Name: Rhodococcus erythropolis DTB
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 10880

Type strain:

Species: Rhodococcus erythropolis

Strain Designation: DTB

Culture col. no.: DSM 44534

Strain history: <- L. Adrian, Techn. Univ. Berlin; DTB

NCBI tax ID(s): 1833 (species)

SI-ID 113668

DSM 44534

Other strains from Rhodococcus erythropolis

Section

Rhodococcus erythropolis DTB is a mesophilic human pathogen that was isolated from river sediment.

human pathogen
mesophilic
16S sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Genus	*Rhodococcus*
	Species	**Rhodococcus erythropolis**
	Full Scientific Name (LPSN)	Rhodococcus erythropolis (Gray and Thornton 1928) Goodfellow and Alderson 1979 (Approved Lists 1980)

	Synonym	"Mycobacterium* erythropolis"*
	Synonym	Rhodococcus qingshengii
	Synonym	Rhodococcus baikonurensis
	Synonym	Rhodococcus jialingiae
	Synonym	Rhodococcus enclensis
	Synonym	Rhodococcus degradans

Information on culture and growth conditions Culture and growth conditions

[Ref.: #11739]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #11739]

Culture medium growth

[Ref.: #11739]

Culture medium link

Medium recipe at MediaDive

[Ref.: #11739]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #11739]			growth	28 °C

[Ref.: #11739]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #11739]	Sample type/isolated from	river sediment
[Ref.: #11739]	Geographic location (country and/or sea, region)	Berlin
[Ref.: #11739]	Country	Germany
[Ref.: #11739]	Country ISO 3 Code	DEU
[Ref.: #11739]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#River (Creek)
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY024343 (>99% sequence identity) for Nocardiaceae from Microbeatlas

Aquatic Samples	6494
Soil Samples	7777
Animal Samples	11681
Plant Samples	2835
Total Samples	28787

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #11739]	Pathogenicity (human)	yes, in single cases
[Ref.: #11739]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #11739]	Rhodococcus sp. DTB 16S ribosomal RNA gene, partial sequence	AY024343	1442	ENA	150410 tax ID

Availability in culture collections External links

[Ref.: #11739]

Culture collection no.

DSM 44534

[Ref.: #80135]

SI-ID 113668

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Bacterial Biotransformation of Oleic Acid: New Findings on the Formation of gamma-Dodecalactone and 10-Ketostearic Acid in the Culture of Micrococcus luteus.	Boratynski F, Szczepanska E, De Simeis D, Serra S, Brenna E	Molecules	10.3390/molecules25133024	2020	*
Metabolism	Simple Preparation of Rhodococcus erythropolis DSM 44534 as Biocatalyst to Oxidize Diols into the Optically Active Lactones.	Martinez-Rojas E, Olejniczak T, Neumann K, Garbe LA, Boratynski F	Chirality	10.1002/chir.22623	2016	*

References

#11739

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44534

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#80135

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID113668.1 )

* These data were automatically processed and therefore are not curated

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