Name: Nocardia neocaledoniensis SBHROA6
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 10774

Type strain:

Species: Nocardia neocaledoniensis

Strain Designation: SBHROA6, SBH_ROA6

Culture col. no.: DSM 44717, NCIMB 13955, JCM 12604, CIP 108429, IFM 10560, NBRC 108232

Strain history: CIP <- 2004, NCIMB <- L.A. Maldonado, UK: strain SBHROA6 <- D. Saintpierre-Bonaccio, Nouméa, New Caledonia, France

NCBI tax ID(s): 1210080 (strain), 236511 (species)

SI-ID 131427

DSM 44717, NCIMB 13955, JCM 12604, CIP 108429

Section

Nocardia neocaledoniensis SBHROA6 is an aerobe, spore-forming, mesophilic human pathogen that builds an aerial mycelium and was isolated from soil.

Gram-positive
rod-shaped
spore-forming
aerobe
human pathogen
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Nocardiaceae*
	Genus	*Nocardia*
	Species	**Nocardia neocaledoniensis**
	Full Scientific Name (LPSN)	Nocardia neocaledoniensis Saintpierre-Bonaccio et al. 2004

Information on morphological and physiological properties Morphology

[Ref.: #30048]	Gram stain	positive
[Ref.: #121267]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #30048]	Cell shape	rod-shaped
[Ref.: #121267]	Cell shape	rod-shaped

[Ref.: #30048]	Motility	no
[Ref.: #121267]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %94.688

[Ref.: #19695]	Colony color	Pastel yellow
[Ref.: #19695]	Incubation period	10-14 days
[Ref.: #19695]	Cultivation medium used	ISP 2

[Ref.: #19695]	Colony color	Beige
[Ref.: #19695]	Incubation period	10-14 days
[Ref.: #19695]	Cultivation medium used	ISP 3

[Ref.: #19695]	Colony color	Ivory
[Ref.: #19695]	Incubation period	10-14 days
[Ref.: #19695]	Cultivation medium used	ISP 5

[Ref.: #19695]	Colony color	Beige
[Ref.: #19695]	Incubation period	10-14 days
[Ref.: #19695]	Cultivation medium used	ISP 6

[Ref.: #19695]	Colony color	Tomato red
[Ref.: #19695]	Incubation period	10-14 days
[Ref.: #19695]	Cultivation medium used	ISP 7

[Ref.: #19695]	Incubation period	10-14 days
[Ref.: #19695]	Cultivation medium used	ISP 4

[Ref.: #30048]

Pigment production

yes

[Ref.: #19695]	Multicellular complex forming ability	yes
[Ref.: #19695]	Multicellular complex name	Aerial Mycelium
[Ref.: #19695]	Multicellular complex color	White
[Ref.: #19695]	Medium Name (multicellularity)	ISP 2

[Ref.: #19695]	Multicellular complex forming ability	no
[Ref.: #19695]	Medium Name (multicellularity)	ISP 3

[Ref.: #19695]	Multicellular complex forming ability	no
[Ref.: #19695]	Medium Name (multicellularity)	ISP 4

[Ref.: #19695]	Multicellular complex forming ability	yes
[Ref.: #19695]	Multicellular complex name	Aerial Mycelium
[Ref.: #19695]	Multicellular complex color	Ivory
[Ref.: #19695]	Medium Name (multicellularity)	ISP 5

[Ref.: #19695]	Multicellular complex forming ability	no
[Ref.: #19695]	Medium Name (multicellularity)	ISP 6

[Ref.: #19695]	Multicellular complex forming ability	yes
[Ref.: #19695]	Multicellular complex name	Aerial Mycelium
[Ref.: #19695]	Multicellular complex color	Beige
[Ref.: #19695]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #12036]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #12036]

Culture medium growth

[Ref.: #12036]

Culture medium link

Medium recipe at MediaDive

[Ref.: #12036]

Culture medium composition

expand / minimize

[Ref.: #19695]

Culture medium

ISP 2

[Ref.: #19695]

Culture medium growth

[Ref.: #19695]

Culture medium composition

expand / minimize

[Ref.: #19695]

Culture medium

ISP 3

[Ref.: #19695]

Culture medium growth

[Ref.: #19695]

Culture medium composition

expand / minimize

[Ref.: #19695]

Culture medium

ISP 4

[Ref.: #19695]

Culture medium growth

[Ref.: #19695]

Culture medium composition

expand / minimize

[Ref.: #19695]

Culture medium

ISP 5

[Ref.: #19695]

Culture medium growth

[Ref.: #19695]

Culture medium composition

expand / minimize

[Ref.: #19695]

Culture medium

ISP 6

[Ref.: #19695]

Culture medium growth

[Ref.: #19695]

Culture medium composition

expand / minimize

[Ref.: #19695]

Culture medium

ISP 7

[Ref.: #19695]

Culture medium growth

[Ref.: #19695]

Culture medium composition

expand / minimize

[Ref.: #36732]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #36732]

Culture medium growth

[Ref.: #36732]

Culture medium composition

expand / minimize

[Ref.: #121267]

Culture medium

CIP Medium 72

[Ref.: #121267]

Culture medium growth

[Ref.: #121267]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #12036]		growth	28-30 °C
[Ref.: #19695]		optimum	28 °C
[Ref.: #30048]		growth	10-45 °C
[Ref.: #30048]		optimum	27.5 °C
[Ref.: #36732]		growth	30 °C
[Ref.: #67770]		growth	28 °C
[Ref.: #121267]		growth	25-41 °C
[Ref.: #121267]	no	growth	10 °C
[Ref.: #121267]	no	growth	45 °C

[Ref.: #12036]	Temperature range	mesophilic
[Ref.: #19695]	Temperature range	mesophilic
[Ref.: #30048]	Temperature range	mesophilic
[Ref.: #36732]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #121267]	Temperature range	psychrophilic
[Ref.: #121267]	Temperature range	thermophilic

	pH	Kind of pH		pH
[Ref.: #30048]			optimum	8
[Ref.: #30048]			growth	04-12

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30048]	Oxygen tolerance	aerobe
[Ref.: #121267]	Oxygen tolerance	obligate aerobe

[Ref.: #69481]	Ability of spore formation	yes Confidence in %93
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.111

	Salt	Tested relation		Salt conc.
[Ref.: #121267]	NaCl		growth	0-4	%
[Ref.: #121267]	NaCl	no	growth	6	%
[Ref.: #121267]	NaCl	no	growth	8	%
[Ref.: #121267]	NaCl	no	growth	10	%

[Ref.: #67770]

Observation

quinones: MK-8(H₆, ω-cycl)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #19695]	arabinose ChEBI	-
[Ref.: #19695]	cellulose ChEBI	-
[Ref.: #121267]	citrate ChEBI	-	carbon source
[Ref.: #30048]	esculin ChEBI	+	hydrolysis
[Ref.: #121267]	esculin ChEBI	+	hydrolysis
[Ref.: #68379]	esculin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #19695]	fructose ChEBI	+
[Ref.: #30048]	fructose ChEBI	+	carbon source
[Ref.: #68379]	gelatin ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #19695]	glucose ChEBI	+
[Ref.: #121267]	hippurate ChEBI	-	hydrolysis
[Ref.: #19695]	mannitol ChEBI	+
[Ref.: #30048]	mannitol ChEBI	+	carbon source
[Ref.: #30048]	mannose ChEBI	+	carbon source
[Ref.: #19695]	myo-inositol ChEBI	-
[Ref.: #121267]	nitrate ChEBI	+	reduction
[Ref.: #121267]	nitrate ChEBI	-	respiration
[Ref.: #121267]	nitrite ChEBI	-	reduction
[Ref.: #19695]	raffinose ChEBI	-
[Ref.: #30048]	raffinose ChEBI	+	carbon source
[Ref.: #19695]	rhamnose ChEBI	-
[Ref.: #19695]	sucrose ChEBI	-
[Ref.: #68379]	sucrose ChEBI	+	fermentation	* from API Coryne
[Ref.: #30048]	trehalose ChEBI	+	carbon source
[Ref.: #30048]	tween 80 ChEBI	+	carbon source
[Ref.: #30048]	urea ChEBI	+	carbon source
[Ref.: #68379]	urea ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #19695]	xylose ChEBI	-
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #121267]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	yes	no

	Metabolite production	Metabolite	Production
[Ref.: #121267]		indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #121267]		acetoin ChEBI	-
[Ref.: #121267]		glucose ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #121267]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68379]	alkaline phosphatase	+	3.1.3.1	* from API Coryne, API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68379]	alpha-glucosidase	+	3.2.1.20	* from API Coryne, API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #121267]	amylase	-
[Ref.: #121267]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym
[Ref.: #68379]	beta-galactosidase	-	3.2.1.23	* from API Coryne
[Ref.: #68379]	beta-glucosidase	+	3.2.1.21	* from API Coryne, API zym
[Ref.: #68379]	beta-glucuronidase	-	3.2.1.31	* from API Coryne, API zym
[Ref.: #121267]	caseinase	-	3.4.21.50
[Ref.: #30048]	catalase	+	1.11.1.6
[Ref.: #121267]	catalase	+	1.11.1.6
[Ref.: #121267]	DNase	-
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #121267]	gamma-glutamyltransferase	+	2.3.2.2
[Ref.: #121267]	gelatinase	-
[Ref.: #68379]	gelatinase	-		* from API Coryne
[Ref.: #121267]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #121267]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #121267]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68379]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API Coryne, API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #121267]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #121267]	oxidase	-
[Ref.: #121267]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #68379]	pyrazinamidase	+	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API Coryne
[Ref.: #121267]	tryptophan deaminase	-
[Ref.: #121267]	tween esterase	-
[Ref.: #121267]	urease	+	3.5.1.5
[Ref.: #68379]	urease	+	3.5.1.5	* from API Coryne
	Only first 10 entries are displayed. Click here to see all.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #121267]	2747	not determinedn.d.	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	+	-	-	-	-	-	-	-	+	+	-	-	+	-	-	+	+	+	-	-	+	-	-	-	+	-	+	+	-	+	-	+	-	-	-	-	-	+	+	+	+	+	+	-	-	-	+	+	+	+	-	+	-	+	-	+	-	+	+	-	-	-	+	+	+	+

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #19695]	253	not determinedn.d.	+	-	+	-	-	+	-	+	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	+	not determinedn.d.	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #19695]	520	not determinedn.d.	+	+	+	-	+	+	+	+	-	+	+	-	+	-	+	+	-	-	-
[Ref.: #121267]	11180	-	+	+	+	-	+	-	-	-	-	+	+	-	+	-	+	+	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #12036]	Sample type/isolated from	soil
[Ref.: #12036]	Geographic location (country and/or sea, region)	New Caledonia

[Ref.: #67770]	Sample type/isolated from	Brown hypermagnesian ultramafic soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	New Caledonia
[Ref.: #67770]	Country	French Overseas
[Ref.: #67770]	Country ISO 3 Code	FRA

[Ref.: #121267]	Sample type/isolated from	Environment, Soil
[Ref.: #121267]	Geographic location (country and/or sea, region)	New Caledonia
[Ref.: #121267]	Country	France
[Ref.: #121267]	Country ISO 3 Code	FRA
[Ref.: #121267]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JF797311 (>99% sequence identity) for Nocardia from Microbeatlas

Aquatic Samples	84
Soil Samples	198
Animal Samples	206
Plant Samples	54
Total Samples	542

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #12036]	Pathogenicity (human)	yes, in single cases
[Ref.: #12036]	Pathogenicity (animal)	yes, in single cases
[Ref.: #12036]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #19695]	Biosafety level	1	Risk group (German classification)
[Ref.: #121267]	Biosafety level	2	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #12036]	Nocardia neocaledonica 16S ribosomal RNA gene, partial sequence	AY282603	1474	ENA	236511 tax ID
[Ref.: #20218]	Nocardia neocaledoniensis strain W8372 16S ribosomal RNA gene, partial sequence	GQ853080	1441	ENA	236511 tax ID	*
[Ref.: #20218]	Nocardia neocaledoniensis strain DSM 44717 isolate VNS32 16S ribosomal RNA gene, partial sequence	AY903614	606	ENA	236511 tax ID	*
[Ref.: #20218]	Nocardia neocaledoniensis strain DSM 44717 16S ribosomal RNA gene, partial sequence	JF797311	1395	ENA	236511 tax ID	*
[Ref.: #20218]	Nocardia neocaledoniensis strain DSM 44717 16S ribosomal RNA gene, partial sequence	JN041458	462	ENA	236511 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Nocardia neocaledoniensis NBRC 108232	GCA_007990735	contig	GenBank	1210080 tax ID
[Ref.: #67770]	Nocardia neocaledoniensis DSM 44717	GCA_003182135	scaffold	GenBank	236511 tax ID
[Ref.: #66792]	Nocardia neocaledoniensis NBRC 108232	1210080.3	wgs	PATRIC	1210080 tax ID	*
[Ref.: #66792]	Nocardia neocaledoniensis strain DSM 44717	236511.3	wgs	PATRIC	236511 tax ID	*
[Ref.: #66792]	Nocardia neocaledoniensis DSM 44717	2770939500	draft	JGI IMG/M	236511 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Nocardia neocaledoniensis DSM 44717 NCBI: GCA_003182135.1
[Ref.: #69481]	spore-forming	yes	93	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Nocardia neocaledoniensis NBRC 108232 PATRIC: 1210080.3
[Ref.: #69480]	motile	no	92.832	yes
[Ref.: #69480]	gram-positive	yes	88.285	no
[Ref.: #69480]	anaerobic	no	99.456	yes
[Ref.: #69480]	aerobic	yes	91.869	yes
[Ref.: #69480]	halophile	no	88.858	no
[Ref.: #69480]	spore-forming	yes	81.976	no
[Ref.: #69480]	glucose-util	yes	90.351	yes
[Ref.: #69480]	flagellated	no	97.556	no
[Ref.: #69480]	thermophile	no	99.246	yes
[Ref.: #69480]	glucose-ferment	no	91.571	no

Availability in culture collections External links

[Ref.: #12036]

Culture collection no.

DSM 44717, NCIMB 13955, JCM 12604, CIP 108429, IFM 10560, NBRC 108232

[Ref.: #80040]

SI-ID 131427

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Nocardia rhizosphaerihabitans sp. nov., a novel actinomycete isolated from a coastal soil.	Ding P, Bai JL, Wang TT, Sun Y, Cao CL, Jiang JH, Qin S	Int J Syst Evol Microbiol	10.1099/ijsem.0.002481	2017	*
Phylogeny	Nocardia neocaledoniensis sp. nov., a novel actinomycete isolated from a New-Caledonian brown hypermagnesian ultramafic soil.	Saintpierre-Bonaccio D, Maldonado LA, Amir H, Pineau R, Goodfellow M	Int J Syst Evol Microbiol	10.1099/ijs.0.02881-0	2004	*

References

#12036

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44717

#19695

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#30048

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26409 (see below)

#36732 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#80040

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID131427.1 )

#121267 Collection of Institut Pasteur ; Curators of the CIP; CIP 108429

#26409

IJSEM 599 2004 ( DOI 10.1099/ijs.0.02881-0 , PubMed 15023981 )

* These data were automatically processed and therefore are not curated

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Search for species Nocardia neocaledoniensis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Nocardia neocaledoniensis DSM 44717

Nocardia neocaledoniensis NBRC 108232

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Change proposal