Gordonia polyisoprenivorans (DSM 44302, ATCC BAA-14, IFO 16320)

Name: Gordonia polyisoprenivorans (DSM 44302, ATCC BAA-14, IFO 16320)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 10598

Type strain

Strain Designation Kd2

Culture col. no. DSM 44302 ATCC BAA-14 IFO 16320 JCM 10675 NBRC 16320 5 more

NCBI tax ID(s) 1077976 84595

Special Collections DSMZ JCM KCTC CIP

History <- A. Steinbüchel, Kd2 DSM 44302 <-- A. Steinbüchel Kd2. CIP <- 1999, DSMZ <- A. Steinbüchel: strain Kd2

Links

Gordonia polyisoprenivorans Kd2 is an obligate aerobe, Gram-positive, rod-shaped bacterium that was isolated from fouling tire water on a farmers's field.

Gram-positive rod-shaped obligate aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 44255

ATCC BAA-14,DSM 44302,IFO 16320,JCM 10675,CIP 106350,NCIMB 13616,KCTC 9953,NBRC 16320

@ref 20215

Last LPSN update 2026-02-09 11:20:18

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Gordoniaceae

Genus Gordonia

Species Gordonia polyisoprenivorans

Full scientific name Gordonia polyisoprenivorans Linos et al. 1999

BacDive ID	Other strains from **Gordonia polyisoprenivorans** (2)	Type strain
10597	G. polyisoprenivorans ID 3865, VH 2, DSM 44266
10599	G. polyisoprenivorans B293, DSM 44439, JCM 14875, IFM 10858

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
121928	positive	rod-shaped
125438			93.5
125438	positive		90.252
125439	positive		98.9

Colony morphology

Multimedia

@ref:	11655
multimedia content:	DSM_44302.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_44302.jpg
caption:	Medium 535 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
11655	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)	Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
35926	MEDIUM 116 - for Streptomyces, Nocardia, Streptosporangium and Mycobacterium chlorophenolicum		Distilled water make up to (1000.000 ml);Agar (20.000 g);Glucose (4.000g);Yeast extract (4.000 g);Malt extract (10.000 g)
121928	CIP Medium 116	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
11655	positive	growth	28
35926	positive	growth	30
67770	positive	growth	28
121928	positive	growth	25-30
121928	negative	growth	10
121928	negative	growth	37
121928	negative	growth	41
121928	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
121928	obligate aerobe
125438	aerobe	91.786

Halophily

@ref	Salt	Growth	Tested relation	Concentration
121928	NaCl	positive	growth	0-2 %
121928	NaCl		growth	6 %
121928	NaCl		growth	8 %
121928	NaCl		growth	10 %

Observation

67770

Observationquinones: MK-9(H₂)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
121928	16947 ChEBI	citrate	-	carbon source
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	-	builds acid from	from API 50CH acid
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68369	16899 ChEBI	D-mannitol	+	assimilation	from API 20NE
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68369	27689 ChEBI	decanoate	-	assimilation	from API 20NE
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
121928	4853 ChEBI	esculin	-	hydrolysis
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68369	24265 ChEBI	gluconate	+	assimilation	from API 20NE
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
121928	606565 ChEBI	hippurate	-	hydrolysis
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68371	17306 ChEBI	maltose	-	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68369	59640 ChEBI	N-acetylglucosamine	+	assimilation	from API 20NE
121928	17632 ChEBI	nitrate	-	reduction
121928	17632 ChEBI	nitrate	-	respiration
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
121928	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
121928	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
121928	35581 ChEBI	indole
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test	Voges-proskauer-test	Methylred-test
121928	15688 ChEBI	acetoin		-
121928	17234 ChEBI	glucose			-
68369	35581 ChEBI	indole	-			from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
121928	alcohol dehydrogenase	-	1.1.1.1
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
121928	amylase	-
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68382	beta-galactosidase	-	3.2.1.23	from API zym
121928	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68382	beta-glucuronidase	-	3.2.1.31	from API zym
121928	caseinase	-	3.4.21.50
121928	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
121928	DNase	-
121928	gamma-glutamyltransferase	-	2.3.2.2
121928	gelatinase	-
68369	gelatinase	-		from API 20NE
121928	lecithinase	-
121928	lipase	-
121928	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
121928	ornithine decarboxylase	-	4.1.1.17
121928	oxidase	-
121928	phenylalanine ammonia-lyase	-	4.3.1.24
121928	protease	-
68382	trypsin	-	3.4.21.4	from API zym
121928	tryptophan deaminase	-
121928	tween esterase	+
121928	urease	+	3.5.1.5
68369	urease	-	3.5.1.5	from API 20NE
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
121928	-	+	+	+	+	+	-	-	-	-	+	+	-	-	-	+	-	-	-	-
11655	-	-	+/-	+/-	-	-	-	-	-	-	+	+/-	-	-	-	+	-	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
11655	-	-	-	-	-	-	-	-	+/-	+/-	+/-	+	+	+/-	+	-	+/-	+/-	+	+	not determinedn.d.

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
121928	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	+/-	+/-	+/-	-	+/-	-	-	-	-	-	-	+/-	-	-	-	-	-	-	-	-	+/-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
121928	not determinedn.d.	+	+	+	+	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	+	+	-	-	-	-	+	+	+	+	+	+	-	-	+	-	-	+	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	+	+	+	+	+	+	-	-	+	+	+	+	-	+	+	+	+	-	+	-	-	-	-	-	-	+	-	+	-	+	+	+	+	-	+	+	-	+	+	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Agriculture	#Field
#Environmental	#Aquatic	-

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
11655	fouling tire water on a farmers's field	Northrhine-Westfalia, Münster	Germany	DEU	Europe
67770	Foul water inside a deteriorated automobile tyre on a farmer's field	Münster	Germany	DEU	Europe
121928	Environment, Fouling tire water on a farmer's field

Taxonmaps

69479

Global distribution of 16S sequence HM195279 (>99% sequence identity) for Gordonia from Microbeatlas

Aquatic Samples	521
Soil Samples	57
Animal Samples	885
Plant Samples	182
Total Samples	1645

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
11655	1	Risk group (German classification) According to TRBA 466
121928	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM1239628v1 assembly for Gordonia polyisoprenivorans ATCC BAA-14	contig	GCA_012396285	84595.10	8110741594	84595	65.92
124043	ASM5130310v1 assembly for Gordonia polyisoprenivorans NBRC 16320	scaffold	GCA_051303105			84595	64.41
67770	ASM24132v2 assembly for Gordonia polyisoprenivorans NBRC 16320 = JCM 10675	contig	GCA_000241325	1077976.3	2523231043	1077976	54.19
66792	ASM131358v1 assembly for Gordonia polyisoprenivorans NBRC 16320 = JCM 10675	contig	GCA_001313585	1077976.8	2734481953	1077976

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Gordonia polyisoprenivorans strain W7924 16S ribosomal RNA gene, partial sequence	HM195279	1445		84595
11655	Gordonia polyisoprenivorans 16S rRNA gene	Y18310	1457		84595

GC content

@ref	GC-content (mol%)	Method
67770	66.9	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Gordonia polyisoprenivorans NBRC 16320 = JCM 10675
NCBI: GCA_000241325

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	88.10	no
125439	gram_stain	BacteriaNetⓘ	positive	98.90	no
125439	motility	BacteriaNetⓘ	no	89.70	no
125439	spore_formation	BacteriaNetⓘ	no	63.70	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Gordonia polyisoprenivorans NBRC 16320
PATRIC: 1077976.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	90.25	no
125438	anaerobic	anaerobicⓘ	no	97.55	no
125438	spore-forming	spore-formingⓘ	no	56.44	no
125438	aerobic	aerobicⓘ	yes	91.79	yes
125438	thermophilic	thermophileⓘ	no	96.50	no
125438	flagellated	motile2+ⓘ	no	93.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Biodegradation of cis-1,4-polyisoprene rubbers by distinct actinomycetes: microbial strategies and detailed surface analysis.	Linos A, Berekaa MM, Reichelt R, Keller U, Schmitt J, Flemming HC, Kroppenstedt RM, Steinbuchel A.	Appl Environ Microbiol	10.1128/aem.66.4.1639-1645.2000	2000
Metabolism	Microbial degradation of the multiply branched alkane 2,6,10,15,19, 23-hexamethyltetracosane (Squalane) by Mycobacterium fortuitum and Mycobacterium ratisbonense.	Berekaa MM, Steinbuchel A.	Appl Environ Microbiol	10.1128/aem.66.10.4462-4467.2000	2000
Metabolism	Characterization of the 101-kilobase-pair megaplasmid pKB1, isolated from the rubber-degrading bacterium Gordonia westfalica Kb1.	Broker D, Arenskotter M, Legatzki A, Nies DH, Steinbuchel A.	J Bacteriol	10.1128/jb.186.1.212-225.2004	2004
Genetics	Genomic, Phylogenetic and Physiological Characterization of the PAH-Degrading Strain Gordonia polyisoprenivorans 135.	Frantsuzova E, Bogun A, Kopylova O, Vetrova A, Solyanikova I, Streletskii R, Delegan Y.	Biology (Basel)	10.3390/biology13050339	2024
	Specialized Metabolism of Gordonia Genus: An Integrated Survey on Chemodiversity Combined with a Comparative Genomics-Based Analysis.	Sanchez-Suarez J, Diaz L, Coy-Barrera E, Villamil L.	BioTech (Basel)	10.3390/biotech11040053	2022
Genetics	GenoType NTM-DR Performance Evaluation for Identification of Mycobacterium avium Complex and Mycobacterium abscessus and Determination of Clarithromycin and Amikacin Resistance.	Huh HJ, Kim SY, Shim HJ, Kim DH, Yoo IY, Kang OK, Ki CS, Shin SY, Jhun BW, Shin SJ, Daley CL, Koh WJ, Lee NY.	J Clin Microbiol	10.1128/jcm.00516-19	2019
	Biodegradation of isoprene by soil Actinomycetota from coffee-tea integrated plantations in a tropical evergreen forest.	Uttarotai T, McGenity TJ, Sutheeworapong S, Mhuantong W, Khongdee N, Bovonsombut S, Chitov T.	Curr Res Microb Sci	10.1016/j.crmicr.2025.100382	2025
	Genomic and phenotypic characterization of Pseudomonas sp. GOM7, a novel marine bacterial species with antimicrobial activity against multidrug-resistant Staphylococcus aureus.	Romero-Gonzalez LE, Rojas-Vargas J, Muriel-Millan LF, Bustos-Martinez J, Bustamante VH, Pardo-Lopez L.	PLoS One	10.1371/journal.pone.0288504	2023
	Diverse alkane hydroxylase genes in microorganisms and environments.	Nie Y, Chi CQ, Fang H, Liang JL, Lu SL, Lai GL, Tang YQ, Wu XL.	Sci Rep	10.1038/srep04968	2014
Metabolism	On the Enigma of Glutathione-Dependent Styrene Degradation in Gordonia rubripertincta CWB2.	Heine T, Zimmerling J, Ballmann A, Kleeberg SB, Ruckert C, Busche T, Winkler A, Kalinowski J, Poetsch A, Scholtissek A, Oelschlagel M, Schmidt G, Tischler D.	Appl Environ Microbiol	10.1128/aem.00154-18	2018
Metabolism	Discovery of Lysine Hydroxylases in the Clavaminic Acid Synthase-Like Superfamily for Efficient Hydroxylysine Bioproduction.	Hara R, Yamagata K, Miyake R, Kawabata H, Uehara H, Kino K.	Appl Environ Microbiol	10.1128/aem.00693-17	2017
Phylogeny	Taxonomic characterization of two rubber degrading bacteria belonging to the species Gordonia polyisoprenivorans and analysis of hyper variable regions of 16S rDNA sequences.	Arenskotter M, Baumeister D, Berekaa MM, Potter G, Kroppenstedt RM, Linos A, Steinbuchel A	FEMS Microbiol Lett	10.1111/j.1574-6968.2001.tb10961.x	2001
Phylogeny	Gordonia mangrovi sp. nov., a novel actinobacterium isolated from mangrove soil in Hainan.	Xie Y, Zhou S, Xu Y, Wu W, Xia W, Zhang R, Huang D, Huang X	Int J Syst Evol Microbiol	10.1099/ijsem.0.004310	2020
Phylogeny	Gordonia sediminis sp. nov., an actinomycete isolated from mangrove sediment.	Sangkanu S, Suriyachadkun C, Phongpaichit S	Int J Syst Evol Microbiol	10.1099/ijsem.0.003399	2019
Phylogeny	Gordonia oryzae sp. nov., isolated from rice plant stems (Oryza sativa L.).	Muangham S, Lipun K, Thamchaipenet A, Matsumoto A, Duangmal K	Int J Syst Evol Microbiol	10.1099/ijsem.0.003368	2019
Phylogeny	Gordonia polyisoprenivorans sp. nov., a rubber-degrading actinomycete isolated from an automobile tyre.	Linos A, Steinbuchel A, Sproer C, Kroppenstedt RM	Int J Syst Bacteriol	10.1099/00207713-49-4-1785	1999

References

#11655	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44302
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#35926	; Curators of the CIP;
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68369	Automatically annotated from API 20NE .
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#121928	Collection of Institut Pasteur ; Curators of the CIP; CIP 106350
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Gordonia polyisoprenivorans (DSM 44302, ATCC BAA-14, IFO 16320)

Name and taxonomic classification

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Physiology and metabolism

Oxygen tolerance

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API zym

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Genome browser: GCA_012396285

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