Name: Nocardia asteroides DSM 46010
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 10644

Type strain:

Species: Nocardia asteroides

Culture col. no.: DSM 46010, CIP 369, IMET 7158

Strain history: <- IMET <- CIP

NCBI tax ID(s): 1824 (species)

SI-ID 50691

DSM 46010, CIP 369, IMET 7158

Special Collections

DSMZ
CIP

Other strains from Nocardia asteroides

Section

Nocardia asteroides DSM 46010 is a spore-forming human pathogen that was isolated from brain abscess.

spore-forming
human pathogen
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Nocardiaceae*
	Genus	*Nocardia*
	Species	**Nocardia asteroides**
	Full Scientific Name (LPSN)	Nocardia asteroides (Eppinger 1891) Blanchard 1896 (Approved Lists 1980)

Synonym

"Cladothrix asteroides"

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %91.144

Information on culture and growth conditions Culture and growth conditions

[Ref.: #12283]

Culture medium

ORGANIC MEDIUM 79 (DSMZ Medium 426)

[Ref.: #12283]

Culture medium growth

[Ref.: #12283]

Culture medium link

Medium recipe at MediaDive

[Ref.: #12283]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #12283]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]

Ability of spore formation

yes Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #12283]	Sample type/isolated from	brain abscess
* marker position based on {}

Isolation sources categories

#Host Body-Site	#Other	#Abscess
#Host Body-Site	#Organ	#Brain

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #12283]	Pathogenicity (human)	yes
[Ref.: #12283]	Pathogenicity (animal)	yes
[Ref.: #12283]	Biosafety level	2	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Nocardia asteroides strain FDAARGOS_1485	1824.12	complete	PATRIC	1824 tax ID	*
[Ref.: #66792]	Nocardia asteroides strain FDAARGOS_1485	1824.17	complete	PATRIC	1824 tax ID	*
[Ref.: #66792]	Nocardia asteroides strain FDAARGOS_1485	1824.16	complete	PATRIC	1824 tax ID	*
[Ref.: #66792]	Nocardia asteroides strain FDAARGOS_1485	1824.15	complete	PATRIC	1824 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Nocardia asteroides strain FDAARGOS_1485 strain Not applicable PATRIC: 1824.12
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Nocardia asteroides strain FDAARGOS_1485 strain Not applicable PATRIC: 1824.12
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	91.144	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	97.049	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	59.181	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	88.497	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	96.8	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	88.5	no

Availability in culture collections External links

[Ref.: #12283]

Culture collection no.

DSM 46010, CIP 369, IMET 7158

[Ref.: #79914]

SI-ID 50691

References

#12283

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46010

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#79914

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID50691.1 )

* These data were automatically processed and therefore are not curated

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Nocardia asteroides strain FDAARGOS_1485 strain Not applicable

Nocardia asteroides strain FDAARGOS_1485 strain Not applicable

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