Name: Nocardia jiangxiensis 43401
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 10802

Type strain:

Species: Nocardia jiangxiensis

Strain Designation: 43401

Culture col. no.: DSM 17684, AS 4.1905, CGMCC 4.1905, IFM 10633, JCM 12861, CIP 109010, NBRC 101359

Strain history: CIP <- 2005, JCM <- 2004, Y. Huang, Chinese Academy Sciences, Beijing, China: strain 43401

NCBI tax ID(s): 1206731 (strain), 282685 (species)

SI-ID 265616

CGMCC 4.1905, JCM 12861, DSM 17684, AS 4.1905, CIP 109010, NBRC 101359

Section

Nocardia jiangxiensis 43401 is an aerobe, spore-forming, mesophilic bacterium that builds an aerial mycelium and was isolated from the rhizosphere of goose-grass .

Gram-positive
rod-shaped
spore-forming
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Nocardiaceae*
	Genus	*Nocardia*
	Species	**Nocardia jiangxiensis**
	Full Scientific Name (LPSN)	Nocardia jiangxiensis Cui et al. 2005

Information on morphological and physiological properties Morphology

[Ref.: #31480]	Gram stain	positive
[Ref.: #120349]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #31480]	Cell shape	rod-shaped
[Ref.: #120349]	Cell shape	rod-shaped

[Ref.: #31480]	Motility	no
[Ref.: #120349]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %91.56

[Ref.: #69282]	Colony color	Colourless
[Ref.: #69282]	Cultivation medium used	ISP 3

[Ref.: #69282]	Colony color	Beige red (3012)
[Ref.: #69282]	Cultivation medium used	ISP 2

[Ref.: #69282]	Colony color	Beige red (3012)
[Ref.: #69282]	Cultivation medium used	ISP 4

[Ref.: #69282]	Colony color	Beige red (3012)
[Ref.: #69282]	Cultivation medium used	ISP 5

[Ref.: #69282]	Colony color	Beige red (3012)
[Ref.: #69282]	Cultivation medium used	ISP 6

[Ref.: #69282]	Colony color	Beige red (3012)
[Ref.: #69282]	Cultivation medium used	ISP 7

[Ref.: #69282]	Colony color	Pastel yellow (1034)
[Ref.: #69282]	Cultivation medium used	suter without tyrosine

[Ref.: #69282]	Colony color	Pastell yellow (1034)
[Ref.: #69282]	Cultivation medium used	suter with tyrosine

[Ref.: #31480]	Pigment production	yes
[Ref.: #69282]	Pigment production	no
[Ref.: #69282]	Pigment name	Melanin
[Ref.: #69282]	Pigment production	no
[Ref.: #69282]	Pigment name	soluble pigment

[Ref.: #69282]	Multicellular complex forming ability	yes
[Ref.: #69282]	Multicellular complex name	Aerial mycelium
[Ref.: #69282]	Multicellular complex color	Light ivory (1015)
[Ref.: #69282]	Medium Name (multicellularity)	ISP 2

[Ref.: #69282]	Multicellular complex forming ability	yes
[Ref.: #69282]	Multicellular complex name	Aerial mycelium
[Ref.: #69282]	Multicellular complex color	Pure white (9010)
[Ref.: #69282]	Medium Name (multicellularity)	ISP 3

[Ref.: #69282]	Multicellular complex forming ability	yes
[Ref.: #69282]	Multicellular complex name	Aerial mycelium
[Ref.: #69282]	Multicellular complex color	Pure white (9010)
[Ref.: #69282]	Medium Name (multicellularity)	ISP 4

[Ref.: #69282]	Multicellular complex forming ability	yes
[Ref.: #69282]	Multicellular complex name	Aerial mycelium
[Ref.: #69282]	Multicellular complex color	Cream (9001)
[Ref.: #69282]	Medium Name (multicellularity)	ISP 5

[Ref.: #69282]	Multicellular complex forming ability	yes
[Ref.: #69282]	Multicellular complex name	Aerial mycelium
[Ref.: #69282]	Multicellular complex color	Cream (9001)
[Ref.: #69282]	Medium Name (multicellularity)	ISP 6

[Ref.: #69282]	Multicellular complex forming ability	yes
[Ref.: #69282]	Multicellular complex name	Aerial mycelium
[Ref.: #69282]	Multicellular complex color	Pure white (9010)
[Ref.: #69282]	Medium Name (multicellularity)	ISP 7

[Ref.: #69282]	Multicellular complex forming ability	no
[Ref.: #69282]	Multicellular complex name	Aerial mycelium
[Ref.: #69282]	Medium Name (multicellularity)	suter with tyrosine

[Ref.: #69282]	Multicellular complex forming ability	no
[Ref.: #69282]	Multicellular complex name	Aerial mycelium
[Ref.: #69282]	Medium Name (multicellularity)	suter without tyrosine

Multimedia content

[Ref.: #69282]

Caption:

Plates (65, ISP2, ISP3, ISP4, ISP5, ISP7)

[Ref.: #69282]

Intellectual property rights:

Helmholtz-Zentrum für Infektionsforschung GmbH

[Ref.: #69282]

Caption:

Plates (65, ISP2, ISP3, ISP4, ISP5, ISP7)

[Ref.: #69282]

Intellectual property rights:

Helmholtz-Zentrum für Infektionsforschung GmbH

[Ref.: #69282]

Caption:

(ISP6, ISP7, SSM+T, SSM-T)

[Ref.: #69282]

Intellectual property rights:

Helmholtz-Zentrum für Infektionsforschung GmbH

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7126]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #7126]

Culture medium growth

[Ref.: #7126]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7126]

Culture medium composition

expand / minimize

[Ref.: #40087]

Culture medium

MEDIUM 115 - for Nocardia otitidiscaviarum and Nocardia diaphanozonaria

[Ref.: #40087]

Culture medium growth

[Ref.: #40087]

Culture medium composition

expand / minimize

[Ref.: #120349]

Culture medium

CIP Medium 115

[Ref.: #120349]

Culture medium growth

[Ref.: #120349]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #7126]	growth	28 °C
[Ref.: #31480]	growth	17-37 °C
[Ref.: #31480]	optimum	27 °C
[Ref.: #40087]	growth	30 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #7126]	Temperature range	mesophilic
[Ref.: #31480]	Temperature range	mesophilic
[Ref.: #40087]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #31480]			optimum	6.5
[Ref.: #31480]			growth	3.5-9.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #7126]	Oxygen tolerance	aerobe
[Ref.: #31480]	Oxygen tolerance	aerobe
[Ref.: #120349]	Oxygen tolerance	obligate aerobe

[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %92.706

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #69282]		NaCl		growth	0-5	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68371]	amygdalin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #31480]	arabinose ChEBI	+	carbon source
[Ref.: #69282]	arabinose ChEBI	+/-	growth
[Ref.: #68371]	arbutin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #31480]	cellobiose ChEBI	+	carbon source
[Ref.: #68371]	cellobiose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #69282]	cellulose ChEBI	-	growth
[Ref.: #68371]	D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fructose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-galactose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-glucose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68379]	D-glucose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68371]	D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannitol ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68379]	D-mannitol ChEBI	-	fermentation	* from API Coryne
[Ref.: #68371]	D-mannose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-ribose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68379]	D-ribose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68371]	D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-tagatose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-xylose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68379]	D-xylose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	esculin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68379]	esculin ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #31480]	fructose ChEBI	+	carbon source
[Ref.: #69282]	fructose ChEBI	+/-	growth
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #31480]	galactose ChEBI	+	carbon source
[Ref.: #68379]	gelatin ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #68371]	gentiobiose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #31480]	glucose ChEBI	+	carbon source
[Ref.: #69282]	glucose ChEBI	+	growth
[Ref.: #31480]	glycerol ChEBI	+	carbon source
[Ref.: #68371]	glycerol ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycogen ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #69282]	inositol ChEBI	+/-	growth
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabinose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #31480]	lactose ChEBI	+	carbon source
[Ref.: #68371]	lactose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68379]	lactose ChEBI	-	fermentation	* from API Coryne
[Ref.: #31480]	maltose ChEBI	+	carbon source
[Ref.: #68371]	maltose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68379]	maltose ChEBI	-	fermentation	* from API Coryne
[Ref.: #31480]	mannose ChEBI	+	carbon source
[Ref.: #69282]	mannose ChEBI	+	growth
[Ref.: #68371]	melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melibiose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-glucopyranoside ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #31480]	myo-inositol ChEBI	+	carbon source
[Ref.: #68371]	myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	N-acetylglucosamine ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #120349]	nitrate ChEBI	+	reduction
[Ref.: #68379]	nitrate ChEBI	-	reduction	* from API Coryne
[Ref.: #120349]	nitrite ChEBI	-	reduction
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	Potassium 5-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #31480]	raffinose ChEBI	+	carbon source
[Ref.: #69282]	raffinose ChEBI	-	growth
[Ref.: #68371]	raffinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #69282]	rhamnose ChEBI	-	growth
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #31480]	ribose ChEBI	+	carbon source
[Ref.: #68371]	salicin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	starch ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #31480]	sucrose ChEBI	+	carbon source
[Ref.: #69282]	sucrose ChEBI	+/-	growth
[Ref.: #68371]	sucrose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68379]	sucrose ChEBI	-	fermentation	* from API Coryne
[Ref.: #31480]	trehalose ChEBI	+	carbon source
[Ref.: #68371]	trehalose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	turanose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68379]	urea ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #31480]	xylose ChEBI	+	carbon source
[Ref.: #69282]	xylose ChEBI	+	growth
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #120349]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #120349]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68379]	alkaline phosphatase	-	3.1.3.1	* from API Coryne, API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68379]	alpha-glucosidase	-	3.2.1.20	* from API Coryne
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68379]	beta-galactosidase	-	3.2.1.23	* from API Coryne, API zym
[Ref.: #68379]	beta-glucosidase	-	3.2.1.21	* from API Coryne
[Ref.: #68379]	beta-glucuronidase	-	3.2.1.31	* from API Coryne, API zym
[Ref.: #31480]	catalase	+	1.11.1.6
[Ref.: #120349]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68379]	gelatinase	-		* from API Coryne
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #120349]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68379]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API Coryne, API zym
[Ref.: #120349]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #120349]	oxidase	-
[Ref.: #68379]	pyrazinamidase	-	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API Coryne
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #120349]	urease	-	3.5.1.5
[Ref.: #68379]	urease	-	3.5.1.5	* from API Coryne
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #120349]	11448	not determinedn.d.	+	-	-	+	+	+	-	-	-	+	+	+	+	-	-	-	-	+	-	+/-	+	+	+	+	+	+	+	+	+	+	+	+	-	-	-	-	-	-	+	+	-	+	-	-	-	-	+/-	-	-

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #69282]	3776	-	-	-	-	-	-	-	-	-	-	-	not determinedn.d.	-	-	-	-	-	-	-	-	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #69282]	5960	not determinedn.d.	-	+/-	+	-	+/-	-	-	-	-	+/-	+/-	-	-	-	-	+/-	-	-	-
[Ref.: #120349]	11613	-	-	+	+	-	-	-	-	-	-	+	+	-	-	-	+	+	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7126]	Sample type/isolated from	the rhizosphere of goose-grass (Eleusine indica)
[Ref.: #7126]	Host species	Eleusine indica
[Ref.: #7126]	Geographic location (country and/or sea, region)	Jiangxi Province, Wushan
[Ref.: #7126]	Country	China
[Ref.: #7126]	Country ISO 3 Code	CHN
[Ref.: #7126]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Rhizosphere soil (about pH 3.5) of goose-grass (Eleusine indica) growing next to a copper mine
[Ref.: #67770]	Host species	Eleusine indica
[Ref.: #67770]	Geographic location (country and/or sea, region)	Wushan, Jiangxi Province
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia

[Ref.: #120349]	Sample type/isolated from	Environment, Rhizosphere soil
[Ref.: #120349]	Geographic location (country and/or sea, region)	Wushan, Jiangxi
[Ref.: #120349]	Country	China
[Ref.: #120349]	Country ISO 3 Code	CHN
[Ref.: #120349]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Rhizosphere

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence GQ376175 (>99% sequence identity) for Nocardia from Microbeatlas

Aquatic Samples	38
Soil Samples	345
Animal Samples	81
Plant Samples	42
Total Samples	506

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7126]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #120349]	Biosafety level	2	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7126]	Nocardia jiangxiensis strain 43401 16S ribosomal RNA gene, partial sequence	AY639902	1409	ENA	282685 tax ID
[Ref.: #20218]	Nocardia jiangxiensis 16S ribosomal RNA gene, partial sequence	GQ376175	1439	ENA	282685 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Nocardia jiangxiensis NBRC 101359	GCA_000308615	contig	GenBank	1206731 tax ID
[Ref.: #66792]	Nocardia jiangxiensis NBRC 101359	1206731.4	wgs	PATRIC	1206731 tax ID	*
[Ref.: #66792]	Nocardia jiangxiensis NBRC 101359	2563367078	draft	JGI IMG/M	1206731 tax ID	*

[Ref.: #67770]

GC-content

66.8 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Nocardia jiangxiensis NBRC 101359 PATRIC: 1206731.4
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Nocardia jiangxiensis NBRC 101359 PATRIC: 1206731.4
[Ref.: #69480]	motile	no	95.347	yes
[Ref.: #69480]	gram-positive	yes	85.116	yes
[Ref.: #69480]	anaerobic	no	98.918	no
[Ref.: #69480]	aerobic	yes	85.24	no
[Ref.: #69480]	halophile	no	95.143	no
[Ref.: #69480]	spore-forming	yes	75.677	no
[Ref.: #69480]	glucose-util	yes	87.952	no
[Ref.: #69480]	flagellated	no	98.416	yes
[Ref.: #69480]	thermophile	no	98.96	no
[Ref.: #69480]	glucose-ferment	no	90.656	no

Availability in culture collections External links

[Ref.: #7126]

Culture collection no.

DSM 17684, AS 4.1905, CGMCC 4.1905, IFM 10633, JCM 12861, CIP 109010, NBRC 101359

[Ref.: #80067]

SI-ID 265616

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Nocardia albiluteola sp. nov., a novel lignin-degrading actinobacterium isolated from rhizosphere soil of pumpkin.	Shan Q, Han C, Zhao J, Yu B, Jiang M, Liu T, Wang X, Xiang W	Int J Syst Evol Microbiol	10.1099/ijsem.0.005305	2022	*
Phylogeny	Nocardia coffeae sp. nov., an endophytic actinobacterium isolated from the root of Coffea arabica (L.).	Nammali A, Duangupama T, Suriyachadkun C, Tanasupawat S, Thawai C	Int J Syst Evol Microbiol	10.1099/ijsem.0.005180	2022	*
Phylogeny	Nocardia zhihengii sp. nov., an actinobacterium isolated from rhizosphere soil of Psammosilene tunicoides.	Huang MJ, Xiao M, Rao MPN, Cheng T, Yang YY, Alkhalifah DHM, Hozzein WN, Huang HQ, Li WJ	Antonie Van Leeuwenhoek	10.1007/s10482-018-1107-8	2018	*
Phylogeny	Nocardia rayongensis sp. nov., isolated from Thai peat swamp forest soil.	Tanasupawat S, Phongsopitanun W, Suwanborirux K, Ohkuma M, Kudo T	Int J Syst Evol Microbiol	10.1099/ijsem.0.000971	2016	*
Phylogeny	Nocardia jiangxiensis sp. nov. and Nocardia miyunensis sp. nov., isolated from acidic soils.	Cui Q, Wang L, Huang Y, Liu Z, Goodfellow M	Int J Syst Evol Microbiol	10.1099/ijs.0.63644-0	2005	*

References

#7126

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17684

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#31480

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27778 (see below)

#40087 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68371

Automatically annotated from API 50CH acid .

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#69282

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#80067

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID265616.1 )

#120349 Collection of Institut Pasteur ; Curators of the CIP; CIP 109010

#27778

IJSEM 1921 2005 ( DOI 10.1099/ijs.0.63644-0 , PubMed 16166688 )

* These data were automatically processed and therefore are not curated

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Nocardia jiangxiensis NBRC 101359

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