Nocardia tenerifensis GW 39-1573, GW39-1573T | Type strain | DSM 44704, CIP 107929, CCUG 49019, JCM 12693, IFM 10554, NBRC 101015 | BacDiveID:10773

Strain identifier

BacDive ID: 10773

Type strain:

Species: Nocardia tenerifensis

Strain Designation: GW 39-1573, GW39-1573T

Culture col. no.: DSM 44704, CIP 107929, CCUG 49019, JCM 12693, IFM 10554, NBRC 101015

Strain history: CIP <- 2003, P. Kämpfer, Giessen Univ., Giessen, Germany: strain GW39-1573T

NCBI tax ID(s): 1206736 (strain), 228006 (species)

SI-ID 131429

CIP 107929, DSM 44704, NBRC 101015, JCM 12693, CCUG 49019

Other strains from Nocardia tenerifensis

N. tenerifensis

Section

Nocardia tenerifensis GW 39-1573 is an obligate aerobe, mesophilic, Gram-positive bacterium that builds an aerial mycelium and was isolated from rhizosphere.

Gram-positive
rod-shaped
mesophilic
obligate aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Nocardiaceae*
	Genus	*Nocardia*
	Species	**Nocardia tenerifensis**
	Full Scientific Name (LPSN)	Nocardia tenerifensis Kämpfer et al. 2004

Information on morphological and physiological properties Morphology

[Ref.: #30022]	Gram stain	positive
[Ref.: #123443]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #30022]	Cell shape	rod-shaped
[Ref.: #123443]	Cell shape	rod-shaped

[Ref.: #123443]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %97.192

[Ref.: #20098]	Colony color	Yellow orange (2000)
[Ref.: #20098]	Incubation period	10-14 days
[Ref.: #20098]	Cultivation medium used	ISP 2

[Ref.: #20098]	Colony color	Ivory (1014)
[Ref.: #20098]	Incubation period	10-14 days
[Ref.: #20098]	Cultivation medium used	ISP 3

[Ref.: #20098]	Colony color	Ivory (1014)
[Ref.: #20098]	Incubation period	10-14 days
[Ref.: #20098]	Cultivation medium used	ISP 4

[Ref.: #20098]	Colony color	Nut brown (8011)
[Ref.: #20098]	Incubation period	10-14 days
[Ref.: #20098]	Cultivation medium used	ISP 5

[Ref.: #20098]	Colony color	Ivory (1014)
[Ref.: #20098]	Incubation period	10-14 days
[Ref.: #20098]	Cultivation medium used	ISP 6

[Ref.: #20098]	Colony color	Nut brown (8011)
[Ref.: #20098]	Incubation period	10-14 days
[Ref.: #20098]	Cultivation medium used	ISP 7

Pigment production

yes

[Ref.: #20098]	Multicellular complex forming ability	yes
[Ref.: #20098]	Multicellular complex name	Aerial Mycelium
[Ref.: #20098]	Multicellular complex color	White
[Ref.: #20098]	Medium Name (multicellularity)	ISP 2

[Ref.: #20098]	Multicellular complex forming ability	yes
[Ref.: #20098]	Multicellular complex name	Aerial Mycelium
[Ref.: #20098]	Multicellular complex color	White
[Ref.: #20098]	Medium Name (multicellularity)	ISP 3

[Ref.: #20098]	Multicellular complex forming ability	no
[Ref.: #20098]	Medium Name (multicellularity)	ISP 4

[Ref.: #20098]	Multicellular complex forming ability	no
[Ref.: #20098]	Medium Name (multicellularity)	ISP 5

[Ref.: #20098]	Multicellular complex forming ability	no
[Ref.: #20098]	Medium Name (multicellularity)	ISP 6

[Ref.: #20098]	Multicellular complex forming ability	no
[Ref.: #20098]	Medium Name (multicellularity)	ISP 7

Multimedia content

Caption:

Medium 535 28°C

Intellectual property rights:

© Leibniz-Institut DSMZ

Information on culture and growth conditions Culture and growth conditions

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

Culture medium growth

Culture medium link

Medium recipe at MediaDive

Culture medium composition

expand / minimize

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

Culture medium growth

Culture medium link

Medium recipe at MediaDive

Culture medium composition

expand / minimize

Culture medium

ISP 2

Culture medium growth

Culture medium composition

expand / minimize

Culture medium

ISP 3

Culture medium growth

Culture medium composition

expand / minimize

Culture medium

ISP 4

Culture medium growth

Culture medium composition

expand / minimize

Culture medium

ISP 5

Culture medium growth

Culture medium composition

expand / minimize

Culture medium

ISP 6

Culture medium growth

Culture medium composition

expand / minimize

Culture medium

ISP 7

Culture medium growth

Culture medium composition

expand / minimize

Culture medium

MEDIUM 57 - for Streptomyces, Nocardioides, Lentzea albidocapillata and Streptoverticillium reticulum

Culture medium growth

Culture medium composition

expand / minimize

[Ref.: #123443]

Culture medium

CIP Medium 57

[Ref.: #123443]

Culture medium growth

[Ref.: #123443]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #11895]			growth	28 °C
[Ref.: #20098]			optimum	28 °C
[Ref.: #30022]			growth	25-30 °C
[Ref.: #38239]			growth	25 °C
[Ref.: #67770]			growth	28 °C
[Ref.: #123443]			growth	25-41 °C
[Ref.: #123443]		no	growth	10 °C
[Ref.: #123443]		no	growth	45 °C

[Ref.: #11895]	Temperature range	mesophilic
[Ref.: #20098]	Temperature range	mesophilic
[Ref.: #30022]	Temperature range	mesophilic
[Ref.: #38239]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #123443]	Temperature range	psychrophilic
[Ref.: #123443]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #123443]

Oxygen tolerance

obligate aerobe

[Ref.: #30022]	Ability of spore formation	no
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %90.905

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #123443]		NaCl		growth	0-4	%
[Ref.: #123443]		NaCl	no	growth	6	%
[Ref.: #123443]		NaCl	no	growth	8	%
[Ref.: #123443]		NaCl	no	growth	10	%

Observation

quinones: MK-8(H₄, ω-cycl)

	Metabolite utilization	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30022]		3-hydroxybutyrate ChEBI	+	carbon source
[Ref.: #30022]		alanine ChEBI	+	carbon source
[Ref.: #68371]		amygdalin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #20098]		arabinose ChEBI	-
[Ref.: #68371]		arbutin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]		arginine ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #30022]		aspartate ChEBI	+	carbon source
[Ref.: #68371]		cellobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #20098]		cellulose ChEBI	-
[Ref.: #30022]		citrate ChEBI	+	carbon source
[Ref.: #123443]		citrate ChEBI	-	carbon source
[Ref.: #68371]		D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		D-fructose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		D-galactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]		D-glucose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]		D-glucose ChEBI	-	fermentation	* from API 20NE
[Ref.: #68371]		D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		D-mannitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		D-mannose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		D-ribose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		D-tagatose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		D-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]		decanoate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68371]		erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #30022]		esculin ChEBI	+	hydrolysis
[Ref.: #123443]		esculin ChEBI	-	hydrolysis
[Ref.: #68369]		esculin ChEBI	+	hydrolysis	* from API 20NE, API Coryne
[Ref.: #20098]		fructose ChEBI	-
[Ref.: #68371]		galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]		gelatin ChEBI	+	hydrolysis	* from API 20NE
[Ref.: #68379]		gelatin ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #20098]		glucose ChEBI	+
[Ref.: #68371]		glycogen ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #123443]		hippurate ChEBI	+	hydrolysis
[Ref.: #30022]		histidine ChEBI	+	carbon source
[Ref.: #68371]		inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		L-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #30022]		leucine ChEBI	+	carbon source
[Ref.: #68371]		maltose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #20098]		mannitol ChEBI	-
[Ref.: #30022]		mannitol ChEBI	+	carbon source
[Ref.: #68371]		melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		melibiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		methyl alpha-D-glucopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]		methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #20098]		myo-inositol ChEBI	+
[Ref.: #30022]		N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #68369]		N-acetylglucosamine ChEBI	+	assimilation	* from API 20NE
[Ref.: #68371]		N-acetylglucosamine ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #123443]		nitrate ChEBI	+	reduction
[Ref.: #123443]		nitrate ChEBI	-	respiration
[Ref.: #68369]		nitrate ChEBI	-	reduction	* from API 20NE
[Ref.: #123443]		nitrite ChEBI	-	reduction
[Ref.: #68371]		Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #30022]		proline ChEBI	+	carbon source
[Ref.: #30022]		pyruvate ChEBI	+	carbon source
[Ref.: #20098]		raffinose ChEBI	-
[Ref.: #68371]		raffinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #20098]		rhamnose ChEBI	-
[Ref.: #68371]		ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #30022]		ribose ChEBI	+	carbon source
[Ref.: #68371]		salicin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #30022]		serine ChEBI	+	carbon source
[Ref.: #68371]		starch ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #20098]		sucrose ChEBI	-
[Ref.: #68371]		sucrose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #30022]		trehalose ChEBI	+	carbon source
[Ref.: #68371]		trehalose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]		tryptophan ChEBI	-	energy source	* from API 20NE
[Ref.: #68369]		urea ChEBI	+	hydrolysis	* from API 20NE, API Coryne
[Ref.: #20098]		xylose ChEBI	-
		Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #123443]		indole ChEBI	no
[Ref.: #68369]		indole ChEBI	no	* from API 20NE

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test
[Ref.: #123443]		acetoin ChEBI	-
[Ref.: #123443]		glucose ChEBI		-
[Ref.: #68369]		indole ChEBI			-	* from API 20NE

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #123443]		alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68379]		alkaline phosphatase	+	3.1.3.1	* from API Coryne, API zym
[Ref.: #68382]		alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]		alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68379]		alpha-glucosidase	+	3.2.1.20	* from API Coryne
[Ref.: #123443]		amylase	-
[Ref.: #68369]		arginine dihydrolase	-	3.5.3.6	* from API 20NE
[Ref.: #123443]		beta-galactosidase	-	3.2.1.23
[Ref.: #68379]		beta-galactosidase	-	3.2.1.23	* from API Coryne
[Ref.: #68379]		beta-glucosidase	+	3.2.1.21	* from API Coryne, API 20NE
[Ref.: #68379]		beta-glucuronidase	-	3.2.1.31	* from API Coryne, API zym
[Ref.: #123443]		caseinase	+	3.4.21.50
[Ref.: #123443]		catalase	+	1.11.1.6
[Ref.: #30022]		cytochrome oxidase	+	1.9.3.1
[Ref.: #123443]		DNase	-
[Ref.: #123443]		gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #123443]		gelatinase	+
[Ref.: #68369]		gelatinase	+		* from API 20NE
[Ref.: #68379]		gelatinase	-		* from API Coryne
[Ref.: #123443]		lecithinase	-
[Ref.: #68382]		leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #123443]		lipase	-
[Ref.: #123443]		lysine decarboxylase	-	4.1.1.18
[Ref.: #68379]		N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API Coryne, API zym
[Ref.: #68382]		naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #123443]		ornithine decarboxylase	-	4.1.1.17
[Ref.: #123443]		oxidase	-
[Ref.: #123443]		phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #123443]		protease	+
[Ref.: #68379]		pyrazinamidase	-	3.5.1.B15	* from API Coryne
[Ref.: #68379]		pyrrolidonyl arylamidase	-	3.4.19.3	* from API Coryne
[Ref.: #123443]		tryptophan deaminase	-
[Ref.: #123443]		tween esterase	-
[Ref.: #30022]		urease	+	3.5.1.5
[Ref.: #123443]		urease	+	3.5.1.5
[Ref.: #68379]		urease	+	3.5.1.5	* from API Coryne, API 20NE
		Only first 10 entries are displayed. Click here to see all.

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #11895]	25258	-	-	-	-	+	+	+	+	+	+/-	+/-	+/-	+	+/-	+/-	-	+/-	+/-	+	-	not determinedn.d.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #123443]	11151	not determinedn.d.	+/-	-	+/-	-	-	-	-	-	+/-	-	+/-	-	-	+/-	+/-	-	+/-	-	-	-	-	-	-	-	+/-	-	-	-	+/-	-	-	-	-	-	-	-	-	+/-	+/-	+/-	-	-	+/-	-	-	-	+/-	-	+/-

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #123443]	2499	not determinedn.d.	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	+	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	+	+	-	-	-	-	-	-	-	+	-	+	-	-	+	-	-	+	+	+

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #20098]	437	not determinedn.d.	-	-	+	-	-	+	+	+	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	+/-	not determinedn.d.	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #20098]	879	not determinedn.d.	+	+	+	-	+	+	+	+	-	+	+	-	+	-	+	+	+	+	-
[Ref.: #11895]	14307	-	+	-	-	-	+	-	-	+	-	+	+	-	-	-	+	+	+	+/-	-
[Ref.: #123443]	10753	-	+	+	+	+	+	+	+	-	-	-	+	-	-	-	-	-	+	-	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #11895]	Sample type/isolated from	rhizosphere
[Ref.: #11895]	Geographic location (country and/or sea, region)	Teneriffa
[Ref.: #11895]	Country	Spain
[Ref.: #11895]	Country ISO 3 Code	ESP
[Ref.: #11895]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Tenerife (the Canary Islands)
[Ref.: #67770]	Country	Spain
[Ref.: #67770]	Country ISO 3 Code	ESP
[Ref.: #67770]	Continent	Europe

[Ref.: #123443]	Sample type/isolated from	Environment, Rhizosphere
[Ref.: #123443]	Geographic location (country and/or sea, region)	Tenerife, Canary Islands
[Ref.: #123443]	Country	Spain
[Ref.: #123443]	Country ISO 3 Code	ESP
[Ref.: #123443]	Continent	Europe
[Ref.: #123443]	Isolation date	1993
* marker position based on {}

Isolation sources categories

#Host Body-Site

#Plant

#Rhizosphere

What are isolation sources categories?

Global distribution of 16S sequence GQ217497 (>99% sequence identity) for Nocardia tenerifensis subclade from Microbeatlas

Aquatic Samples
Soil Samples	11
Animal Samples	3
Plant Samples	2
Total Samples	16

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #11895]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #20098]	Biosafety level	1	German classification
[Ref.: #123443]	Biosafety level	2	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #11895]	Nocardia tenerifenis partial 16S rRNA gene	AJ556157	1481	ENA	228006 tax ID
[Ref.: #20218]	Nocardia tenerifensis culture-collection CDC:W8365 16S ribosomal RNA gene, partial sequence	GQ217497	1441	ENA	228006 tax ID	*
[Ref.: #20218]	Nocardia tenerifensis strain DSM 44704 isolate VNS31 16S ribosomal RNA gene, partial sequence	AY903613	606	ENA	228006 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Nocardia tenerifensis NBRC 101015	GCA_000308715	contig	GenBank	1206736 tax ID
[Ref.: #67770]	Nocardia tenerifensis DSM 44704	GCA_003202065	scaffold	GenBank	228006 tax ID
[Ref.: #66792]	Nocardia tenerifensis NBRC 101015	1206736.4	wgs	PATRIC	1206736 tax ID	*
[Ref.: #66792]	Nocardia tenerifensis strain DSM 44704	228006.3	wgs	PATRIC	228006 tax ID	*
[Ref.: #66792]	Nocardia tenerifensis DSM 44704	2770939559	draft	JGI IMG/M	228006 tax ID	*
[Ref.: #66792]	Nocardia tenerifensis NBRC 101015	2551306166	draft	JGI IMG/M	1206736 tax ID	*

GC-content

68.5 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Nocardia tenerifensis DSM 44704 NCBI: GCA_003202065.1
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Nocardia tenerifensis NBRC 101015 PATRIC: 1206736.4
[Ref.: #69480]	motile	no	93.155	no
[Ref.: #69480]	gram-positive	yes	88.05	yes
[Ref.: #69480]	anaerobic	no	99.491	no
[Ref.: #69480]	aerobic	yes	91.617	no
[Ref.: #69480]	halophile	no	95.327	no
[Ref.: #69480]	spore-forming	yes	86.704	yes
[Ref.: #69480]	thermophile	no	99.537	yes
[Ref.: #69480]	glucose-util	yes	91.499	no
[Ref.: #69480]	flagellated	no	97.547	no
[Ref.: #69480]	glucose-ferment	no	92.87	no

Availability in culture collections External links

Culture collection no.

DSM 44704, CIP 107929, CCUG 49019, JCM 12693, IFM 10554, NBRC 101015

SI-ID 131429

*

Literature:

Topic	Title	Authors	Journal	DOI	Year
Pathogenicity	Coculture of a Pathogenic Actinomycete and Animal Cells To Produce Nocarjamide, a Cyclic Nonapeptide with Wnt Signal-Activating Effect.	Hara Y, Arai MA, Toume K, Masu H, Sato T, Komatsu K, Yaguchi T, Ishibashi M	Org Lett	10.1021/acs.orglett.8b02522	2018	*
Phylogeny	Dehydropropylpantothenamide isolated by a co-culture of Nocardia tenerifensis IFM 10554(T) in the presence of animal cells.	Hara Y, Arai MA, Sakai K, Ishikawa N, Gonoi T, Yaguchi T, Ishibashi M	J Nat Med	10.1007/s11418-017-1161-y	2017	*
Pathogenicity	Production, isolation and biological activity of nargenicin from Nocardia sp. CS682.	Sohng JK, Yamaguchi T, Seong CN, Baik KS, Park SC, Lee HJ, Jang SY, Simkhada JR, Yoo JC	Arch Pharm Res	10.1007/s12272-001-2115-0	2008	*
Phylogeny	Nocardia altamirensis sp. nov., isolated from Altamira cave, Cantabria, Spain.	Jurado V, Boiron P, Kroppenstedt RM, Laurent F, Couble A, Laiz L, Klenk HP, Gonzalez JM, Saiz-Jimenez C, Mouniee D, Bergeron E, Rodriguez-Nava V	Int J Syst Evol Microbiol	10.1099/ijs.0.65482-0	2008	*
Phylogeny	Nocardia tenerifensis sp. nov.	Kampfer P, Buczolits S, Jackel U, Grun-Wollny I, Busse HJ	Int J Syst Evol Microbiol	10.1099/ijs.0.02841-0	2004	*

References

#11895

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44704

#20098

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#30022

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26386 (see below)

#38239 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68369

Automatically annotated from API 20NE .

#68371

Automatically annotated from API 50CH acid .

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#80039

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID131429.1 )

#123443 Collection of Institut Pasteur ; Curators of the CIP; CIP 107929

#26386

IJSEM 381 2004 ( DOI 10.1099/ijs.0.02841-0 , PubMed 15023947 )

* These data were automatically processed and therefore are not curated

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