Name: Nocardia vinacea MK703-102F1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 10770

Type strain:

Species: Nocardia vinacea

Strain Designation: MK703-102F1

Culture col. no.: DSM 44638, CIP 107372, FERM P-16580, IFO 16497, JCM 10988, NBRC 16497, IFM 10175

Strain history: CIP <- 2002, JCM <- 2000, M. Hamada: strain MK703-102F1

NCBI tax ID(s): 1206742 (strain), 96468 (species)

SI-ID 88659

JCM 10988, IFO 16497, DSM 44638, CIP 107372, NBRC 16497

Section

Nocardia vinacea MK703-102F1 is a facultative anaerobe, spore-forming, mesophilic human pathogen that builds an aerial mycelium and was isolated from soil.

spore-forming
facultative anaerobe
human pathogen
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Nocardiaceae*
	Genus	*Nocardia*
	Species	**Nocardia vinacea**
	Full Scientific Name (LPSN)	Nocardia vinacea Kinoshita et al. 2002

Information on morphological and physiological properties Morphology

[Ref.: #123843]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #123843]	Cell shape	rod-shaped

[Ref.: #123843]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %96.742

[Ref.: #123843]	Hemolysis ability	1

[Ref.: #69359]	Colony color	Beige (1001)
[Ref.: #69359]	Cultivation medium used	ISP 2

[Ref.: #69359]	Colony color	Beige (1001)
[Ref.: #69359]	Cultivation medium used	ISP 6

[Ref.: #69359]	Colony color	Maize yellow (1006)
[Ref.: #69359]	Cultivation medium used	ISP 4

[Ref.: #69359]	Colony color	Ochre brown (8001)
[Ref.: #69359]	Cultivation medium used	ISP 7

[Ref.: #69359]	Colony color	Pastel yellow (1034)
[Ref.: #69359]	Cultivation medium used	ISP 3

[Ref.: #69359]	Colony color	Sun yellow (1037)
[Ref.: #69359]	Cultivation medium used	suter with tyrosine

[Ref.: #69359]	Colony color	Sun yellow (1037)
[Ref.: #69359]	Cultivation medium used	suter without tyrosine

[Ref.: #69359]	Colony color	Terra brown (8028)
[Ref.: #69359]	Cultivation medium used	ISP 5

[Ref.: #69359]	Pigment production	yes
[Ref.: #69359]	Pigment name	Melanin
[Ref.: #69359]	Pigment production	yes
[Ref.: #69359]	Pigmentation color	Beige (1001), brown beige (1011)
[Ref.: #69359]	Pigment name	soluble pigment

[Ref.: #69359]	Multicellular complex forming ability	yes
[Ref.: #69359]	Multicellular complex name	Aerial mycelium
[Ref.: #69359]	Multicellular complex color	Cream (9001)
[Ref.: #69359]	Medium Name (multicellularity)	ISP 2

[Ref.: #69359]	Multicellular complex forming ability	no
[Ref.: #69359]	Multicellular complex name	Aerial mycelium
[Ref.: #69359]	Medium Name (multicellularity)	ISP 3

[Ref.: #69359]	Multicellular complex forming ability	no
[Ref.: #69359]	Multicellular complex name	Aerial mycelium
[Ref.: #69359]	Medium Name (multicellularity)	ISP 4

[Ref.: #69359]	Multicellular complex forming ability	yes
[Ref.: #69359]	Multicellular complex name	Aerial mycelium
[Ref.: #69359]	Multicellular complex color	Signal white (9003)
[Ref.: #69359]	Medium Name (multicellularity)	ISP 5

[Ref.: #69359]	Multicellular complex forming ability	no
[Ref.: #69359]	Multicellular complex name	Aerial mycelium
[Ref.: #69359]	Medium Name (multicellularity)	ISP 6

[Ref.: #69359]	Multicellular complex forming ability	yes
[Ref.: #69359]	Multicellular complex name	Aerial mycelium
[Ref.: #69359]	Multicellular complex color	Traffic white (9016)
[Ref.: #69359]	Medium Name (multicellularity)	ISP 7

[Ref.: #69359]	Multicellular complex forming ability	yes
[Ref.: #69359]	Multicellular complex name	Aerial mycelium
[Ref.: #69359]	Multicellular complex color	Cream (9001)
[Ref.: #69359]	Medium Name (multicellularity)	suter with tyrosine

[Ref.: #69359]	Multicellular complex forming ability	yes
[Ref.: #69359]	Multicellular complex name	Aerial mycelium
[Ref.: #69359]	Multicellular complex color	Cream (9001)
[Ref.: #69359]	Medium Name (multicellularity)	suter without tyrosine

Information on culture and growth conditions Culture and growth conditions

[Ref.: #11947]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #11947]

Culture medium growth

[Ref.: #11947]

Culture medium link

Medium recipe at MediaDive

[Ref.: #11947]

Culture medium composition

expand / minimize

[Ref.: #33757]

Culture medium

MEDIUM 57 - for Streptomyces, Nocardioides, Lentzea albidocapillata and Streptoverticillium reticulum

[Ref.: #33757]

Culture medium growth

[Ref.: #33757]

Culture medium composition

expand / minimize

[Ref.: #123843]

Culture medium

CIP Medium 57

[Ref.: #123843]

Culture medium growth

[Ref.: #123843]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #11947]		growth	28 °C
[Ref.: #33757]		growth	30 °C
[Ref.: #67770]		growth	28 °C
[Ref.: #123843]		growth	25-41 °C
[Ref.: #123843]	no	growth	10 °C
[Ref.: #123843]	no	growth	45 °C

[Ref.: #11947]	Temperature range	mesophilic
[Ref.: #33757]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #123843]	Temperature range	psychrophilic
[Ref.: #123843]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #123843]

Oxygen tolerance

facultative anaerobe

[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.456

	Salt	Tested relation		Salt conc.
[Ref.: #69359]	NaCl		growth	0-2.5	%
[Ref.: #123843]	NaCl		growth	0	%
[Ref.: #123843]	NaCl	no	growth	2	%
[Ref.: #123843]	NaCl	no	growth	4	%
[Ref.: #123843]	NaCl	no	growth	6	%
[Ref.: #123843]	NaCl	no	growth	8	%
[Ref.: #123843]	NaCl	no	growth	10	%

[Ref.: #67770]

Observation

quinones: MK-8(H₄)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68371]	amygdalin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #69359]	arabinose ChEBI	+	growth
[Ref.: #68371]	arbutin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]	arginine ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68371]	cellobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #69359]	cellulose ChEBI	-	growth
[Ref.: #68371]	D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fructose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-galactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]	D-glucose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68371]	D-glucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]	D-glucose ChEBI	-	fermentation	* from API 20NE, API Coryne
[Ref.: #68369]	D-mannitol ChEBI	+	assimilation	* from API 20NE
[Ref.: #68371]	D-mannitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68379]	D-mannitol ChEBI	-	fermentation	* from API Coryne
[Ref.: #68371]	D-mannose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-ribose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68379]	D-ribose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68371]	D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-tagatose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68379]	D-xylose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68369]	decanoate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #123843]	esculin ChEBI	+	hydrolysis
[Ref.: #68371]	esculin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68379]	esculin ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #69359]	fructose ChEBI	+/-	growth
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]	gelatin ChEBI	-	hydrolysis	* from API 20NE, API Coryne
[Ref.: #68371]	gentiobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	gluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #69359]	glucose ChEBI	+	growth
[Ref.: #68371]	glycerol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycogen ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #123843]	hippurate ChEBI	-	hydrolysis
[Ref.: #69359]	inositol ChEBI	+/-	growth
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]	L-arabinose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68371]	L-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	lactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68379]	lactose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68369]	malate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68371]	maltose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68379]	maltose ChEBI	-	fermentation	* from API Coryne
[Ref.: #69359]	mannose ChEBI	+/-	growth
[Ref.: #68371]	melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melibiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]	N-acetylglucosamine ChEBI	+	assimilation	* from API 20NE
[Ref.: #68371]	N-acetylglucosamine ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #123843]	nitrate ChEBI	+	reduction
[Ref.: #123843]	nitrate ChEBI	+	respiration
[Ref.: #68379]	nitrate ChEBI	-	reduction	* from API Coryne
[Ref.: #123843]	nitrite ChEBI	-	reduction
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #69359]	raffinose ChEBI	-	growth
[Ref.: #68371]	raffinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #69359]	rhamnose ChEBI	-	growth
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	salicin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	starch ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #69359]	sucrose ChEBI	-	growth
[Ref.: #68371]	sucrose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68379]	sucrose ChEBI	-	fermentation	* from API Coryne
[Ref.: #68371]	trehalose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]	tryptophan ChEBI	-	energy source	* from API 20NE
[Ref.: #68371]	turanose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68369]	urea ChEBI	-	hydrolysis	* from API 20NE, API Coryne
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #69359]	xylose ChEBI	-	growth
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #123843]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	yes	no

	Metabolite	Production
[Ref.: #123843]	indole ChEBI	no
[Ref.: #67770]	tubelactomicin A ChEBI	yes
[Ref.: #68369]	indole ChEBI	no	* from API 20NE

	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test
[Ref.: #123843]	acetoin ChEBI	-
[Ref.: #123843]	glucose ChEBI		-
[Ref.: #68369]	indole ChEBI			-	* from API 20NE

	Enzyme	Enzyme activity	EC number
[Ref.: #123843]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68379]	alkaline phosphatase	-	3.1.3.1	* from API Coryne
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68379]	alpha-glucosidase	+	3.2.1.20	* from API Coryne, API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #123843]	amylase	-
[Ref.: #68369]	arginine dihydrolase	-	3.5.3.6	* from API 20NE
[Ref.: #123843]	beta-galactosidase	+	3.2.1.23
[Ref.: #68379]	beta-galactosidase	-	3.2.1.23	* from API Coryne, API zym
[Ref.: #68379]	beta-glucosidase	-	3.2.1.21	* from API Coryne
[Ref.: #68379]	beta-glucuronidase	-	3.2.1.31	* from API Coryne, API zym
[Ref.: #123843]	caseinase	-	3.4.21.50
[Ref.: #123843]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #123843]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #123843]	gelatinase	-
[Ref.: #68379]	gelatinase	-		* from API Coryne, API 20NE
[Ref.: #123843]	lecithinase	-
[Ref.: #123843]	lipase	-
[Ref.: #123843]	lysine decarboxylase	+	4.1.1.18
[Ref.: #68379]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API Coryne, API zym
[Ref.: #123843]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #123843]	oxidase	-
[Ref.: #123843]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #68379]	pyrazinamidase	-	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API Coryne
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #123843]	tryptophan deaminase	-
[Ref.: #123843]	tween esterase	-
[Ref.: #123843]	urease	+	3.5.1.5
[Ref.: #68379]	urease	-	3.5.1.5	* from API Coryne, API 20NE
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.