Nocardia pneumoniae (DSM 44730, IFM 0784, JCM 12119)

Name: Nocardia pneumoniae (DSM 44730, IFM 0784, JCM 12119)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 10787

Type strain

Culture col. no. DSM 44730 IFM 0784 JCM 12119 NBRC 100136 CIP 108644

NCBI tax ID(s) 1206737 228601

Special Collections DSMZ JCM CIP Wink compendium Literature strains

History <- Y. Mikami, IFM Y. Mikami IFM 0784. CIP <- 2005, JCM <- 2003, IFM

Links

Nocardia pneumoniae DSM 44730 is an aerobe, mesophilic, Gram-positive prokaryote that was isolated from human.

Gram-positive rod-shaped aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 131105

DSM 44730,JCM 12119,NBRC 100136,CIP 108644

@ref 20215

Last LPSN update 2026-02-09 11:20:21

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Nocardiaceae

Genus Nocardia

Species Nocardia pneumoniae

Full scientific name Nocardia pneumoniae Kageyama et al. 2004

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Confidence
31219	positive	0.4 µm	0.33 µm	rod-shaped
121894	positive			rod-shaped
125438	positive				90.054
125439	positive				99.2

Colony morphology

@ref	Colony color	Incubation period	Medium used
19698	Beige	10-14 days	ISP 2
19698	Beige	10-14 days	ISP 3
19698		10-14 days	ISP 4
19698		10-14 days	ISP 5
19698		10-14 days	ISP 6
19698	Beige	10-14 days	ISP 7
121894

Multicellular morphology

@ref	Forms multicellular complex	Medium name
19698		ISP 2
19698		ISP 3
19698		ISP 4
19698		ISP 5
19698		ISP 6
19698		ISP 7

Pigmentation

31219

Productionno

Multimedia

@ref:	12048
multimedia content:	DSM_44730.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_44730.jpg
caption:	Medium 535 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
12048	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)	Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
19698	ISP 2		Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes
19698	ISP 3		Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms:
19698	ISP 4		Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml
19698	ISP 5		Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes
19698	ISP 6		Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes
19698	ISP 7		Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes
40047	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
121894	CIP Medium 72	Medium recipe at CIP
121894	CIP Medium 112	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
12048	positive	growth	28	mesophilic
19698	positive	optimum	28	mesophilic
40047	positive	growth	30	mesophilic
67770	positive	growth	28	mesophilic
121894	positive	growth	10-37
121894	negative	growth	41
121894	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
31219	aerobe
121894	obligate aerobe
125439	obligate aerobe	99.3

Halophily

@ref	Salt	Growth	Tested relation	Concentration
121894	NaCl	positive	growth	0-2 %
121894	NaCl		growth	4 %
121894	NaCl		growth	6 %
121894	NaCl		growth	8 %
121894	NaCl		growth	10 %

Observation

67770

Observationquinones: MK-8(H₄, ω-cycl)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
31219	30089 ChEBI	acetate	+	carbon source
19698	22599 ChEBI	arabinose	-
19698	62968 ChEBI	cellulose	+/-
31219	16947 ChEBI	citrate	+	carbon source
121894	16947 ChEBI	citrate	-	carbon source
31219	4853 ChEBI	esculin	+	hydrolysis
121894	4853 ChEBI	esculin	+	hydrolysis
19698	28757 ChEBI	fructose	+
68379	5291 ChEBI	gelatin	+	hydrolysis	from API Coryne
19698	17234 ChEBI	glucose	+
31219	17234 ChEBI	glucose	+	carbon source
121894	606565 ChEBI	hippurate	+	hydrolysis
19698	29864 ChEBI	mannitol	-
19698	17268 ChEBI	myo-inositol	-
31219	17632 ChEBI	nitrate	+	reduction
121894	17632 ChEBI	nitrate	+	reduction
121894	17632 ChEBI	nitrate	-	respiration
121894	16301 ChEBI	nitrite	-	reduction
19698	16634 ChEBI	raffinose	-
19698	26546 ChEBI	rhamnose	+/-
19698	17992 ChEBI	sucrose	+
68379	17992 ChEBI	sucrose	-	fermentation	from API Coryne
68379	16199 ChEBI	urea	+	hydrolysis	from API Coryne
19698	18222 ChEBI	xylose	-

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
121894	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
121894	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
121894	15688 ChEBI	acetoin	-
121894	17234 ChEBI	glucose		-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
121894	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68379	alkaline phosphatase	+	3.1.3.1	from API Coryne
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68379	alpha-glucosidase	+	3.2.1.20	from API Coryne
68382	alpha-mannosidase	-	3.2.1.24	from API zym
121894	amylase	-
31219	arylsulfatase	+	3.1.6.1
121894	beta-galactosidase	+	3.2.1.23
68379	beta-galactosidase	-	3.2.1.23	from API Coryne
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
121894	caseinase	-	3.4.21.50
121894	catalase	+	1.11.1.6
121894	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
121894	gamma-glutamyltransferase	-	2.3.2.2
121894	gelatinase	+
68379	gelatinase	+		from API Coryne
121894	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
121894	lipase	-
68382	lipase (C 14)	-		from API zym
121894	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API Coryne
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
121894	ornithine decarboxylase	-	4.1.1.17
121894	oxidase	-
121894	phenylalanine ammonia-lyase	-	4.3.1.24
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
68379	pyrrolidonyl arylamidase	-	3.4.19.3	from API Coryne
68382	trypsin	+	3.4.21.4	from API zym
121894	tryptophan deaminase	-
121894	tween esterase	-
121894	urease	-	3.5.1.5
68379	urease	+	3.5.1.5	from API Coryne

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
19698	not determinedn.d.	-	-	+	-	-	+	-	+/-	+	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	-	not determinedn.d.	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
19698	not determinedn.d.	+	+	+	-	+	+	+	+	-	+	+	-	-	-	+	+	-	-	-
121894	-	+	+	+	-	+	-	-	+	-	+	+	-	+	-	+	+	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
121894	not determinedn.d.	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	+	+	+	-	-	-	-	-	-	-	+	-	+	-	-	-	-	+	+	+	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Host	#Human

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
12048	human	Japan	JPN	Asia
67770	Sputum	Japan	JPN	Asia
121894	Human, Sputum	Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence GQ853075 (>99% sequence identity) for Nocardia from Microbeatlas

Aquatic Samples	3
Soil Samples	5
Animal Samples	1
Plant Samples	1
Total Samples	10

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Biosafety level	Biosafety level comment
12048	yes, in single cases	1	Risk group (German classification) According to TRBA 466
121894		2	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM30875v1 assembly for Nocardia pneumoniae NBRC 100136	contig	GCA_000308755	1206737.4	2551306160	1206737	46.81

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Nocardia pneumoniae strain DSM 44730 isolate VNS40 16S ribosomal RNA gene, partial sequence	AY903622	606	228601
20218	Nocardia pneumoniae strain DSM 44730 16S ribosomal RNA gene, partial sequence	JF797313	1414	228601
20218	Nocardia pneumoniae strain DSM 44730 16S ribosomal RNA gene, partial sequence	JN041465	462	228601
20218	Nocardia pneumoniae strain W9813 16S ribosomal RNA gene, partial sequence	GQ853075	1441	228601
31219	Nocardia pneumoniae gene for 16S rRNA, partial sequence	AB108780	1453	228601

GC content

@ref	GC-content (mol%)	Method
31219	68
67770	68.1	genome sequence analysis
67770	68	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Nocardia pneumoniae NBRC 100136
NCBI: GCA_000308755

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	76.70	no
125439	motility	BacteriaNetⓘ	no	89.10	no
125439	gram_stain	BacteriaNetⓘ	positive	99.20	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.30	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Nocardia pneumoniae NBRC 100136
PATRIC: 1206737.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	90.05	yes
125438	anaerobic	anaerobicⓘ	no	96.90	yes
125438	spore-forming	spore-formingⓘ	yes	62.92	no
125438	aerobic	aerobicⓘ	yes	89.74	yes
125438	thermophilic	thermophileⓘ	no	96.00	yes
125438	flagellated	motile2+ⓘ	no	89.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Discovery and Characterization of the Fully Decorated Nocardiosis-Associated Polyketide Natural Product.	Kishore S, Del Rio Flores A, Lynch SR, Yuet KP, Khosla C.	J Am Chem Soc	10.1021/jacs.3c13670	2024
Enzymology	Evaluation of the integrated database network system (IDNS) SmartGene software for analysis of 16S rRNA gene sequences for identification of Nocardia species.	Conville PS, Murray PR, Zelazny AM.	J Clin Microbiol	10.1128/jcm.00681-10	2010
	Pulmonary Nocardiosis in a Patient With COPD and Bronchiectasis.	Mira Palomino C, Babiano Nodal M, Raboso Moreno B.	Open Respir Arch	10.1016/j.opresp.2025.100485	2025
	Pathogenic Nocardia amamiensis infection: A rare case report and literature review.	Zhang J, Zhu Y, Sun Y, Han X, Mao Y.	Heliyon	10.1016/j.heliyon.2023.e17183	2023
	Clinical features and outcomes of persons with cystic fibrosis and nocardia isolation: a systematic review.	Terlizzi V, Ballerini T, Castaldo A, Dolce D, Campana S, Taccetti G, Chiappini E.	BMC Pulm Med	10.1186/s12890-024-03217-0	2024
	Identification of Nocardia and non-tuberculous Mycobacterium species by MALDI-TOF MS using the VITEK MS coupled to IVD and RUO databases.	Rodriguez-Temporal D, Zvezdanova ME, Benedi P, Marin M, Blazquez-Sanchez M, Ruiz-Serrano MJ, Munoz P, Rodriguez-Sanchez B.	Microb Biotechnol	10.1111/1751-7915.14146	2023
Pathogenicity	Retrospective Analysis of Antimicrobial Susceptibility Profiles of Nocardia Species from a Tertiary Hospital and Reference Laboratory, 2011 to 2017.	Hamdi AM, Fida M, Deml SM, Abu Saleh OM, Wengenack NL.	Antimicrob Agents Chemother	10.1128/aac.01868-19	2020
Phylogeny	Clinical significance, antimicrobial susceptibility and molecular identification of Nocardia species isolated from children with cystic fibrosis.	Betran A, Villuendas MC, Rezusta A, Pereira J, Revillo MJ, Rodriguez-Nava V.	Braz J Microbiol	10.1016/j.bjm.2016.01.029	2016
Genetics	Respiratory Bacterial Microbiota and Individual Bacterial Variability in Lung Cancer and Bronchiectasis Patients.	Ekanayake A, Madegedara D, Chandrasekharan V, Magana-Arachchi D.	Indian J Microbiol	10.1007/s12088-019-00850-w	2020
Phylogeny	Detection and characterization of nocardia from patients diagnosed as tuberculosis in egypt.	Helal ZH, Khan MI, Ashour MS, Eissa SA.	Int J Biomed Sci		2008
Phylogeny	Evaluation of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Identification of Mycobacterium species, Nocardia species, and Other Aerobic Actinomycetes.	Buckwalter SP, Olson SL, Connelly BJ, Lucas BC, Rodning AA, Walchak RC, Deml SM, Wohlfiel SL, Wengenack NL.	J Clin Microbiol	10.1128/jcm.02128-15	2016
	Nocardia arthritidis as a cause of disseminated nocardiosis in a patient with chronic lymphocytic leukemia.	Roberts AL, Davidson RM, Freifeld AG, Iwen PC.	IDCases	10.1016/j.idcr.2016.09.015	2016
Metabolism	Diversity and antimicrobial activities of actinobacteria isolated from tropical mangrove sediments in Malaysia.	Lee LH, Zainal N, Azman AS, Eng SK, Goh BH, Yin WF, Ab Mutalib NS, Chan KG.	ScientificWorldJournal	10.1155/2014/698178	2014
Phylogeny	Nocardia amamiensis sp. nov., isolated from a sugar-cane field in Japan.	Yamamura H, Tamura T, Sakiyama Y, Harayama S.	Int J Syst Evol Microbiol	10.1099/ijs.0.64829-0	2007
Phylogeny	Nocardia niwae sp. nov., isolated from human pulmonary sources.	Moser BD, Klenk HP, Schumann P, Potter G, Lasker BA, Steigerwalt AG, Hinrikson HP, Brown JM	Int J Syst Evol Microbiol	10.1099/ijs.0.020370-0	2010
Phylogeny	Nocardia araoensis sp. nov. and Nocardia pneumoniae sp. nov., isolated from patients in Japan.	Kageyama A, Yazawa K, Mukai A, Kohara T, Nishimura K, Kroppenstedt RM, Mikami Y	Int J Syst Evol Microbiol	10.1099/ijs.0.63074-0	2004

References

#12048	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44730
#19698	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#27545	IJSEM 2025 2004 ( DOI 10.1099/ijs.0.63074-0 , PubMed 15545428 )
#31219	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27545
#40047	; Curators of the CIP;
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#121894	Collection of Institut Pasteur ; Curators of the CIP; CIP 108644
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Nocardia pneumoniae (DSM 44730, IFM 0784, JCM 12119)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Multicellular morphology

Pigmentation

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Halophily

Observation

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

API coryne

API zym

API biotype100

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000308755

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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