Name: Nocardia thraciensis A2019
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 10831

Type strain:

Species: Nocardia thraciensis

Strain Designation: A2019

Culture col. no.: DSM 45517, KCTC 19985, NRRL B-24834

Strain history: <- N Sahin, Ondokuz Mayis Univ., Turkey

NCBI tax ID(s): 882447 (species)

SI-ID 403511

DSM 45517

Section

Nocardia thraciensis A2019 is an aerobe, mesophilic, Gram-positive bacterium that was isolated from arid soil.

Gram-positive
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Nocardiaceae*
	Genus	*Nocardia*
	Species	**Nocardia thraciensis**
	Full Scientific Name (LPSN)	Nocardia thraciensis Sazak et al. 2012

Information on morphological and physiological properties Morphology

[Ref.: #30241]	Gram stain	positive
[Ref.: #67771]	Gram stain	positive

[Ref.: #30241]	Motility	no

[Ref.: #30241]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #17493]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #17493]

Culture medium growth

[Ref.: #17493]

Culture medium link

Medium recipe at MediaDive

[Ref.: #17493]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #17493]	growth	28 °C
[Ref.: #30241]	growth	20-37 °C
[Ref.: #30241]	optimum	28 °C
[Ref.: #67771]	growth	28 °C

[Ref.: #17493]	Temperature range	mesophilic
[Ref.: #30241]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #30241]			optimum	7
[Ref.: #30241]			growth	06-09

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30241]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30241]		NaCl		growth	0-4	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30241]	arabinose ChEBI	+	carbon source
[Ref.: #30241]	dextrin ChEBI	+	carbon source
[Ref.: #30241]	esculin ChEBI	+	hydrolysis
[Ref.: #30241]	fructose ChEBI	+	carbon source
[Ref.: #30241]	galactose ChEBI	+	carbon source
[Ref.: #30241]	glucose ChEBI	+	carbon source
[Ref.: #30241]	maltose ChEBI	+	carbon source
[Ref.: #30241]	mannitol ChEBI	+	carbon source
[Ref.: #30241]	mannose ChEBI	+	carbon source
[Ref.: #30241]	propionate ChEBI	+	carbon source
[Ref.: #30241]	rhamnose ChEBI	+	carbon source
[Ref.: #30241]	salicin ChEBI	+	carbon source
[Ref.: #30241]	sorbitol ChEBI	+	carbon source
[Ref.: #30241]	succinate ChEBI	+	carbon source
[Ref.: #30241]	sucrose ChEBI	+	carbon source
[Ref.: #30241]	tween 20 ChEBI	+	carbon source
[Ref.: #30241]	xylose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #30241]		gelatinase	+
[Ref.: #30241]		urease	+	3.5.1.5

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #17493]	Sample type/isolated from	arid soil
[Ref.: #17493]	Geographic location (country and/or sea, region)	Edirne, Lalapasa, Sinankoy
[Ref.: #17493]	Country	Turkey
[Ref.: #17493]	Country ISO 3 Code	TUR
[Ref.: #17493]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From soil, Agricultural estate
[Ref.: #67771]	Geographic location (country and/or sea, region)	Edirne
[Ref.: #67771]	Country	Turkey
[Ref.: #67771]	Country ISO 3 Code	TUR
[Ref.: #67771]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Condition	#Xerophilic	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #17493]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #17493]	Nocardia thraciensis strain A2019 16S ribosomal RNA gene, partial sequence	HQ157184	1482	ENA	882447 tax ID

[Ref.: #17493]	GC-content	69.5 mol%	fluorimetric
[Ref.: #30241]	GC-content	69.5 mol%

Availability in culture collections External links

[Ref.: #17493]

Culture collection no.

DSM 45517, KCTC 19985, NRRL B-24834

[Ref.: #80092]

SI-ID 403511

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Nocardia goodfellowii sp. nov. and Nocardia thraciensis sp. nov., isolated from soil.	Sazak A, Sahin N, Camas M	Int J Syst Evol Microbiol	10.1099/ijs.0.031559-0	2011	*

References

#17493

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45517

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#30241

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26583 (see below)

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#80092

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID403511.1 )

#26583

IJSEM 1228 2012 ( DOI 10.1099/ijs.0.031559-0 , PubMed 21742817 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Nocardia thraciensis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF