophila melanogaster Starvation Resistance.	Judd AM, Matthews MK, Hughes R, Veloz M, Sexton CE, Chaston JM.	Appl Environ Microbiol	10.1128/aem.00662-18	2018
	Prevalence of an Insect-Associated Genomic Region in Environmentally Acquired Burkholderiaceae Symbionts.	Stillson PT, Baltrus DA, Ravenscraft A.	Appl Environ Microbiol	10.1128/aem.02502-21	2022
	Metabolic Cooperation among Commensal Bacteria Supports Drosophila Juvenile Growth under Nutritional Stress.	Consuegra J, Grenier T, Akherraz H, Rahioui I, Gervais H, da Silva P, Leulier F.	iScience	10.1016/j.isci.2020.101232	2020
Metabolism	Save your gut save your age: The role of the microbiome in stem cell ageing.	Tan Y, Wei Z, Chen J, An J, Li M, Zhou L, Men Y, Zhao S.	J Cell Mol Med	10.1111/jcmm.14373	2019
	Gut-derived peptidoglycan remotely inhibits bacteria dependent activation of SREBP by Drosophila adipocytes.	Charroux B, Royet J.	PLoS Genet	10.1371/journal.pgen.1010098	2022
	Drosophila-associated bacteria differentially shape the nutritional requirements of their host during juvenile growth.	Consuegra J, Grenier T, Baa-Puyoulet P, Rahioui I, Akherraz H, Gervais H, Parisot N, da Silva P, Charles H, Calevro F, Leulier F.	PLoS Biol	10.1371/journal.pbio.3000681	2020
Genetics	Genomic Comparison of Insect Gut Symbionts from Divergent Burkholderia Subclades.	Takeshita K, Kikuchi Y.	Genes (Basel)	10.3390/genes11070744	2020
	Inhibition of oxidative stress in cholinergic projection neurons fully rescues aging-associated olfactory circuit degeneration in Drosophila.	Hussain A, Pooryasin A, Zhang M, Loschek LF, La Fortezza M, Friedrich AB, Blais CM, Ucpunar HK, Yepez VA, Lehmann M, Gompel N, Gagneur J, Sigrist SJ, Grunwald Kadow IC.	Elife	10.7554/elife.32018	2018
	High Diversity and Functional Complementation of Alimentary Canal Microbiota Ensure Small Brown Planthopper to Adapt Different Biogeographic Environments.	Liu W, Zhang X, Wu N, Ren Y, Wang X.	Front Microbiol	10.3389/fmicb.2019.02953	2019
	Microbiome of the Queensland Fruit Fly through Metamorphosis.	Majumder R, Sutcliffe B, Taylor PW, Taylor PW, Chapman TA.	Microorganisms	10.3390/microorganisms8060795	2020
	Low-diversity bacterial community in the gut of the fruitfly Drosophila melanogaster.	Wong CN, Ng P, Douglas AE.	Environ Microbiol	10.1111/j.1462-2920.2011.02511.x	2011
	Microbes affect gut epithelial cell composition through immune-dependent regulation of intestinal stem cell differentiation.	Liu X, Nagy P, Bonfini A, Houtz P, Bing XL, Yang X, Buchon N.	Cell Rep	10.1016/j.celrep.2022.110572	2022
Biotechnology	The presence of Acetobacter sp. in ensiled forage crops and ensiled industrial byproducts.	Oude Elferinck SJ, Driehuis F, Becker PM, Gottschal JC, Faber F, Spoelstra SF.	Meded Rijksuniv Gent Fak Landbouwkd Toegep Biol Wet		2001
Pathogenicity	The Effect of Inulin on Lifespan, Related Gene Expression and Gut Microbiota in InR^p5545/TM3 Mutant Drosophila melanogaster: A Preliminary Study.	Dong Y, Sun H, Yang W, Ma S, Du B, Xu H.	Nutrients	10.3390/nu11030636	2019
Metabolism	Gut Microbiota and IGF-1.	Yan J, Charles JF.	Calcif Tissue Int	10.1007/s00223-018-0395-3	2018
Phylogeny	Bacteriophage: A Useful Tool for Studying Gut Bacteria Function of Housefly Larvae, Musca domestica.	Zhang X, Wang S, Li T, Zhang Q, Zhang R, Zhang Z.	Microbiol Spectr	10.1128/spectrum.00599-21	2021
	Rearing the Fruit Fly Drosophila melanogaster Under Axenic and Gnotobiotic Conditions.	Koyle ML, Veloz M, Judd AM, Wong AC, Newell PD, Douglas AE, Chaston JM.	J Vis Exp	10.3791/54219	2016
Pathogenicity	Diet-Microbiota Interactions Alter Mosquito Development.	Martinson VG, Strand MR.	Front Microbiol	10.3389/fmicb.2021.650743	2021
Genetics	Drosophila melanogaster as an alternative model organism in nutrigenomics.	Baenas N, Wagner AE.	Genes Nutr	10.1186/s12263-019-0641-y	2019
	Next-Generation Sequencing reveals relationship between the larval microbiome and food substrate in the polyphagous Queensland fruit fly.	Majumder R, Sutcliffe B, Taylor PW, Chapman TA.	Sci Rep	10.1038/s41598-019-50602-5	2019
	Selective Phosphorylation of Akt/Protein-Kinase B Isoforms in Response to Dietary Cues.	Trautenberg LC, Prince E, Maas C, Beier N, Honold F, Grzybek M, Brankatschk M.	Front Cell Dev Biol	10.3389/fcell.2019.00206	2019
	Sexual identity of enterocytes regulates autophagy to determine intestinal health, lifespan and responses to rapamycin.	Regan JC, Lu YX, Urena E, Meilenbrock RL, Catterson JH, Kissler D, Frohlich J, Funk E, Partridge L.	Nat Aging	10.1038/s43587-022-00308-7	2022
	Comparison of Cultivable Acetic Acid Bacterial Microbiota in Organic and Conventional Apple Cider Vinegar.	Stornik A, Skok B, Trcek J.	Food Technol Biotechnol	10.17113/ftb.54.01.16.4082	2016
Metabolism	Modeling Drosophila gut microbe interactions reveals metabolic interconnectivity.	Schonborn JW, Stewart FA, Enriquez KM, Akhtar I, Droste A, Waschina S, Beller M.	iScience	10.1016/j.isci.2021.103216	2021
Metabolism	Quantitative gingival crevicular fluid proteome in health and periodontal disease using stable isotope chemistries and mass spectrometry.	Carneiro LG, Nouh H, Salih E.	J Clin Periodontol	10.1111/jcpe.12262	2014
	Strong responses of Drosophila melanogaster microbiota to developmental temperature.	Moghadam NN, Thorshauge PM, Kristensen TN, de Jonge N, Bahrndorff S, Kjeldal H, Nielsen JL.	Fly (Austin)	10.1080/19336934.2017.1394558	2018
	The Role of the Microbiota in Regeneration-Associated Processes.	Diaz-Diaz LM, Rodriguez-Villafane A, Garcia-Arraras JE.	Front Cell Dev Biol	10.3389/fcell.2021.768783	2021
Genetics	Gut-associated microbes of Drosophila melanogaster.	Broderick NA, Lemaitre B.	Gut Microbes	10.4161/gmic.19896	2012
Pathogenicity	Tephritid-microbial interactions to enhance fruit fly performance in sterile insect technique programs.	Deutscher AT, Chapman TA, Shuttleworth LA, Riegler M, Reynolds OL.	BMC Microbiol	10.1186/s12866-019-1650-0	2019
	An Ancestral Balanced Inversion Polymorphism Confers Global Adaptation.	Kapun M, Mitchell ED, Kawecki TJ, Schmidt P, Flatt T.	Mol Biol Evol	10.1093/molbev/msad118	2023
	Lactobacillus plantarum favors the early emergence of fit and fertile adult Drosophila upon chronic undernutrition.	Tefit MA, Leulier F.	J Exp Biol	10.1242/jeb.151522	2017
	Microbial Quantity Impacts Drosophila Nutrition, Development, and Lifespan.	Keebaugh ES, Yamada R, Obadia B, Ludington WB, Ja WW.	iScience	10.1016/j.isci.2018.06.004	2018
Metabolism	Molecular mechanism and functional significance of acid generation in the Drosophila midgut.	Overend G, Luo Y, Henderson L, Douglas AE, Davies SA, Dow JA.	Sci Rep	10.1038/srep27242	2016
Enzymology	Evidence of Adaptive Evolution in Wolbachia-Regulated Gene DNMT2 and Its Role in the Dipteran Immune Response and Pathogen Blocking.	Bhattacharya T, Rice DW, Crawford JM, Hardy RW, Newton ILG.	Viruses	10.3390/v13081464	2021
	The Drosophila microbiome has a limited influence on sleep, activity, and courtship behaviors.	Selkrig J, Mohammad F, Ng SH, Chua JY, Tumkaya T, Ho J, Chiang YN, Rieger D, Pettersson S, Helfrich-Forster C, Yew JY, Claridge-Chang A.	Sci Rep	10.1038/s41598-018-28764-5	2018
Genetics	Temporal Shotgun Metagenomics Revealed the Potential Metabolic Capabilities of Specific Microorganisms During Lambic Beer Production.	De Roos J, Verce M, Weckx S, De Vuyst L.	Front Microbiol	10.3389/fmicb.2020.01692	2020
	The Drosophila transcriptional network is structured by microbiota.	Dobson AJ, Chaston JM, Douglas AE.	BMC Genomics	10.1186/s12864-016-3307-9	2016
Genetics	The Genomic Architecture of Adaptation to Larval Malnutrition Points to a Trade-off with Adult Starvation Resistance in Drosophila.	Kawecki TJ, Erkosar B, Dupuis C, Hollis B, Stillwell RC, Kapun M.	Mol Biol Evol	10.1093/molbev/msab061	2021
Phylogeny	Phylogenetic characterization of two novel commensal bacteria involved with innate immune homeostasis in Drosophila melanogaster.	Roh SW, Nam YD, Chang HW, Kim KH, Kim MS, Ryu JH, Kim SH, Lee WJ, Bae JW.	Appl Environ Microbiol	10.1128/aem.00301-08	2008
	Adaptation to Chronic Nutritional Stress Leads to Reduced Dependence on Microbiota in Drosophila melanogaster.	Erkosar B, Kolly S, van der Meer JR, Kawecki TJ.	mBio	10.1128/mbio.01496-17	2017
Metabolism	Interspecies interactions determine the impact of the gut microbiota on nutrient allocation in Drosophila melanogaster.	Newell PD, Douglas AE.	Appl Environ Microbiol	10.1128/aem.02742-13	2014
Phylogeny	A high-fat diet induces a microbiota-dependent increase in stem cell activity in the Drosophila intestine.	von Frieling J, Faisal MN, Sporn F, Pfefferkorn R, Nolte SS, Sommer F, Rosenstiel P, Roeder T.	PLoS Genet	10.1371/journal.pgen.1008789	2020
	The effect of gut microbiota elimination in Drosophila melanogaster: A how-to guide for host-microbiota studies.	Heys C, Lize A, Blow F, White L, Darby A, Lewis ZJ.	Ecol Evol	10.1002/ece3.3991	2018
	Drosophila Aversive Behavior toward Erwinia carotovora carotovora Is Mediated by Bitter Neurons and Leukokinin.	Charroux B, Daian F, Royet J.	iScience	10.1016/j.isci.2020.101152	2020
	Metabolic Basis for Mutualism between Gut Bacteria and Its Impact on the Drosophila melanogaster Host.	Sommer AJ, Newell PD.	Appl Environ Microbiol	10.1128/aem.01882-18	2019
Pathogenicity	Early-life exposure to low-dose oxidants can increase longevity via microbiome remodelling in Drosophila.	Obata F, Fons CO, Gould AP.	Nat Commun	10.1038/s41467-018-03070-w	2018
Genetics	A Metabologenomic Approach Reveals Changes in the Intestinal Environment of Mice Fed on American Diet.	Ishii C, Nakanishi Y, Murakami S, Nozu R, Ueno M, Hioki K, Aw W, Hirayama A, Soga T, Ito M, Tomita M, Fukuda S.	Int J Mol Sci	10.3390/ijms19124079	2018
	Microbiota Perturbation or Elimination Can Inhibit Normal Development and Elicit a Starvation-Like Response in an Omnivorous Model Invertebrate.	Vera-Ponce de Leon A, Jahnes BC, Otero-Bravo A, Sabree ZL.	mSystems	10.1128/msystems.00802-21	2021
Metabolism	C-type lectin-mediated microbial homeostasis is critical for Helicoverpa armigera larval growth and development.	Wang W, Wang G, Zhuo X, Liu Y, Tang L, Liu X, Wang J.	PLoS Pathog	10.1371/journal.ppat.1008901	2020
Pathogenicity	Comparative evaluation of the genomes of three common Drosophila-associated bacteria.	Petkau K, Fast D, Duggal A, Foley E.	Biol Open	10.1242/bio.017673	2016
	Pathogenic bacteria enhance dispersal through alteration of Drosophila social communication.	Keesey IW, Koerte S, Khallaf MA, Retzke T, Guillou A, Grosse-Wilde E, Buchon N, Knaden M, Hansson BS.	Nat Commun	10.1038/s41467-017-00334-9	2017
	Host genetic determinants of microbiota-dependent nutrition revealed by genome-wide analysis of Drosophila melanogaster.	Dobson AJ, Chaston JM, Newell PD, Donahue L, Hermann SL, Sannino DR, Westmiller S, Wong AC, Clark AG, Lazzaro BP, Douglas AE.	Nat Commun	10.1038/ncomms7312	2015
Metabolism	Elucidating and Regulating the Acetoin Production Role of Microbial Functional Groups in Multispecies Acetic Acid Fermentation.	Lu ZM, Liu N, Wang LJ, Wu LH, Gong JS, Yu YJ, Li GQ, Shi JS, Xu ZH.	Appl Environ Microbiol	10.1128/aem.01331-16	2016
	Effect of Quorum Sensing by Staphylococcus epidermidis on the Attraction Response of Female Adult Yellow Fever Mosquitoes, Aedes aegypti aegypti (Linnaeus) (Diptera: Culicidae), to a Blood-Feeding Source.	Zhang X, Crippen TL, Coates CJ, Wood TK, Tomberlin JK.	PLoS One	10.1371/journal.pone.0143950	2015
Metabolism	The Intestine of Drosophila melanogaster: An Emerging Versatile Model System to Study Intestinal Epithelial Homeostasis and Host-Microbial Interactions in Humans.	Capo F, Wilson A, Di Cara F.	Microorganisms	10.3390/microorganisms7090336	2019
Phylogeny	Influence of Lab Adapted Natural Diet and Microbiota on Life History and Metabolic Phenotype of Drosophila melanogaster.	Bombin A, Cunneely O, Eickman K, Bombin S, Ruesy A, Su M, Myers A, Cowan R, Reed L.	Microorganisms	10.3390/microorganisms8121972	2020
Pathogenicity	Olfactory detection of a bacterial short-chain fatty acid acts as an orexigenic signal in Drosophila melanogaster larvae.	Depetris-Chauvin A, Galagovsky D, Chevalier C, Maniere G, Grosjean Y.	Sci Rep	10.1038/s41598-017-14589-1	2017
Genetics	Complete genome and gene expression analyses of Asaia bogorensis reveal unique responses to culture with mammalian cells as a potential opportunistic human pathogen.	Kawai M, Higashiura N, Hayasaki K, Okamoto N, Takami A, Hirakawa H, Matsushita K, Azuma Y.	DNA Res	10.1093/dnares/dsv018	2015
Genetics	Complete genome sequence and comparative analysis of Acetobacter pasteurianus 386B, a strain well-adapted to the cocoa bean fermentation ecosystem.	Illeghems K, De Vuyst L, Weckx S.	BMC Genomics	10.1186/1471-2164-14-526	2013
Metabolism	The Drosophila Immune Deficiency Pathway Modulates Enteroendocrine Function and Host Metabolism.	Kamareddine L, Robins WP, Berkey CD, Mekalanos JJ, Watnick PI.	Cell Metab	10.1016/j.cmet.2018.05.026	2018
	Spatiotemporally Heterogeneous Population Dynamics of Gut Bacteria Inferred from Fecal Time Series Data.	Inamine H, Ellner SP, Newell PD, Luo Y, Buchon N, Douglas AE.	mBio	10.1128/mbio.01453-17	2018
	Impact of the Chromatin Remodeling Factor CHD1 on Gut Microbiome Composition of Drosophila melanogaster.	Sebald J, Willi M, Schoberleitner I, Krogsdam A, Orth-Holler D, Trajanoski Z, Lusser A.	PLoS One	10.1371/journal.pone.0153476	2016
	Acetic Acid Bacteria in the Food Industry: Systematics, Characteristics and Applications.	Gomes RJ, Borges MF, Rosa MF, Castro-Gomez RJH, Spinosa WA.	Food Technol Biotechnol	10.17113/ftb.56.02.18.5593	2018
Metabolism	The impact of genome variation and diet on the metabolic phenotype and microbiome composition of Drosophila melanogaster.	Jehrke L, Stewart FA, Droste A, Beller M.	Sci Rep	10.1038/s41598-018-24542-5	2018
	The inconstant gut microbiota of Drosophila species revealed by 16S rRNA gene analysis.	Wong AC, Chaston JM, Douglas AE.	ISME J	10.1038/ismej.2013.86	2013
	Structure-function analysis of Lactiplantibacillus plantarum DltE reveals D-alanylated lipoteichoic acids as direct cues supporting Drosophila juvenile growth.	Nikolopoulos N, Matos RC, Ravaud S, Courtin P, Akherraz H, Palussiere S, Gueguen-Chaignon V, Salomon-Mallet M, Guillot A, Guerardel Y, Chapot-Chartier MP, Grangeasse C, Leulier F.	Elife	10.7554/elife.84669	2023
Metabolism	A post-ingestive amino acid sensor promotes food consumption in Drosophila.	Yang Z, Huang R, Fu X, Wang G, Qi W, Mao D, Shi Z, Shen WL, Wang L.	Cell Res	10.1038/s41422-018-0084-9	2018
Genetics	Drosophila Evolution over Space and Time (DEST): A New Population Genomics Resource.	Kapun M, Nunez JCB, Bogaerts-Marquez M, Murga-Moreno J, Paris M, Outten J, Coronado-Zamora M, Tern C, Rota-Stabelli O, Guerreiro MPG, Casillas S, Orengo DJ, Puerma E, Kankare M, Ometto L, Loeschcke V, Onder BS, Abbott JK, Schaeffer SW, Rajpurohit S, Behrman EL, Schou MF, Merritt TJS, Lazzaro BP, Glaser-Schmitt A, Argyridou E, Staubach F, Wang Y, Tauber E, Serga SV, Fabian DK, Dyer KA, Wheat CW, Parsch J, Grath S, Veselinovic MS, Stamenkovic-Radak M, Jelic M, Buendia-Ruiz AJ, Gomez-Julian MJ, Espinosa-Jimenez ML, Gallardo-Jimenez FD, Patenkovic A, Eric K, Tanaskovic M, Ullastres A, Guio L, Merenciano M, Guirao-Rico S, Horvath V, Obbard DJ, Pasyukova E, Alatortsev VE, Vieira CP, Vieira J, Torres JR, Kozeretska I, Maistrenko OM, Montchamp-Moreau C, Mukha DV, Machado HE, Lamb K, Paulo T, Yusuf L, Barbadilla A, Petrov D, Schmidt P, Gonzalez J, Flatt T, Bergland AO.	Mol Biol Evol	10.1093/molbev/msab259	2021
Phylogeny	Mosquitoes rely on their gut microbiota for development.	Coon KL, Vogel KJ, Brown MR, Strand MR.	Mol Ecol	10.1111/mec.12771	2014
Metabolism	D-Alanylation of teichoic acids contributes to Lactobacillus plantarum-mediated Drosophila growth during chronic undernutrition.	Matos RC, Schwarzer M, Gervais H, Courtin P, Joncour P, Gillet B, Ma D, Bulteau AL, Martino ME, Martino ME, Hughes S, Chapot-Chartier MP, Leulier F.	Nat Microbiol	10.1038/s41564-017-0038-x	2017
Metabolism	RNA Interference Directed against the Transglutaminase Gene Triggers Dysbiosis of Gut Microbiota in Drosophila.	Sekihara S, Shibata T, Hyakkendani M, Kawabata SI.	J Biol Chem	10.1074/jbc.m116.761791	2016
	Spotting the differences: probing host/microbiota interactions with a dedicated software tool for the analysis of faecal outputs in Drosophila.	Wayland MT, Defaye A, Rocha J, Jayaram SA, Royet J, Miguel-Aliaga I, Leulier F, Cognigni P.	J Insect Physiol	10.1016/j.jinsphys.2014.05.023	2014
	Comparison of transcript profiles in different life stages of the nematode Globodera pallida under different host potato genotypes.	Palomares-Rius JE, Hedley PE, Cock PJ, Morris JA, Jones JT, Vovlas N, Blok V.	Mol Plant Pathol	10.1111/j.1364-3703.2012.00821.x	2012
Metabolism	Symbiotic lactobacilli stimulate gut epithelial proliferation via Nox-mediated generation of reactive oxygen species.	Jones RM, Luo L, Ardita CS, Richardson AN, Kwon YM, Mercante JW, Alam A, Gates CL, Wu H, Swanson PA, Lambeth JD, Denning PW, Neish AS.	EMBO J	10.1038/emboj.2013.224	2013
Metabolism	Role of DUOX in gut inflammation: lessons from Drosophila model of gut-microbiota interactions.	Kim SH, Lee WJ.	Front Cell Infect Microbiol	10.3389/fcimb.2013.00116	2014
	Internal State Dependent Odor Processing and Perception-The Role of Neuromodulation in the Fly Olfactory System.	Sayin S, Boehm AC, Kobler JM, De Backer JF, Grunwald Kadow IC.	Front Cell Neurosci	10.3389/fncel.2018.00011	2018
Metabolism	Gut microbiota promotes host resistance to low-temperature stress by stimulating its arginine and proline metabolism pathway in adult Bactrocera dorsalis.	Raza MF, Wang Y, Cai Z, Bai S, Yao Z, Awan UA, Zhang Z, Zheng W, Zhang H.	PLoS Pathog	10.1371/journal.ppat.1008441	2020
	Regenerative inflammation: lessons from Drosophila intestinal epithelium in health and disease.	Panayidou S, Apidianakis Y.	Pathogens	10.3390/pathogens2020209	2013
Phylogeny	Species diversity, community dynamics, and metabolite kinetics of the microbiota associated with traditional ecuadorian spontaneous cocoa bean fermentations.	Papalexandratou Z, Falony G, Romanens E, Jimenez JC, Amores F, Daniel HM, De Vuyst L.	Appl Environ Microbiol	10.1128/aem.05523-11	2011
	Deep divergence and rapid evolutionary rates in gut-associated Acetobacteraceae of ants.	Brown BP, Wernegreen JJ.	BMC Microbiol	10.1186/s12866-016-0721-8	2016
Pathogenicity	Near full-length 16S rRNA gene next-generation sequencing revealed Asaia as a common midgut bacterium of wild and domesticated Queensland fruit fly larvae.	Deutscher AT, Burke CM, Darling AE, Riegler M, Reynolds OL, Chapman TA.	Microbiome	10.1186/s40168-018-0463-y	2018
Metabolism	A gut microbial factor modulates locomotor behaviour in Drosophila.	Schretter CE, Vielmetter J, Bartos I, Marka Z, Marka S, Argade S, Mazmanian SK.	Nature	10.1038/s41586-018-0634-9	2018
	Nutrient-Dependent Impact of Microbes on Drosophila suzukii Development.	Bing X, Gerlach J, Loeb G, Buchon N.	mBio	10.1128/mbio.02199-17	2018
Genetics	In vivo function and comparative genomic analyses of the Drosophila gut microbiota identify candidate symbiosis factors.	Newell PD, Chaston JM, Wang Y, Winans NJ, Sannino DR, Wong AC, Dobson AJ, Kagle J, Douglas AE.	Front Microbiol	10.3389/fmicb.2014.00576	2014
	The developmental control of size in insects.	Nijhout HF, Riddiford LM, Mirth C, Shingleton AW, Suzuki Y, Callier V.	Wiley Interdiscip Rev Dev Biol	10.1002/wdev.124	2014
Genetics	Stochastic variation in the initial phase of bacterial infection predicts the probability of survival in D. melanogaster.	Duneau D, Ferdy JB, Revah J, Kondolf H, Ortiz GA, Lazzaro BP, Buchon N.	Elife	10.7554/elife.28298	2017
	The Discovery, Distribution, and Evolution of Viruses Associated with Drosophila melanogaster.	Webster CL, Waldron FM, Robertson S, Crowson D, Ferrari G, Quintana JF, Brouqui JM, Bayne EH, Longdon B, Buck AH, Lazzaro BP, Akorli J, Haddrill PR, Obbard DJ.	PLoS Biol	10.1371/journal.pbio.1002210	2015
	Native microbial colonization of Drosophila melanogaster and its use as a model of Enterococcus faecalis pathogenesis.	Cox CR, Gilmore MS.	Infect Immun	10.1128/iai.01496-06	2007
Phylogeny	Re-examination of the genus Acetobacter, with descriptions of Acetobacter cerevisiae sp. nov. and Acetobacter malorum sp. nov.	Cleenwerck I, Vandemeulebroecke K, Janssens D, Swings J.	Int J Syst Evol Microbiol	10.1099/00207713-52-5-1551	2002
Phylogeny	Description of Acetobacter oboediens sp. nov. and Acetobacter pomorum sp. nov., two new species isolated from industrial vinegar fermentations.	Sokollek SJ, Hertel C, Hammes WP	Int J Syst Bacteriol	10.1099/00207713-48-3-935	1998

References

#4505	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11825
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#23232	Stephan J. Sokollek,Christian Hertel, Walter P. Hammes: Description of Acetobacter oboediens sp. nov. and Acetobacter pomorum sp. nov., two new species isolated from industrial vinegar fermentations. IJSEM 48: 935 - 940 1998 ( DOI 10.1099/00207713-48-3-935 , PubMed 9734049 )
#32837	; Curators of the CIP;
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#121936	Collection of Institut Pasteur ; Curators of the CIP; CIP 105762
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Content

About us

Acetobacter pomorum (DSM 11825, LTH 2458, CIP 105762)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Tolerance

Metabolite utilization

Antibiotic resistance

Metabolite production

Enzymes

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_025995455

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media