Gordonia rubripertincta (DSM 43248, ATCC 25593, CIP 100848)

Name: Gordonia rubripertincta (DSM 43248, ATCC 25593, CIP 100848)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 10561

Type strain

Culture col. no. DSM 43248 ATCC 25593 CIP 100848 IMET 7372 NCTC 10668 12 more

NCBI tax ID(s) 36822

Special Collections DSMZ CCUG JCM CIP

History <- NCTC (Gordona rubra) KCC A-0227 <-- M. Tsukamura 3605 (M. Tsukamura 60003). KCC A-0199 <-- M. Goodfellow N657 <-- H. Mordarska T3 <-- M. Tsukamura 3605 (M. Tsukamura 60003). CIP <- 1984, ATCC <- M. Tsukamura: strain 3605, Gordona rubra

Links

Gordonia rubripertincta DSM 43248 is an obligate aerobe, mesophilic, Gram-positive prokaryote that was isolated from soil.

Gram-positive rod-shaped obligate aerobe mesophilic 16S sequence

Name and taxonomic classification

SI-ID 2982

LMG 5368,ATCC 25593,CCM 2632,CCUG 34958,DSM 43248,IMET 7372,JCM 3199,NCTC 10668,NRRL B-16540,CIP 100848,CCRC 13381,CCRC 13697,CCUG 12170,JCM 3227,VKM Ac-1017,BCRC 13381,BCRC 13697

@ref 20215

Last LPSN update 2025-12-16 09:49:22

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Gordoniaceae

Genus Gordonia

Species Gordonia rubripertincta

Full scientific name Gordonia rubripertincta corrig. (Hefferan 1904) Stackebrandt et al. 1989

Synonyms (8)

Rhodococcus corallinus
Gordonia rubropertinctus
"Bacillus rubropertinctus"
"Gordona rubra"
"Serratia corallina"
Rhodococcus rubropertinctus
Gordona rubropertinctus
Gordona rubripertincta

BacDive ID	Other strains from **Gordonia rubripertincta** (11)	Type strain
10559	G. rubripertincta DSM 43197, ATCC 14352, JCM 3204, KCC A-0204, ... (type strain)
10562	G. rubripertincta 279, Breed 279, Schering 259, DSM 43291, ...
10563	G. rubripertincta Schering 283, DSM 43303, ATCC 15905, RIA ...
10564	G. rubripertincta DSM 43570, CBS 606.67, SN 5800
10565	G. rubripertincta 60017, DSM 46038, ATCC 19067, IMET 7425, ...
10566	G. rubripertincta 60027, B-4-1443-54, Mitsuitoatsu Chem. I, ...
10567	G. rubripertincta Gdf N658, M658, T4, DSM 46066, CIP 104650, ...
103876	G. rubripertincta SF005681(FSU),
147230	G. rubripertincta CCUG 33112
148571	G. rubripertincta CCUG 35652
160171	G. rubripertincta CWB2, DSM 46758

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
122293	positive	rod-shaped

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
10904	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
38434	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
122293	CIP Medium 3	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
10904	positive	growth	37	mesophilic
38434	positive	growth	30	mesophilic
67770	positive	growth	28	mesophilic
122293	positive	growth	25-45
122293	negative	growth	10

Physiology and metabolism

Oxygen tolerance

122293

Oxygen toleranceobligate aerobe

Observation

67770

Observationquinones: MK-9(H₂)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
122293	16947 ChEBI	citrate	-	carbon source
68379	17634 ChEBI	D-glucose	-	fermentation	from API Coryne
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68379	16988 ChEBI	D-ribose	-	fermentation	from API Coryne
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68379	4853 ChEBI	esculin	-	hydrolysis	from API Coryne
122293	4853 ChEBI	esculin	-	hydrolysis
68379	5291 ChEBI	gelatin	-	hydrolysis	from API Coryne
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
68379	17306 ChEBI	maltose	-	fermentation	from API Coryne
68379	17632 ChEBI	nitrate	+	reduction	from API Coryne
122293	17632 ChEBI	nitrate	+	reduction
122293	17632 ChEBI	nitrate	-	respiration
122293	16301 ChEBI	nitrite	-	reduction
68379	17992 ChEBI	sucrose	-	fermentation	from API Coryne
68379	16199 ChEBI	urea	+	hydrolysis	from API Coryne

Metabolite production

@ref	Chebi-ID	Metabolite	Production
122293	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
122293	15688 ChEBI	acetoin	-
122293	17234 ChEBI	glucose		-

Enzymes

@ref	Value	Activity	Ec
122293	alcohol dehydrogenase	-	1.1.1.1
68379	alkaline phosphatase	+	3.1.3.1	from API Coryne
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68379	alpha-glucosidase	+	3.2.1.20	from API Coryne
68382	alpha-mannosidase	-	3.2.1.24	from API zym
122293	amylase	+
68382	beta-galactosidase	-	3.2.1.23	from API zym
122293	beta-galactosidase	-	3.2.1.23
68379	beta-galactosidase	-	3.2.1.23	from API Coryne
68379	beta-glucosidase	-	3.2.1.21	from API Coryne
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
122293	caseinase	-	3.4.21.50
122293	catalase	+	1.11.1.6
122293	DNase	-
122293	gamma-glutamyltransferase	-	2.3.2.2
122293	gelatinase	-
68379	gelatinase	-		from API Coryne
122293	lecithinase	-
122293	lipase	-
122293	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API Coryne
122293	ornithine decarboxylase	-	4.1.1.17
122293	oxidase	-
122293	phenylalanine ammonia-lyase	+	4.3.1.24
122293	protease	-
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
68379	pyrrolidonyl arylamidase	-	3.4.19.3	from API Coryne
68382	trypsin	-	3.4.21.4	from API zym
122293	tween esterase	+
122293	urease	+	3.5.1.5
68379	urease	+	3.5.1.5	from API Coryne
68382	valine arylamidase	-		from API zym

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
10904	+	-	-	+	-	-	+	-	-	+	-	-	-	-	-	-	-	-	-	-	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
10904	-	+	+/-	+/-	-	+/-	-	+/-	-	-	+/-	-	-	-	-	+	-	-	-	-
122293	-	+	+	+	+	-	-	+	-	-	+	+	-	-	-	+	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
122293	not determinedn.d.	+	+	+	+	+	-	-	+	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	+	-	-	-	-	-	-	+	+	+	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	+	-	-	-	-	-	-	-	+	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	+	-	-	+	-	-	-	-	-	-	-	+	-	-	-	-	+	-	-	+	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Isolation date
10904	soil
67770	Soil
122293	Environment, Soil	1967

Taxonmaps

69479

Global distribution of 16S sequence AY995557 (>99% sequence identity) for Gordonia from Microbeatlas

Aquatic Samples	44
Soil Samples	28
Animal Samples	117
Plant Samples	7
Total Samples	196

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
10904	1	Risk group (German classification) According to TRBA 466
122293	1	Risk group (French classification) According to TRBA 466

Phages

@ref	Name	Strain number
124042	Gordonia phage N13	DSM 43248

Sequence information

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Gordonia rubripertincta strain DSM 43248 16S ribosomal RNA gene, partial sequence	AY995557	1479	36822
20218	Gordonia rubripertincta strain ATCC 25593 16S ribosomal RNA gene, partial sequence	GQ871822	610	36822
124043	Gordonia rubripertincta strain JCM 3199 16S ribosomal RNA gene, partial sequence.	AY995558	1479	36822

GC content

@ref	GC-content (mol%)	Method
67770	67	thermal denaturation, midpoint method (Tm)
67770	69	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	Actinomycetes from the Red Sea Sponge Coscinoderma mathewsi: Isolation, Diversity, and Potential for Bioactive Compounds Discovery.	Shamikh YI, El Shamy AA, Gaber Y, Abdelmohsen UR, Madkour HA, Madkour HA, Horn H, Hassan HM, Elmaidomy AH, Alkhalifah DHM, Hozzein WN.	Microorganisms	10.3390/microorganisms8050783	2020
Pathogenicity	Pathogenic Nocardia, Rhodococcus, and related organisms are highly susceptible to imidazole antifungals.	Dabbs ER, Naidoo S, Lephoto C, Nikitina N.	Antimicrob Agents Chemother	10.1128/aac.47.4.1476-1478.2003	2003
Transcriptome	Lytic bacteriophages of Gordonia rubripertincta from topsoil in Lubbock, Texas: FlyingTortilla and ScarletRaider.	Miller LN, Block N, Dickens W, Bellew C, Deluna C, Makilan F, Bhakta M, Crawford A, Criner T, Drucker C, Fayyaz A, Goh J, Guetersloh C, Jansen C, Pham D, Resendez A, Rowell A, Mosharraf FB, Smith AC, Bono LM.	Microbiol Resour Announc	10.1128/mra.01333-24	2025
	Genome Sequence of Gordonia rubripertincta Phage DoobyDoo of the DV Cluster.	Abdulrehman I, Angeles N, Bostock A, Burns C, Lim S, Nalley A, Olander M, Penny P, Phipps B, Price J, Rose J, Smith G, Spalding M, Weisman-Rosenberger S, Connerly P, Watt D, Rueschhoff E.	MicroPubl Biol	10.17912/micropub.biology.001471	2025
	Genome Sequences of the Arthrobacter globiformis Phage BillyTP (Cluster AY) and Gordonia rubripertincta Phage MAnor (Cluster CT).	Melton J, Augustus C, Dotson J, Camara A, Christian L, McClendon D, Severson M, Wills M, Burris D, Williams D, Williams V, Ganguly S.	MicroPubl Biol	10.17912/micropub.biology.001486	2025
	Complete Genome Sequence of the Cluster DJ Actinobacteriophage, Petito, isolated on the host Gordonia rubripertinca.	Benson E, Blount M, Chauhan S, Ehrhart J, Foster A, Ingber A, Julian M, Kwansah D, Le T, May E, Mazel E, Morency E, Nelson S, O'Toole C, Potter K, Vita L, Weigand K, Monti D.	MicroPubl Biol	10.17912/micropub.biology.001456	2025
	Genome Sequences of three CT cluster Bacteriophages isolated in Durham, North Carolina on Gordonia rubripertincta.	Simmons KJ, Lambert AR, Loekken MW, Schreiner LG, Copley CR, Murthy TH, Nelson AS, Rosenberg DB, Vanderputten AL, Broussard A, Shriver K, Fogarty MP.	MicroPubl Biol	10.17912/micropub.biology.001487	2025
Genetics	Genome sequences of G. rubripertincta bacteriophages Eddiemania and UBSmoodge isolated in Las Vegas, Nevada.	Mandel MM, Dudek VL, Handelman ED, Tilleth R, Kimberley KW, McKenna CC, Theoret JR, Yoon EJ, Windsor EJ.	Microbiol Resour Announc	10.1128/mra.00019-25	2025
	Genome sequence of Xenia2 a DV cluster phage that infects Gordonia rubripertincta.	Agaiby C, Ahmed M, Argueta A, Arrowood K, Barrier KP, Church MW, Connell CR, Dao KD, Dao KHT, Davenport MR, Edmondson MD, Estabrook MI, Gondhi S, Gonzalez P, Leduc F, Ma T, Mansoor A, Mansoor S, Mattley L, Meyer C, Nguyen L, Niaz E, Parker JM, Ross DC, Scott DM, Semryck B, Takla K, Tiramdas A, Upputuru SK, Pollenz RS.	Microbiol Resour Announc	10.1128/mra.00578-24	2024
	Genome sequences of six cluster CT and two cluster DJ bacteriophages that infect Gordonia rubripertincta.	Rodriguez XF, Williams DC, Chia CP.	Microbiol Resour Announc	10.1128/mra.00736-23	2023
Pathogenicity	Annotation of Secretariat and Hydrus, two DJ cluster phages isolated on Gordonia rubripertincta.	Bland J, Miller S, Algarin-Martinez ED, Biggs AM, Cavasini MED, Chase MA, Coleman C, Correa V, Danielson DF, Dean WR, French JL, Horne ME, Macumber BM, Martini FK, Mazzei SG, McGarrah CEE, Odegaard O, Parameswaran IS, Quarterman C, Rand TM, Ruiz-Houston KM, Sciacchitano AR, Seidensticker NS, Soltys A, Terron-Osorio AE, Todd AL, Wood AR, Ungrey MD, Pollenz RS.	Microbiol Resour Announc	10.1128/mra.00623-23	2023
	Isolation and Annotation of Azira, a CT Cluster Phage That Infects Gordonia rubripertincta.	McGarrah CEE, Algarin-Martinez ED, Cavasini MED, Correa V, Danielson DF, Dean WR, French JL, Gaskin NN, Jain U, Janvier J, Macumber BM, Martini FK, Mazzei SG, Mujica JM, Odegaard O, Quaterman C, Rand TM, Seidensticker NS, Serrano T, Soltys A, Ungrey MD, Pollenz RS.	Microbiol Resour Announc	10.1128/mra.00347-23	2023
	From Cullowhee Creek to Conley: genome sequence and annotation of a cluster DJ Gordonia phage.	Andro MN, Cansler AJ, Conley OS, Cruz NO, Dionne JA, Edwards JI, Furtuna D, Green CJ, Huber M, Hudson GJ, Humphries IR, Karazin AA, Mombille PI, Pell MM, Shickle G, Shipp ZJ, Timmons CA, Trembush JI, Turnmire CD, Yemofio NY, Burleson MD, Gainey MD.	Microbiol Resour Announc	10.1128/mra.01176-23	2024
	Genome Sequence of Gordonia rubripertincta Phage Survivors, a Cluster CT Siphovirus.	Amend AM, Bifone JP, Brewer JC, Denton MN, Gilbert EB, Grimm AC, Hogan JM, Kelley RM, Kelly-Brooner LJ, Mukerji JA, Osterhoudt M, Senn CR, Smith BR, Stillwell OG, Vo J, Watt DK, Connerly PL, Rueschhoff EE.	Microbiol Resour Announc	10.1128/mra.01086-22	2023
Genetics	Genome sequences of actinobacteriophages JorRay, Blocker23, Nibbles, and OlgasClover.	Baumgartner BM, Bono KA, McIntosh DR, Vu AM, Adams CF, Benik BC, Chavez J, Gresky SJ, Sotelo A, Ray JI, Peister A, Kimberley KW, McKenna CC, Theoret JR, Yoon EJ, Windsor EJ.	Microbiol Resour Announc	10.1128/mra.01256-23	2024
	Genome Sequences of Two Gordonia rubripertincta Cluster DJ Bacteriophages, Pherobrine and Burley.	Adams AJ, Bell M, Bennett MJ, Chaudhry UN, Daniels JN, Herman JE, Oh SA, Parra F, Reagan CR, Zareiesfandabadi B, Fogarty MP.	Microbiol Resour Announc	10.1128/mra.01024-22	2022
	Complete Genome Sequences of Chop, DelRio, and GrandSlam, Three Gordonia Phages Isolated from Soil in Central Arkansas.	Mathes HN, Christenson EI, Crum JH, Edmondson EM, Gray KE, Lawson LW, Lee LE, Lee MP, Lipscomb JA, Masengale ME, Matthews HG, McClain CM, Melton TN, Morrow TH, Perry AM, Rainwater DR, Renois GE, Rettig MF, Troup DC, Wilson AJ, Reyna NS, Plymale R.	Microbiol Resour Announc	10.1128/mra.00023-23	2023
	Bioinformatic characterization of endolysins and holin-like membrane proteins in the lysis cassette of phages that infect Gordonia rubripertincta.	Pollenz RS, Bland J, Pope WH.	PLoS One	10.1371/journal.pone.0276603	2022
Phylogeny	BlueFeather, the singleton that wasn't: Shared gene content analysis supports expansion of Arthrobacter phage Cluster FE.	Demo S, Kapinos A, Bernardino A, Guardino K, Hobbs B, Hoh K, Lee E, Vuong I, Reddi K, Freise AC, Moberg Parker J.	PLoS One	10.1371/journal.pone.0248418	2021
Genetics	Genome Sequences of Gordonia rubripertincta Bacteriophages AnarQue and Figliar.	Curran E, Callaway SE, Dumanlang RR, Harshaw AV, Palacio PN, Nakamura Y, Kimberley KW, Theoret JR, Yoon EJ, Windsor EJ, McKenna CC	Microbiol Resour Announc	10.1128/mra.01085-21	2022
Genetics	Genome Sequence of VanLee, a Singleton Actinobacteriophage That Infects Multiple Gordonia Strains.	Franco V, Barnhill K, Biggs A, Bland J, Choudhary H, Crogan T, Finocchiaro A, Fuller T, Hanwacker C, Howard Z, Iqbal M, Mathew A, Miller S, Padhye S, Rainey E, Rodriguez A, Stewart E, Chase M, Otero L, Pollenz RS	Microbiol Resour Announc	10.1128/MRA.00519-21	2021
Genetics	Genome Sequences of Gordonia Bacteriophages Jodelie19, BlingBling, and Burnsey.	Harrington DL, Barten HR, Audannio EI, Bragg FA, Garcia KA, Niswonger KM, MacAllister JR, McCarroll AM, O'Sullivan DM, Torres SE, Stanley CD, Yalzadeh D, Kimberley KW, McKenna CC, Theoret JR, Yoon EJ, Windsor EJ	Microbiol Resour Announc	10.1128/MRA.01280-20	2021
Genetics	Genome Sequences of Gordonia rubripertincta Bacteriophages Jellybones and NHagos.	Harrington DL, Stevens JL, Johnson MJ, Pochiro SJ, Moriarty MM, Robertson ME, Sanchez A, Whitby OG, Kimberley KW, McKenna CC, Theoret JR, Windsor EJ, Yoon EJ	Microbiol Resour Announc	10.1128/MRA.00935-20	2020
Genetics	Complete Genome Sequences of Genamy16 and NovaSharks, Two Gordonia rubripertincta Bacteriophages Isolated from Soil in Southeastern Florida.	Torruellas Garcia J, Ballarin S, Balusa N, Bell M, Caballero S, Chan J, Farez M, Guillen-Tapia A, Parent K, Pierre-Louis N, Polishuk V, Soni B, Subramanian S, Crump K	Microbiol Resour Announc	10.1128/mra.00973-22	2022
Genetics	Complete Genome Sequence of Gordonia rubripertincta Bacteriophage Hexbug Suggests Potential for a New CT Subcluster.	Barszczak DJ, Allison MJ, Cai Y, Forman L, Goldstein JM, Hakimjee SM, Scapicchio MT, Torres R, Gavin HE	Microbiol Resour Announc	10.1128/mra.00773-22	2022
Phylogeny	Genome Characteristics of Vardy, a Cluster DJ Actinobacteriophage Isolated on Gordonia rubripertincta in Western North Carolina.	Henson M, Fratarcangeli M, Park S, Minot A, Gainey MD	Microbiol Resour Announc	10.1128/mra.00704-22	2022
Genetics	Genome Sequence of CaiB, a DR Cluster Actinobacteriophage That Infects Gordonia rubripertincta.	Welsh B, Abdalla NM, Aldana E, Alvarado Fernandez VM, Arenales Salgado de Oliveira B, Fakhre D, Haymond AJ, Helton KM, Kanchibhatta A, Knight J, Marshall S, Martinez MLN, Merkher A, Morrow SE, Nguyen KP, Patel JJ, Patel SR, Rayala P, Ruiz-Houston KM, Satardekar AP, Shaikh SM, Terron Osorio AE, Weitz RC, Otero L, Pollenz RS	Microbiol Resour Announc	10.1128/mra.00376-22	2022

References

#10904	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43248
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#38434	; Curators of the CIP;
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#122293	Collection of Institut Pasteur ; Curators of the CIP; CIP 100848
#124042	Johannes Wittmann, Clara Rolland, Lorenz Reimer, Joaquim Sardà: PhageDive .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Gordonia rubripertincta (DSM 43248, ATCC 25593, CIP 100848)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Observation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API coryne

API zym

API biotype100

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Phages

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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