Name: Succinispira mobilis 19gly1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 105

Type strain:

Species: Succinispira mobilis

Strain Designation: 19gly1

Culture col. no.: DSM 6222

Strain history: <- P.H. Janssen, 19gly1 (Campylobacter sp.)

NCBI tax ID(s): 1069080 (strain), 78120 (species)

SI-ID 46257

ATCC 700845, DSM 6222

Section

Succinispira mobilis 19gly1 is an anaerobe, chemoorganotroph, mesophilic bacterium that was isolated from anaerobic solids digester.

Gram-negative
motile
vibrio-shaped
anaerobe
chemoorganotroph
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Negativicutes*
	Order	*Acidaminococcales*
	Family	*Acidaminococcaceae*
	Genus	*Succinispira*
	Species	**Succinispira mobilis**
	Full Scientific Name (LPSN)	Succinispira mobilis Janssen and O'Farrell 1999

Information on morphological and physiological properties Morphology

[Ref.: #22967]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.405

[Ref.: #22967]	Cell length	2.0-10.0 µm

[Ref.: #22967]	Cell width	0.5 µm

[Ref.: #22967]	Cell shape	vibrio-shaped

[Ref.: #22967]	Motility	yes
[Ref.: #69480]	Motility	yes Confidence in %92.821

[Ref.: #22967]

Colony color

white

Information on culture and growth conditions Culture and growth conditions

[Ref.: #2544]

Culture medium

CLOSTRIDIUM (GV) MEDIUM (DSMZ Medium 500)

[Ref.: #2544]

Culture medium growth

[Ref.: #2544]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2544]

Culture medium composition

expand / minimize

	Kind of temperature		Temperature
[Ref.: #2544]		growth	35 °C
[Ref.: #22967]	no	growth	40.0 °C
[Ref.: #22967]		optimum	37.0 °C

[Ref.: #2544]	Temperature range	mesophilic
[Ref.: #22967]	Temperature range	thermophilic
[Ref.: #22967]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #22967]			optimum	7.4-7.7
[Ref.: #22967]			growth	6.7-8.5

Information on physiology and metabolism Physiology and metabolism

[Ref.: #2544]	Oxygen tolerance	anaerobe
[Ref.: #22967]	Oxygen tolerance	obligate anaerobe
[Ref.: #69480]	Oxygen tolerance	anaerobe Confidence in %99.999

[Ref.: #22967]

Nutrition type

chemoorganotroph

[Ref.: #22967]	Ability of spore formation	no
[Ref.: #69480]	Ability of spore formation	no Confidence in %95.247

	Salt	Tested relation		Salt conc.
[Ref.: #22967]	NaCl		growth	0.2	g/L
[Ref.: #22967]	NaCl		growth	19.0	g/L
[Ref.: #22967]	NaCl	no	growth	24.0	g/L

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #22967]	aspartate ChEBI	+	fermentation
[Ref.: #22967]	citrate ChEBI	+	fermentation
[Ref.: #22967]	elemental sulfur ChEBI	-	electron acceptor
[Ref.: #22967]	esculin ChEBI	-	hydrolysis
[Ref.: #22967]	fumarate ChEBI	-	electron acceptor
[Ref.: #22967]	fumarate ChEBI	+	fermentation
[Ref.: #22967]	L-glutamate ChEBI	+	fermentation
[Ref.: #22967]	maleic acid ChEBI	+	fermentation
[Ref.: #22967]	nitrate ChEBI	-	electron acceptor
[Ref.: #22967]	oxaloacetate ChEBI	+	fermentation
[Ref.: #22967]	pyruvate ChEBI	+	fermentation
[Ref.: #22967]	succinate ChEBI	+	fermentation
[Ref.: #22967]	sulfate ChEBI	-	electron acceptor
[Ref.: #22967]	thiosulfate ChEBI	-	electron acceptor
[Ref.: #22967]	urea ChEBI	-	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #22967]		cytochrome ChEBI	no
[Ref.: #22967]		indole ChEBI	no

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #22967]		hydrogenase	+	1.12.99.6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #2544]	Sample type/isolated from	anaerobic solids digester
[Ref.: #2544]	Geographic location (country and/or sea, region)	Hamilton
[Ref.: #2544]	Country	New Zealand
[Ref.: #2544]	Country ISO 3 Code	NZL
[Ref.: #2544]	Continent	Australia and Oceania

[Ref.: #22967]	Sample type/isolated from	mixed culture growing on glycolate, originally obtained from a pond receiving effluent from an anaerobic solids digester
* marker position based on {}

Isolation sources categories

#Engineered	#Biodegradation	#Anaerobic digestor
#Engineered	#Laboratory	#Lab enrichment
#Environmental	#Aquatic	#Pond (small)
#Condition	#Anoxic (anaerobic)	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AJ006980 (>99% sequence identity) for Succinispira mobilis subclade from Microbeatlas

Aquatic Samples	5
Soil Samples
Animal Samples	3
Plant Samples
Total Samples	8

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #2544]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #2544]	Succinispira mobilis 16S rRNA gene	AJ006980	1495	ENA	78120 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Succinispira mobilis DSM 6222	GCA_000384135	scaffold	GenBank	1069080 tax ID	*
[Ref.: #66792]	Succinispira mobilis DSM 6222	1069080.9	wgs	PATRIC	1069080 tax ID	*
[Ref.: #66792]	Succinispira mobilis DSM 6222	2517093043	draft	JGI IMG/M	1069080 tax ID	*

[Ref.: #2544]	GC-content	36.0 mol%
[Ref.: #22967]	GC-content	36 mol%	thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Succinispira mobilis DSM 6222 DSM 6222 NCBI: GCA_000384135.1
[Ref.: #69481]	spore-forming	no	89	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Succinispira mobilis DSM 6222 DSM 6222 NCBI: GCA_000384135.1
[Ref.: #69480]	motile	yes	88.293	yes
[Ref.: #69480]	flagellated	no	60.323	no
[Ref.: #69480]	gram-positive	no	97.043	yes
[Ref.: #69480]	anaerobic	yes	99.999	no
[Ref.: #69480]	aerobic	no	97.97	no
[Ref.: #69480]	halophile	no	93.993	yes
[Ref.: #69480]	spore-forming	no	79.533	yes
[Ref.: #69480]	thermophile	no	92.877	no
[Ref.: #69480]	glucose-util	yes	51.047	no
[Ref.: #69480]	glucose-ferment	no	65.124	no

Availability in culture collections External links

[Ref.: #2544]

Culture collection no.

DSM 6222

[Ref.: #69788]

SI-ID 46257

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Succinispira mobilis gen. nov., sp. nov., a succinate-decarboxylating anaerobic bacterium.	Janssen PH, O'Farrell KA	Int J Syst Bacteriol	10.1099/00207713-49-3-1009	1999	*

References

#2544

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6222

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#22967

Peter H. Janssen,Katrina A. O'Farrell: Succinispira mobilis gen. nov., sp. nov., a succinate-decarboxylating anaerobic bacterium. IJSEM 49: 1009 - 1013 1999 ( DOI 10.1099/00207713-49-3-1009 , PubMed 10425757 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#69788

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID46257.1 )

* These data were automatically processed and therefore are not curated

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Succinispira mobilis DSM 6222 DSM 6222

Succinispira mobilis DSM 6222 DSM 6222

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