Rhodococcus erythropolis A-0201 is an obligate aerobe, mesophilic, Gram-positive prokaryote that was isolated from soil.
Gram-positive rod-shaped obligate aerobe mesophilic genome sequence 16S sequence| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Mycobacteriales |
| Family Nocardiaceae |
| Genus Rhodococcus |
| Species Rhodococcus erythropolis |
| Full scientific name Rhodococcus erythropolis (Gray and Thornton 1928) Goodfellow and Alderson 1979 (Approved Lists 1980) |
| Synonyms (9) |
| @ref: | 10729 |
| multimedia content: | DSM_43066-1.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_43066-1.jpg |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref: | 10729 |
| multimedia content: | DSM_43066.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_43066.jpg |
| caption: | Medium 535 28°C |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 10729 | TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) | Medium recipe at MediaDive | Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water | ||
| 10729 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | Medium recipe at MediaDive | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water | ||
| 19935 | ISP 2 | Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes | |||
| 19935 | ISP 7 | Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 19935 | ISP 6 | Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 19935 | ISP 5 | Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes | |||
| 19935 | ISP 4 | Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml | |||
| 19935 | ISP 3 | Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms: | |||
| 34557 | MEDIUM 3 - Columbia agar | Columbia agar (39.000 g);distilled water (1000.000 ml) | |||
| 119131 | CIP Medium 3 | Medium recipe at CIP | |||
| 119132 | CIP Medium 3 | Medium recipe at CIP | |||
| 119132 | CIP Medium 72 | Medium recipe at CIP |
| 67770 | Observationquinones: MK-8(H2) |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68368 | 27613 ChEBI | amygdalin | - | fermentation | from API 20E |
| 19935 | 22599 ChEBI | arabinose | - | ||
| 68371 | 18305 ChEBI | arbutin | - | builds acid from | from API 50CH acid |
| 68371 | 17057 ChEBI | cellobiose | - | builds acid from | from API 50CH acid |
| 19935 | 62968 ChEBI | cellulose | +/- | ||
| 119131 | 16947 ChEBI | citrate | - | carbon source | |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 15824 ChEBI | D-fructose | - | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | - | builds acid from | from API 50CH acid |
| 68371 | 17634 ChEBI | D-glucose | - | builds acid from | from API 50CH acid |
| 68368 | 17634 ChEBI | D-glucose | - | fermentation | from API 20E |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 68368 | 16899 ChEBI | D-mannitol | - | fermentation | from API 20E |
| 68371 | 16024 ChEBI | D-mannose | - | builds acid from | from API 50CH acid |
| 68371 | 16988 ChEBI | D-ribose | - | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 119131 | 4853 ChEBI | esculin | - | hydrolysis | |
| 68371 | 4853 ChEBI | esculin | - | builds acid from | from API 50CH acid |
| 19935 | 28757 ChEBI | fructose | + | ||
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68368 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20E |
| 68371 | 28066 ChEBI | gentiobiose | - | builds acid from | from API 50CH acid |
| 68371 | 24265 ChEBI | gluconate | - | builds acid from | from API 50CH acid |
| 19935 | 17234 ChEBI | glucose | + | ||
| 68371 | 17754 ChEBI | glycerol | - | builds acid from | from API 50CH acid |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 119131 | 606565 ChEBI | hippurate | - | hydrolysis | |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68368 | 30849 ChEBI | L-arabinose | - | fermentation | from API 20E |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68368 | 62345 ChEBI | L-rhamnose | - | fermentation | from API 20E |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17716 ChEBI | lactose | - | builds acid from | from API 50CH acid |
| 68371 | 17306 ChEBI | maltose | - | builds acid from | from API 50CH acid |
| 19935 | 29864 ChEBI | mannitol | + | ||
| 68371 | 6731 ChEBI | melezitose | - | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68368 | 28053 ChEBI | melibiose | - | fermentation | from API 20E |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 19935 | 17268 ChEBI | myo-inositol | + | ||
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68368 | 17268 ChEBI | myo-inositol | - | fermentation | from API 20E |
| 68371 | 59640 ChEBI | N-acetylglucosamine | - | builds acid from | from API 50CH acid |
| 119131 | 17632 ChEBI | nitrate | - | reduction | |
| 119131 | 17632 ChEBI | nitrate | - | respiration | |
| 68368 | 17632 ChEBI | nitrate | - | reduction | from API 20E |
| 119131 | 16301 ChEBI | nitrite | - | reduction | |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid | |
| 19935 | 16634 ChEBI | raffinose | + | ||
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 19935 | 26546 ChEBI | rhamnose | - | ||
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | - | builds acid from | from API 50CH acid |
| 68368 | 30911 ChEBI | sorbitol | - | fermentation | from API 20E |
| 68371 | 28017 ChEBI | starch | - | builds acid from | from API 50CH acid |
| 19935 | 17992 ChEBI | sucrose | + | ||
| 68371 | 17992 ChEBI | sucrose | - | builds acid from | from API 50CH acid |
| 68368 | 17992 ChEBI | sucrose | - | fermentation | from API 20E |
| 68371 | 27082 ChEBI | trehalose | - | builds acid from | from API 50CH acid |
| 68368 | 27897 ChEBI | tryptophan | - | energy source | from API 20E |
| 68371 | 32528 ChEBI | turanose | - | builds acid from | from API 50CH acid |
| 68368 | 16199 ChEBI | urea | + | hydrolysis | from API 20E |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| 19935 | 18222 ChEBI | xylose | - |
| @ref | Metabolite | Is sensitive | Is resistant | |
|---|---|---|---|---|
| 119131 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 119131 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 119131 | amylase | + | ||
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 119131 | beta-galactosidase | + | 3.2.1.23 | |
| 68368 | beta-galactosidase | - | 3.2.1.23 | from API 20E |
| 68382 | beta-glucosidase | + | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 119131 | caseinase | - | 3.4.21.50 | |
| 119131 | catalase | + | 1.11.1.6 | |
| 119131 | DNase | - | ||
| 119131 | gamma-glutamyltransferase | + | 2.3.2.2 | |
| 68368 | gelatinase | - | from API 20E | |
| 119131 | lecithinase | - | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 119131 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 119131 | ornithine decarboxylase | - | 4.1.1.17 | |
| 119131 | oxidase | - | ||
| 119131 | phenylalanine ammonia-lyase | - | 4.3.1.24 | |
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 119131 | urease | + | 3.5.1.5 | |
| 68368 | urease | + | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | + | from API zym |
| @ref | Control | Alkaline phosphatase | Esterase (C 4) | 2-naphtyl caprylateEsterase Lipase (C 8) | Lipase (C 14) | L-leucyl-2-naphthylamideLeucine arylamidase | L-valyl-2-naphthylamideValine arylamidase | L-cystyl-2-naphthylamideCystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19935 | not determinedn.d. | + | + | + | - | + | + | + | + | - | + | + | - | - | - | + | + | - | - | - | |
| 10729 | - | - | - | +/- | - | + | + | +/- | - | - | - | - | - | - | - | + | + | - | - | - | |
| 119131 | - | + | + | + | + | + | + | - | - | - | + | + | - | - | - | + | + | - | - | - |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119131 | not determinedn.d. | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 67770 | ASM399087v1 assembly for Rhodococcus erythropolis JCM 3201 | contig | 1833 | 76.16 | ||||
| 67770 | ASM155259v1 assembly for Rhodococcus erythropolis NBRC 15567 | contig | 1219014 | 63.91 | ||||
| 66792 | ASM2213467v1 assembly for Rhodococcus erythropolis DSM 43066 | contig | 1833 | 57.88 | ||||
| 66792 | ASM1765652v1 assembly for Rhodococcus erythropolis CGMCC 1.2362 (pRZP1) | scaffold | 1833 | 49.69 | ||||
| 124043 | ASM3050515v1 assembly for Rhodococcus erythropolis CGMCC 1.2362 | scaffold | 1833 | 47.91 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Rhodococcus erythropolis strain ATCC 25544 16S ribosomal RNA gene, partial sequence | AY281110 | 738 | 1833 | ||
| 20218 | Rhodococcus erythropolis strain ATCC 25544 16S ribosomal RNA gene, partial sequence | GQ871829 | 606 | 1833 | ||
| 20218 | Rhodococcus erythropolis strain ATCC 4277 16S ribosomal RNA gene, partial sequence | AY281111 | 966 | 1833 | ||
| 20218 | R.erythropolis 16S rRNA gene (ATCC 4277T) | X81929 | 1314 | 1833 | ||
| 20218 | Rhodococcus erythropolis DSM43066T 16S ribosomal RNA gene, partial sequence | AF426150 | 617 | 1833 | ||
| 20218 | R.erythreus (DSM 43066) 16S rRNA gene | X79289 | 1476 | 1833 | ||
| 20218 | R.erythropolis 16s rRNA gene | X76691 | 1367 | 1833 | ||
| 124043 | Rhodococcus erythropolis gene for 16S rRNA type I, partial sequence, strain: JCM 3201. | AB429546 | 1440 | 1833 | ||
| 124043 | Rhodococcus erythropolis gene for 16S rRNA type II, partial sequence, strain: JCM 3201. | AB429553 | 1440 | 1833 | ||
| 124043 | Rhodococcus erythropolis strain NBRC 15567 16S ribosomal RNA gene, partial sequence. | MW111163 | 649 | 1833 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 97.30 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 94.50 | no |
| 125439 | motility | BacteriaNetⓘ | no | 90.20 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 77.00 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 91.52 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 97.99 | yes |
| 125438 | spore-forming | spore-formingⓘ | yes | 57.01 | no |
| 125438 | aerobic | aerobicⓘ | yes | 84.83 | yes |
| 125438 | thermophilic | thermophileⓘ | no | 97.50 | no |
| 125438 | flagellated | motile2+ⓘ | no | 92.50 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Sustainable Synthesis of Trimethylolpropane, a Biobased Polyol from Renewable Resources by an Integrated Process of Biotechnology and Chemical Reactions. | Sayed M, Elsabaa H, Han J, Choi J, Sayed WF, Salem WM, Temerk HA, Xu Y, Pyo SH. | ACS Omega | 10.1021/acsomega.5c04762 | 2025 | ||
| Diet-derived urolithin A is produced by a dehydroxylase encoded by human gut Enterocloster species. | Pidgeon R, Mitchell S, Shamash M, Suleiman L, Dridi L, Maurice CF, Castagner B. | Nat Commun | 10.1038/s41467-025-56266-2 | 2025 | ||
| Partner-assisted artificial selection of a secondary function for efficient bioremediation. | Zaccaria M, Sandlin N, Soen Y, Momeni B. | iScience | 10.1016/j.isci.2023.107632 | 2023 | ||
| Optimization of Rhodococcus erythropolis JCM3201T Nutrient Media to Improve Biomass, Lipid, and Carotenoid Yield Using Response Surface Methodology. | Engelhart-Straub S, Haack M, Awad D, Brueck T, Mehlmer N. | Microorganisms | 10.3390/microorganisms11092147 | 2023 | ||
| Water Stress-Driven Changes in Bacterial Cell Surface Properties. | Karagulyan M, Goebel MO, Diehl D, Abu Quba AA, Kastner M, Bachmann J, Wick LY, Schaumann GE, Miltner A. | Appl Environ Microbiol | 10.1128/aem.00732-22 | 2022 | ||
| Metabolism | Exploring the abundance of oleate hydratases in the genus Rhodococcus-discovery of novel enzymes with complementary substrate scope. | Busch H, Tonin F, Alvarenga N, van den Broek M, Lu S, Daran JM, Hanefeld U, Hagedoorn PL. | Appl Microbiol Biotechnol | 10.1007/s00253-020-10627-7 | 2020 | |
| Expression of Genes for a Flavin Adenine Dinucleotide-Binding Oxidoreductase and a Methyltransferase from Mycobacterium chlorophenolicum Is Necessary for Biosynthesis of 10-Methyl Stearic Acid from Oleic Acid in Escherichia coli. | Machida S, Bakku RK, Suzuki I. | Front Microbiol | 10.3389/fmicb.2017.02061 | 2017 | ||
| Bacterial conversion of depolymerized Kraft lignin. | Ravi K, Abdelaziz OY, Nobel M, Garcia-Hidalgo J, Gorwa-Grauslund MF, Hulteberg CP, Liden G. | Biotechnol Biofuels | 10.1186/s13068-018-1240-7 | 2018 | ||
| Enantioselective Michael addition of water. | Chen BS, Resch V, Otten LG, Hanefeld U. | Chemistry | 10.1002/chem.201405579 | 2015 | ||
| Transposition of the IS21-related element IS1415 in Rhodococcus erythropolis. | Nagy I, Schoofs G, Vanderleyden J, De Mot R. | J Bacteriol | 10.1128/jb.179.14.4635-4638.1997 | 1997 | ||
| Metabolism | Conservation of plasmid-encoded dibenzothiophene desulfurization genes in several rhodococci. | Denis-Larose C, Labbe D, Bergeron H, Jones AM, Greer CW, al-Hawari J, Grossman MJ, Sankey BM, Lau PC. | Appl Environ Microbiol | 10.1128/aem.63.7.2915-2919.1997 | 1997 | |
| Metabolism | Antimicrobial peptide expression in a wild tobacco plant reveals the limits of host-microbe-manipulations in the field. | Weinhold A, Karimi Dorcheh E, Li R, Rameshkumar N, Baldwin IT. | Elife | 10.7554/elife.28715 | 2018 | |
| Horizontal Gene Transfer of Genes Encoding Copper-Containing Membrane-Bound Monooxygenase (CuMMO) and Soluble Di-iron Monooxygenase (SDIMO) in Ethane- and Propane-Oxidizing Rhodococcus Bacteria. | Zou B, Huang Y, Zhang PP, Ding XM, Op den Camp HJM, Quan ZX. | Appl Environ Microbiol | 10.1128/aem.00227-21 | 2021 | ||
| Metabolism | Immobilization of R. erythropolis in alginate-based artificial cells for simulated plaque degradation in aqueous media. | Mobed-Miremadi M, Darbha S. | J Microencapsul | 10.3109/02652048.2013.814726 | 2014 | |
| Metabolism | Purification and characterisation of the extracellular cholesterol oxidase enzyme from Enterococcus hirae. | Yehia HM, Hassanein WA, Ibraheim SM. | BMC Microbiol | 10.1186/s12866-015-0517-2 | 2015 | |
| Enzymology | Identification and statistical optimization of fermentation conditions for a newly isolated extracellular cholesterol oxidase-producing Streptomyces cavourensis strain NEAE-42. | El-Naggar Nel-A, El-Shweihy NM, El-Ewasy SM. | BMC Microbiol | 10.1186/s12866-016-0830-4 | 2016 | |
| Extracellular cholesterol oxidase production by Streptomyces aegyptia, in vitro anticancer activities against rhabdomyosarcoma, breast cancer cell-lines and in vivo apoptosis. | El-Naggar NE, Soliman HM, El-Shweihy NM. | Sci Rep | 10.1038/s41598-018-20786-3 | 2018 | ||
| Enzymology | Targeted disruption of the kstD gene encoding a 3-ketosteroid delta(1)-dehydrogenase isoenzyme of Rhodococcus erythropolis strain SQ1. | van Der Geize R, Hessels GI, van Gerwen R, Vrijbloed JW, van Der Meijden P, Dijkhuizen L. | Appl Environ Microbiol | 10.1128/aem.66.5.2029-2036.2000 | 2000 | |
| Enzymology | Use of PCR and reverse line blot hybridization macroarray based on 16S-23S rRNA gene internal transcribed spacer sequences for rapid identification of 34 mycobacterium species. | Xiong L, Kong F, Yang Y, Cheng J, Gilbert GL. | J Clin Microbiol | 10.1128/jcm.00633-06 | 2006 | |
| Phylogeny | Rapid identification of mycolic acid patterns of mycobacteria by high-performance liquid chromatography using pattern recognition software and a Mycobacterium library. | Glickman SE, Kilburn JO, Butler WR, Ramos LS. | J Clin Microbiol | 10.1128/jcm.32.3.740-745.1994 | 1994 | |
| Rhodococcus erythropolis ATCC 4277 behavior against different metals and its potential use in waste biomining. | das Neves Vasconcellos Brandao IY, de Souza Silva PHB, Castori TV, de Souza YT, de Souza RG, Batista AF, Petroni SLG, Nazareth Zanutto TC, de Campos CBL, Maass D. | Bioprocess Biosyst Eng | 10.1007/s00449-024-03048-7 | 2024 | ||
| Pathogenicity | A Review of Research Progress on the Microbial or Enzymatic Degradation and Mechanism of Aflatoxin B1. | Zhang A, Yang J. | J Microbiol Biotechnol | 10.4014/jmb.2504.04044 | 2025 | |
| Biodesulfurization of Fossil Fuels: Analysis and Prospective. | Al-Khazaali WMK, Ataei SA, Khesareh S. | F1000Res | 10.12688/f1000research.133427.1 | 2023 | ||
| Enzymology | A Magnetically and Electrically Powered Hybrid Micromotor in Conductive Solutions: Synergistic Propulsion Effects and Label-Free Cargo Transport and Sensing. | Wu Y, Yakov S, Fu A, Yossifon G. | Adv Sci (Weinh) | 10.1002/advs.202204931 | 2023 | |
| Hybrid use of Raman spectroscopy and artificial neural networks to discriminate Mycobacterium bovis BCG and other Mycobacteriales. | Macgregor-Fairlie M, De Gomes P, Weston D, Rickard JJS, Goldberg Oppenheimer P. | PLoS One | 10.1371/journal.pone.0293093 | 2023 | ||
| Active particles as mobile microelectrodes for selective bacteria electroporation and transport. | Wu Y, Fu A, Yossifon G. | Sci Adv | 10.1126/sciadv.aay4412 | 2020 | ||
| Metabolism | Metabolic RNA labeling for probing RNA dynamics in bacteria. | Meng L, Guo Y, Tang Q, Huang R, Xie Y, Chen X. | Nucleic Acids Res | 10.1093/nar/gkaa1111 | 2020 | |
| Metabolism | Biological Control and Mitigation of Aflatoxin Contamination in Commodities. | Peles F, Sipos P, Kovacs S, Gyori Z, Pocsi I, Pusztahelyi T. | Toxins (Basel) | 10.3390/toxins13020104 | 2021 | |
| Biotechnological potential of microbial bio-surfactants, their significance, and diverse applications. | Kumari R, Singha LP, Shukla P. | FEMS Microbes | 10.1093/femsmc/xtad015 | 2023 | ||
| Processing of Metals and Metalloids by Actinobacteria: Cell Resistance Mechanisms and Synthesis of Metal(loid)-Based Nanostructures. | Presentato A, Piacenza E, Turner RJ, Zannoni D, Cappelletti M. | Microorganisms | 10.3390/microorganisms8122027 | 2020 | ||
| Metabolism | Biodegradation of the organic disulfide 4,4'-dithiodibutyric acid by Rhodococcus spp. | Khairy H, Wubbeler JH, Steinbuchel A. | Appl Environ Microbiol | 10.1128/aem.02059-15 | 2015 | |
| Metabolism | A 2-Hydroxypyridine Catabolism Pathway in Rhodococcus rhodochrous Strain PY11. | Vaitekunas J, Gasparaviciute R, Rutkiene R, Tauraite D, Meskys R. | Appl Environ Microbiol | 10.1128/aem.02975-15 | 2016 | |
| Pathogenicity | Biocontrol of Mycotoxigenic Fungi Using Bacteria Isolated from Ecological Vineyard Soils. | de la Huerta-Bengoechea P, Gil-Serna J, Melguizo C, Ramos AJ, Prim M, Vazquez C, Patino B. | J Fungi (Basel) | 10.3390/jof8111136 | 2022 | |
| Biosurfactant production by rhodococcus erythropolis and its application to oil removal. | Pacheco GJ, Ciapina EM, Gomes Ede B, Junior NP. | Braz J Microbiol | 10.1590/s1517-83822010000300019 | 2010 | ||
| Biotechnology of Rhodococcus for the production of valuable compounds. | Cappelletti M, Presentato A, Piacenza E, Firrincieli A, Turner RJ, Zannoni D. | Appl Microbiol Biotechnol | 10.1007/s00253-020-10861-z | 2020 | ||
| Metabolism | Characterization of a (2R,3R)-2,3-Butanediol Dehydrogenase from Rhodococcus erythropolis WZ010. | Yu M, Huang M, Song Q, Shao J, Ying X. | Molecules | 10.3390/molecules20047156 | 2015 | |
| Pathogenicity | Characteristics, Occurrence, Detection and Detoxification of Aflatoxins in Foods and Feeds. | Nazhand A, Durazzo A, Lucarini M, Souto EB, Santini A. | Foods | 10.3390/foods9050644 | 2020 | |
| Conjugal transfer of a virulence plasmid in the opportunistic intracellular actinomycete Rhodococcus equi. | Tripathi VN, Harding WC, Willingham-Lane JM, Hondalus MK. | J Bacteriol | 10.1128/jb.01210-12 | 2012 | ||
| Phage as a source of antibacterial genes: Multiple inhibitory products encoded by Rhodococcus phage YF1. | Shibayama Y, Dabbs ER. | Bacteriophage | 10.4161/bact.1.4.17746 | 2011 | ||
| Metabolism | Unusual production of glutathione in Actinobacteria. | Johnson T, Newton GL, Fahey RC, Rawat M. | Arch Microbiol | 10.1007/s00203-008-0423-1 | 2009 | |
| Rhodococcus strains as a good biotool for neutralizing pharmaceutical pollutants and obtaining therapeutically valuable products: Through the past into the future. | Ivshina I, Bazhutin G, Tyumina E. | Front Microbiol | 10.3389/fmicb.2022.967127 | 2022 | ||
| Pathogenicity | Antibiotic-resistant bacteria in the guts of insects feeding on plants: prospects for discovering plant-derived antibiotics. | Ignasiak K, Maxwell A. | BMC Microbiol | 10.1186/s12866-017-1133-0 | 2017 | |
| Metabolism | Simultaneous valorization and biocatalytic upgrading of heavy vacuum gas oil by the biosurfactant-producing Pseudomonas aeruginosa AK6U. | Ismail WA, Mohamed ME, Awadh MN, Obuekwe C, El Nayal AM. | Microb Biotechnol | 10.1111/1751-7915.12741 | 2017 | |
| Whole Cell Actinobacteria as Biocatalysts. | Anteneh YS, Franco CMM. | Front Microbiol | 10.3389/fmicb.2019.00077 | 2019 | ||
| Evaluation of conventional and response surface level optimisation of n-dodecane (n-C12) mineralisation by psychrotolerant strains isolated from pristine soil at Southern Victoria Island, Antarctica. | Habib S, Ahmad SA, Johari WLW, Shukor MYA, Alias SA, Khalil KA, Yasid NA. | Microb Cell Fact | 10.1186/s12934-018-0889-8 | 2018 | ||
| Benchmarking DNA Extraction Methods for Phylogenomic Analysis of Sub-Antarctic Rhodococcus and Williamsia Species. | Nahar A, Baker AL, Nichols DS, Bowman JP, Britz ML. | Microorganisms | 10.3390/microorganisms9061253 | 2021 | ||
| Enzymology | A Rhodococcus qsdA-encoded enzyme defines a novel class of large-spectrum quorum-quenching lactonases. | Uroz S, Oger PM, Chapelle E, Adeline MT, Faure D, Dessaux Y. | Appl Environ Microbiol | 10.1128/aem.02014-07 | 2008 | |
| Microbial degradation of steroid sex hormones: implications for environmental and ecological studies. | Chiang YR, Wei ST, Wang PH, Wu PH, Yu CP. | Microb Biotechnol | 10.1111/1751-7915.13504 | 2020 | ||
| Enzymology | Identification of a new class of cytochrome P450 from a Rhodococcus sp. | Roberts GA, Grogan G, Greter A, Flitsch SL, Turner NJ. | J Bacteriol | 10.1128/jb.184.14.3898-3908.2002 | 2002 | |
| Enzymology | Isolation and characterization of a rolling-circle-type plasmid from Rhodococcus erythropolis and application of the plasmid to multiple-recombinant-protein expression. | Nakashima N, Tamura T. | Appl Environ Microbiol | 10.1128/aem.70.9.5557-5568.2004 | 2004 | |
| Enzymology | Thiocarbamate herbicide-inducible nonheme haloperoxidase of Rhodococcus erythropolis NI86/21. | De Schrijver A, Nagy I, Schoofs G, Proost P, Vanderleyden J, van Pee KH, De Mot R. | Appl Environ Microbiol | 10.1128/aem.63.5.1911-1916.1997 | 1997 | |
| Enzymology | Rapid identification of clinically relevant Nocardia species to genus level by 16S rRNA gene PCR. | Laurent FJ, Provost F, Boiron P. | J Clin Microbiol | 10.1128/jcm.37.1.99-102.1999 | 1999 | |
| Metabolism | Synthesis of imidazol-2-yl amino acids by using cells from alkane-oxidizing bacteria. | Mikolasch A, Hammer E, Schauer F. | Appl Environ Microbiol | 10.1128/aem.69.3.1670-1679.2003 | 2003 | |
| Construction of an Escherichia coli-Rhodococcus shuttle vector and plasmid transformation in Rhodococcus spp. | Singer ME, Finnerty WR. | J Bacteriol | 10.1128/jb.170.2.638-645.1988 | 1988 | ||
| Cost effective technologies and renewable substrates for biosurfactants' production. | Banat IM, Satpute SK, Cameotra SS, Patil R, Nyayanit NV. | Front Microbiol | 10.3389/fmicb.2014.00697 | 2014 | ||
| Metabolism | Biodegradation of variable-chain-length alkanes at low temperatures by a psychrotrophic Rhodococcus sp. | Whyte LG, Hawari J, Zhou E, Bourbonniere L, Inniss WE, Greer CW. | Appl Environ Microbiol | 10.1128/aem.64.7.2578-2584.1998 | 1998 | |
| Surfactants tailored by the class Actinobacteria. | Kugler JH, Le Roes-Hill M, Syldatk C, Hausmann R. | Front Microbiol | 10.3389/fmicb.2015.00212 | 2015 | ||
| Metabolism | Cloning and characterization of benzoate catabolic genes in the gram-positive polychlorinated biphenyl degrader Rhodococcus sp. strain RHA1. | Kitagawa W, Miyauchi K, Masai E, Fukuda M. | J Bacteriol | 10.1128/jb.183.22.6598-6606.2001 | 2001 | |
| Metabolism | Degradation of the thiocarbamate herbicide EPTC (S-ethyl dipropylcarbamothioate) and biosafening by Rhodococcus sp. strain NI86/21 involve an inducible cytochrome P-450 system and aldehyde dehydrogenase. | Nagy I, Schoofs G, Compernolle F, Proost P, Vanderleyden J, de Mot R. | J Bacteriol | 10.1128/jb.177.3.676-687.1995 | 1995 | |
| Enzymology | Gene cloning and characterization of multiple alkane hydroxylase systems in Rhodococcus strains Q15 and NRRL B-16531. | Whyte LG, Smits TH, Labbe D, Witholt B, Greer CW, van Beilen JB. | Appl Environ Microbiol | 10.1128/aem.68.12.5933-5942.2002 | 2002 | |
| Metabolism | Cloning of the genes for degradation of the herbicides EPTC (S-ethyl dipropylthiocarbamate) and atrazine from Rhodococcus sp. strain TE1. | Shao ZQ, Behki R. | Appl Environ Microbiol | 10.1128/aem.61.5.2061-2065.1995 | 1995 | |
| Rapid detection of Mycobacterium avium in stool samples from AIDS patients by immunomagnetic PCR. | Li Z, Bai GH, von Reyn CF, Marino P, Brennan MJ, Gine N, Morris SL. | J Clin Microbiol | 10.1128/jcm.34.8.1903-1907.1996 | 1996 | ||
| Metabolism | Growth and cholesterol oxidation by Mycobacterium species in Tween 80 medium. | Smith M, Zahnley J, Pfeifer D, Goff D. | Appl Environ Microbiol | 10.1128/aem.59.5.1425-1429.1993 | 1993 | |
| Pathogenicity | Relationships between colony morphotypes and oil tolerance in Rhodococcus rhodochrous. | Iwabuchi N, Sunairi M, Anzai H, Nakajima M, Harayama S. | Appl Environ Microbiol | 10.1128/aem.66.11.5073-5077.2000 | 2000 | |
| Complete Genome Sequence of Rhodococcus qingshengii N9T-4. | Obi N, Moriuchi R, Dohra H, Kimbara K, Shintani M, Yoshida N. | Microbiol Resour Announc | 10.1128/mra.00891-22 | 2022 | ||
| Draft Genome Sequence of Rhodococcus erythropolis VKPM Ac-1659, a Putative Oil-Degrading Strain Isolated from Polluted Soil in Siberia. | Korzhenkov AA, Bakhmutova ED, Izotova AO, Bavtushnyi AA, Sidoruk KV, Patrusheva EV, Patrushev MV, Toshchakov SV. | Microbiol Resour Announc | 10.1128/mra.00535-21 | 2021 | ||
| Metabolism of Aldoximes and Nitriles in Plant-Associated Bacteria and Its Potential in Plant-Bacteria Interactions. | Radisch R, Patek M, Kristkova B, Winkler M, Kren V, Martinkova L. | Microorganisms | 10.3390/microorganisms10030549 | 2022 | ||
| Computational-based insights into the phylogeny, structure, and function of Rhodococcus alkane-1-monooxygenase. | Pal S, Sengupta K. | 3 Biotech | 10.1007/s13205-020-02388-x | 2020 | ||
| Enzymology | Distribution of aldoxime dehydratase in microorganisms. | Kato Y, Ooi R, Asano Y. | Appl Environ Microbiol | 10.1128/aem.66.6.2290-2296.2000 | 2000 | |
| Genetics | Nocardia genomes are a large reservoir of diverse gene content, biosynthetic gene clusters, and species-specific genes. | Eripogu KK, Yu C-P, Tsai A, Lin J-J, Lin H-C, Li W-H. | mBio | 10.1128/mbio.00947-25 | 2025 | |
| Pathogenicity | A Hydrolase Produced by Rhodococcus erythropolis HQ Is Responsible for the Detoxification of Zearalenone. | Hu J, Du S, Qiu H, Wu Y, Hong Q, Wang G, Mohamed SR, Lee YW, Xu J. | Toxins (Basel) | 10.3390/toxins15120688 | 2023 | |
| Draft Genome Sequence of Rhodococcus erythropolis HX7, a Psychrotolerant Soil-Derived Oil Degrader. | Novikov AD, Lavrov KV, Kasianov AS, Korzhenkov AA, Gubanova TA, Yanenko AS. | Microbiol Resour Announc | 10.1128/mra.01353-20 | 2021 | ||
| Characterization of trehalolipid biosurfactant produced by the novel marine strain Rhodococcus sp. SP1d and its potential for environmental applications. | Andreolli M, Villanova V, Zanzoni S, D'Onofrio M, Vallini G, Secchi N, Lampis S. | Microb Cell Fact | 10.1186/s12934-023-02128-9 | 2023 | ||
| Phylogeny | Isolation and characterization of fast-growing green snow bacteria from coastal East Antarctica. | Smirnova M, Miamin U, Kohler A, Valentovich L, Akhremchuk A, Sidarenka A, Dolgikh A, Shapaval V. | Microbiologyopen | 10.1002/mbo3.1152 | 2021 | |
| iChip-Inspired Isolation, Bioactivities and Dereplication of Actinomycetota from Portuguese Beach Sediments. | Dos Santos JDN, Joao SA, Martin J, Vicente F, Reyes F, Lage OM. | Microorganisms | 10.3390/microorganisms10071471 | 2022 | ||
| Biological conversion of aromatic monolignol compounds by a Pseudomonas isolate from sediments of the Baltic Sea. | Ravi K, Garcia-Hidalgo J, Nobel M, Gorwa-Grauslund MF, Liden G. | AMB Express | 10.1186/s13568-018-0563-x | 2018 | ||
| Parallel evolution of alternate morphotypes of Chryseobacterium gleum during experimental evolution with Caenorhabditis elegans. | Duckett M, Taylor MN, Bowman C, Vega NM. | FEMS Microbiol Ecol | 10.1093/femsec/fiae039 | 2024 | ||
| Microbes as carbendazim degraders: opportunity and challenge. | Zhou Y, Wang T, Wang L, Wang P, Chen F, Bhatt P, Chen S, Cui X, Yang Y, Zhang W. | Front Microbiol | 10.3389/fmicb.2024.1424825 | 2024 | ||
| Enzymology | Preparation, Performances, and Mechanisms of Microbial Flocculants for Wastewater Treatment. | Li H, Wu S, Du C, Zhong Y, Yang C. | Int J Environ Res Public Health | 10.3390/ijerph17041360 | 2020 | |
| Phylogeny | First case of bloodstream infection caused by Rhodococcus erythropolis. | Baba H, Nada T, Ohkusu K, Ezaki T, Hasegawa Y, Paterson DL. | J Clin Microbiol | 10.1128/jcm.00294-09 | 2009 | |
| Horizontal Spread of Rhodococcus equi Macrolide Resistance Plasmid pRErm46 across Environmental Actinobacteria. | Alvarez-Narvaez S, Giguere S, Berghaus LJ, Dailey C, Vazquez-Boland JA. | Appl Environ Microbiol | 10.1128/aem.00108-20 | 2020 | ||
| Metabolism | Conversion of the Pseudomonas aeruginosa Quinolone Signal and Related Alkylhydroxyquinolines by Rhodococcus sp. Strain BG43. | Muller C, Birmes FS, Niewerth H, Fetzner S. | Appl Environ Microbiol | 10.1128/aem.02342-14 | 2014 | |
| Metabolism | Proteomics and Metabolomics Analyses to Elucidate the Desulfurization Pathway of Chelatococcus sp. | Bordoloi NK, Bhagowati P, Chaudhuri MK, Mukherjee AK. | PLoS One | 10.1371/journal.pone.0153547 | 2016 | |
| Metabolism | Rhodococcus erythropolis DCL14 contains a novel degradation pathway for limonene. | van der Werf MJ, Swarts HJ, de Bont JA. | Appl Environ Microbiol | 10.1128/aem.65.5.2092-2102.1999 | 1999 | |
| Phylogeny | Differential identification of Mycobacterium tuberculosis complex and nontuberculous mycobacteria by duplex PCR assay using the RNA polymerase gene (rpoB). | Kim BJ, Hong SK, Lee KH, Yun YJ, Kim EC, Park YG, Bai GH, Kook YH. | J Clin Microbiol | 10.1128/jcm.42.3.1308-1312.2004 | 2004 | |
| Enlightening the Path to Protein Engineering: Chemoselective Turn-On Probes for High-Throughput Screening of Enzymatic Activity. | Hecko S, Schiefer A, Badenhorst CPS, Fink MJ, Mihovilovic MD, Bornscheuer UT, Rudroff F. | Chem Rev | 10.1021/acs.chemrev.2c00304 | 2023 | ||
| A high-throughput screening assay for distinguishing nitrile hydratases from nitrilases. | Angelini LM, da Silva AR, Rocco Lde F, Milagre CD. | Braz J Microbiol | 10.1590/s1517-838246120130851 | 2015 | ||
| Metabolism | Different bioavailability of phenanthrene to two bacterial species and effects of trehalose lipids on the bioavailability. | Chang JS, Cha DK, Radosevich M, Jin Y | J Environ Sci Health A Tox Hazard Subst Environ Eng | 10.1080/10934529.2020.1712176 | 2020 | |
| Metabolism | Biomining of iron-containing nanoparticles from coal tailings. | Maass D, de Medeiros Machado M, Rovaris BC, Bernardin AM, de Oliveira D, Hotza D | Appl Microbiol Biotechnol | 10.1007/s00253-019-10001-2 | 2019 | |
| Genetics | Genome Sequence of Rhodococcus erythropolis Type Strain JCM 3201. | Yoshida K, Kitagawa W, Ishiya K, Mitani Y, Nakashima N, Aburatani S, Tamura T | Microbiol Resour Announc | 10.1128/MRA.01730-18 | 2019 | |
| Metabolism | Optimal Production of a Rhodococcus erythropolis ATCC 4277 Biocatalyst for Biodesulfurization and Biodenitrogenation Applications. | Todescato D, Maass D, Mayer DA, Vladimir Oliveira J, de Oliveira D, Ulson de Souza SMAG, Ulson de Souza AA | Appl Biochem Biotechnol | 10.1007/s12010-017-2505-5 | 2017 | |
| Metabolism | An Evaluation of Kinetic Models in the Biodesulfurization of Synthetic Oil by Rhodococcus erythropolis ATCC 4277. | Maass D, Mayer DA, Moritz DE, Oliveira D, de Souza AA, Souza SM | Appl Biochem Biotechnol | 10.1007/s12010-015-1764-2 | 2015 | |
| Metabolism | Desulfurization and denitrogenation of heavy gas oil by Rhodococcus erythropolis ATCC 4277. | Maass D, Todescato D, Moritz DE, Oliveira JV, Oliveira D, Ulson de Souza AA, Guelli Souza SM | Bioprocess Biosyst Eng | 10.1007/s00449-015-1386-7 | 2015 | |
| Metabolism | Metabolomics of the bio-degradation process of aflatoxin B1 by actinomycetes at an initial pH of 6.0. | Eshelli M, Harvey L, Edrada-Ebel R, McNeil B | Toxins (Basel) | 10.3390/toxins7020439 | 2015 | |
| Metabolism | Biodesulfurization of a system containing synthetic fuel using Rhodococcus erythropolis ATCC 4277. | Maass D, de Oliveira D, de Souza AA, Souza SM | Appl Biochem Biotechnol | 10.1007/s12010-014-1189-3 | 2014 | |
| Enzymology | [Cloning, expression and characterization of chiral alcohol dehydrogenase from Rhodococcus erythropolis ATCC 4277]. | Zhu Q, Jia H, Li Y, Jia L, Ma Y, Wei P | Wei Sheng Wu Xue Bao | 2012 | ||
| Enzymology | A high-throughput screening strategy for nitrile-hydrolyzing enzymes based on ferric hydroxamate spectrophotometry. | He YC, Ma CL, Xu JH, Zhou L | Appl Microbiol Biotechnol | 10.1007/s00253-010-2977-5 | 2010 | |
| Phylogeny | Phylogenetic analysis of Rhodococcus erythropolis based on the variation of ribosomal proteins as observed by matrix-assisted laser desorption ionization-mass spectrometry without using genome information. | Teramoto K, Kitagawa W, Sato H, Torimura M, Tamura T, Tao H | J Biosci Bioeng | 10.1016/j.jbiosc.2009.04.010 | 2009 | |
| Enzymology | Isolation and characterization of the Rhodococcus opacus thiostrepton-inducible genes tipAL and tipAS: application for recombinant protein expression in Rhodococcus. | Dong L, Nakashima N, Tamura N, Tamura T | FEMS Microbiol Lett | 10.1016/j.femsle.2004.06.012 | 2004 | |
| Enzymology | Diversity of nitrile hydratase and amidase enzyme genes in Rhodococcus erythropolis recovered from geographically distinct habitats. | Brandao PF, Clapp JP, Bull AT | Appl Environ Microbiol | 10.1128/AEM.69.10.5754-5766.2003 | 2003 | |
| Metabolism | Color removal ability of a streptomycin resistant decolorizing strain Rhodococcus erythropolis (ATCC:4277.1). | Hu TL | Water Sci Technol | 2003 | ||
| Metabolism | Rhamnolipid stimulates uptake of hydrophobic compounds by Pseudomonas aeruginosa. | Noordman WH, Janssen DB | Appl Environ Microbiol | 10.1128/AEM.68.9.4502-4508.2002 | 2002 | |
| Phylogeny | Reclassification of Nocardioides simplex ATCC 13260, ATCC 19565, and ATCC 19566 as Rhodococcus erythropolis. | Yoon JH, Lee JS, Shin YK, Park YH, Lee ST | Int J Syst Bacteriol | 10.1099/00207713-47-3-904 | 1997 | |
| Enzymology | A Long-Chain Secondary Alcohol Dehydrogenase from Rhodococcus erythropolis ATCC 4277. | Ludwig B, Akundi A, Kendall K | Appl Environ Microbiol | 10.1128/aem.61.10.3729-3733.1995 | 1995 | |
| Enzymology | Rhodococcus erythropolis ATCC 25544 as a suitable source of cholesterol oxidase: cell-linked and extracellular enzyme synthesis, purification and concentration. | Sojo MM, Bru RR, Garcia-Carmona FF | BMC Biotechnol | 10.1186/1472-6750-2-3 | 2002 | |
| Ultrasound enhanced bioprocesses: cholesterol oxidation by Rhodococcus erythropolis. | Bar R | Biotechnol Bioeng | 10.1002/bit.260320510 | 1988 | ||
| Auxin production and plant growth promotion by Microbacterium albopurpureum sp. nov. from the rhizoplane of leafless Chiloschista parishii Seidenf. orchid. | Tsavkelova EA, Volynchikova EA, Potekhina NV, Lavrov KV, Avtukh AN. | Front Plant Sci | 10.3389/fpls.2024.1360828 | 2024 | ||
| Phylogeny | Rhodococcus psychrotolerans sp. nov., isolated from rhizosphere of Deschampsia antarctica. | Silva LJ, Souza DT, Genuario DB, Hoyos HAV, Santos SN, Rosa LH, Zucchi TD, Melo IS | Antonie Van Leeuwenhoek | 10.1007/s10482-017-0983-7 | 2017 | |
| Phylogeny | Rhodococcus jialingiae sp. nov., an actinobacterium isolated from sludge of a carbendazim wastewater treatment facility. | Wang Z, Xu J, Li Y, Wang K, Wang Y, Hong Q, Li WJ, Li SP | Int J Syst Evol Microbiol | 10.1099/ijs.0.013219-0 | 2009 | |
| Phylogeny | Rhodococcus qingshengii sp. nov., a carbendazim-degrading bacterium. | Xu JL, He J, Wang ZC, Wang K, Li WJ, Tang SK, Li SP | Int J Syst Evol Microbiol | 10.1099/ijs.0.65095-0 | 2007 |
| #10729 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43066 |
| #19935 | Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig . |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #34557 | ; Curators of the CIP; |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68368 | Automatically annotated from API 20E . |
| #68371 | Automatically annotated from API 50CH acid . |
| #68382 | Automatically annotated from API zym . |
| #119131 | Collection of Institut Pasteur ; Curators of the CIP; CIP 104179 |
| #119132 | Collection of Institut Pasteur ; Curators of the CIP; CIP 104662 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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