Neisseria sicca Berger 6b is a microaerophile, mesophilic, Gram-negative prokaryote that was isolated from pharyngeal mucosa.
Gram-negative coccus-shaped microaerophile mesophilic genome sequence 16S sequence| @ref 20215 |
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| Domain Pseudomonadati |
| Phylum Pseudomonadota |
| Class Betaproteobacteria |
| Order Neisseriales |
| Family Neisseriaceae |
| Genus Neisseria |
| Species Neisseria sicca |
| Full scientific name Neisseria sicca (von Lingelsheim 1908) Bergey et al. 1923 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 7155 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 36569 | MEDIUM 6 - Columbia agar with 10 % horse blood | Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml) | |||
| 122600 | CIP Medium 6 | Medium recipe at CIP |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68377 | 15824 ChEBI | D-fructose | + | builds acid from | from API NH |
| 68377 | 17634 ChEBI | D-glucose | + | builds acid from | from API NH |
| 68377 | 17306 ChEBI | maltose | + | builds acid from | from API NH |
| 122600 | 17632 ChEBI | nitrate | - | reduction | |
| 122600 | 16301 ChEBI | nitrite | + | reduction | |
| 68377 | 18257 ChEBI | ornithine | - | degradation | from API NH |
| 122600 | 35020 ChEBI | tributyrin | - | hydrolysis | |
| 68377 | 27897 ChEBI | tryptophan | - | energy source | from API NH |
| 68377 | 16199 ChEBI | urea | - | hydrolysis | from API NH |
| @ref | Metabolite | Is antibiotic | Is sensitive | Is resistant | |
|---|---|---|---|---|---|
| 122600 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 122600 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68377 | alkaline phosphatase | - | 3.1.3.1 | from API NH |
| 122600 | beta-galactosidase | - | 3.2.1.23 | |
| 7155 | catalase | + | 1.11.1.6 | |
| 122600 | catalase | + | 1.11.1.6 | |
| 7155 | cytochrome-c oxidase | + | 1.9.3.1 | |
| 122600 | DNase | - | ||
| 122600 | gamma-glutamyltransferase | + | 2.3.2.2 | |
| 68377 | lipase | - | from API NH | |
| 122600 | lysine decarboxylase | - | 4.1.1.18 | |
| 122600 | ornithine decarboxylase | - | 4.1.1.17 | |
| 68377 | ornithine decarboxylase | - | 4.1.1.17 | from API NH |
| 122600 | oxidase | + | ||
| 68377 | proline-arylamidase | + | 3.4.11.5 | from API NH |
| 68377 | tryptophan deaminase | - | 4.1.99.1 | from API NH |
| 122600 | urease | - | 3.5.1.5 | |
| 68377 | urease | - | 3.5.1.5 | from API NH |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | L-lactaldehyde degradation | 100 | 3 of 3 | ||
| 66794 | methylglyoxal degradation | 100 | 5 of 5 | ||
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | formaldehyde oxidation | 100 | 3 of 3 | ||
| 66794 | ubiquinone biosynthesis | 100 | 7 of 7 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | denitrification | 100 | 2 of 2 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | lipid A biosynthesis | 88.89 | 8 of 9 | ||
| 66794 | valine metabolism | 88.89 | 8 of 9 | ||
| 66794 | reductive acetyl coenzyme A pathway | 85.71 | 6 of 7 | ||
| 66794 | tetrahydrofolate metabolism | 85.71 | 12 of 14 | ||
| 66794 | photosynthesis | 85.71 | 12 of 14 | ||
| 66794 | phenylalanine metabolism | 84.62 | 11 of 13 | ||
| 66794 | NAD metabolism | 83.33 | 15 of 18 | ||
| 66794 | pentose phosphate pathway | 81.82 | 9 of 11 | ||
| 66794 | peptidoglycan biosynthesis | 80 | 12 of 15 | ||
| 66794 | threonine metabolism | 80 | 8 of 10 | ||
| 66794 | Entner Doudoroff pathway | 80 | 8 of 10 | ||
| 66794 | aspartate and asparagine metabolism | 77.78 | 7 of 9 | ||
| 66794 | vitamin B1 metabolism | 76.92 | 10 of 13 | ||
| 66794 | biotin biosynthesis | 75 | 3 of 4 | ||
| 66794 | CMP-KDO biosynthesis | 75 | 3 of 4 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 75 | 6 of 8 | ||
| 66794 | glycogen biosynthesis | 75 | 3 of 4 | ||
| 66794 | acetate fermentation | 75 | 3 of 4 | ||
| 66794 | C4 and CAM-carbon fixation | 75 | 6 of 8 | ||
| 66794 | gluconeogenesis | 75 | 6 of 8 | ||
| 66794 | isoleucine metabolism | 75 | 6 of 8 | ||
| 66794 | vitamin B6 metabolism | 72.73 | 8 of 11 | ||
| 66794 | heme metabolism | 71.43 | 10 of 14 | ||
| 66794 | cardiolipin biosynthesis | 71.43 | 5 of 7 | ||
| 66794 | purine metabolism | 69.15 | 65 of 94 | ||
| 66794 | serine metabolism | 66.67 | 6 of 9 | ||
| 66794 | acetoin degradation | 66.67 | 2 of 3 | ||
| 66794 | octane oxidation | 66.67 | 2 of 3 | ||
| 66794 | flavin biosynthesis | 66.67 | 10 of 15 | ||
| 66794 | d-mannose degradation | 66.67 | 6 of 9 | ||
| 66794 | alanine metabolism | 65.52 | 19 of 29 | ||
| 66794 | glutamate and glutamine metabolism | 64.29 | 18 of 28 | ||
| 66794 | proline metabolism | 63.64 | 7 of 11 | ||
| 66794 | methionine metabolism | 61.54 | 16 of 26 | ||
| 66794 | isoprenoid biosynthesis | 61.54 | 16 of 26 | ||
| 66794 | leucine metabolism | 61.54 | 8 of 13 | ||
| 66794 | lipoate biosynthesis | 60 | 3 of 5 | ||
| 66794 | glycogen metabolism | 60 | 3 of 5 | ||
| 66794 | starch degradation | 60 | 6 of 10 | ||
| 66794 | hydrogen production | 60 | 3 of 5 | ||
| 66794 | glycolysis | 58.82 | 10 of 17 | ||
| 66794 | tryptophan metabolism | 57.89 | 22 of 38 | ||
| 66794 | glutathione metabolism | 57.14 | 8 of 14 | ||
| 66794 | citric acid cycle | 57.14 | 8 of 14 | ||
| 66794 | degradation of sugar alcohols | 56.25 | 9 of 16 | ||
| 66794 | cysteine metabolism | 55.56 | 10 of 18 | ||
| 66794 | non-pathway related | 55.26 | 21 of 38 | ||
| 66794 | pyrimidine metabolism | 53.33 | 24 of 45 | ||
| 66794 | dTDPLrhamnose biosynthesis | 50 | 4 of 8 | ||
| 66794 | suberin monomers biosynthesis | 50 | 1 of 2 | ||
| 66794 | ethanol fermentation | 50 | 1 of 2 | ||
| 66794 | propionate fermentation | 50 | 5 of 10 | ||
| 66794 | cyclohexanol degradation | 50 | 2 of 4 | ||
| 66794 | sulfopterin metabolism | 50 | 2 of 4 | ||
| 66794 | phenylmercury acetate degradation | 50 | 1 of 2 | ||
| 66794 | butanoate fermentation | 50 | 2 of 4 | ||
| 66794 | lysine metabolism | 50 | 21 of 42 | ||
| 66794 | adipate degradation | 50 | 1 of 2 | ||
| 66794 | ketogluconate metabolism | 50 | 4 of 8 | ||
| 66794 | oxidative phosphorylation | 48.35 | 44 of 91 | ||
| 66794 | histidine metabolism | 48.28 | 14 of 29 | ||
| 66794 | sulfate reduction | 46.15 | 6 of 13 | ||
| 66794 | arginine metabolism | 45.83 | 11 of 24 | ||
| 66794 | metabolism of disaccharids | 45.45 | 5 of 11 | ||
| 66794 | CO2 fixation in Crenarchaeota | 44.44 | 4 of 9 | ||
| 66794 | propanol degradation | 42.86 | 3 of 7 | ||
| 66794 | tyrosine metabolism | 42.86 | 6 of 14 | ||
| 66794 | arachidonate biosynthesis | 40 | 2 of 5 | ||
| 66794 | myo-inositol biosynthesis | 40 | 4 of 10 | ||
| 66794 | glycine betaine biosynthesis | 40 | 2 of 5 | ||
| 66794 | glycine metabolism | 40 | 4 of 10 | ||
| 66794 | lipid metabolism | 38.71 | 12 of 31 | ||
| 66794 | urea cycle | 38.46 | 5 of 13 | ||
| 66794 | cyanate degradation | 33.33 | 1 of 3 | ||
| 66794 | acetyl CoA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | glycolate and glyoxylate degradation | 33.33 | 2 of 6 | ||
| 66794 | pantothenate biosynthesis | 33.33 | 2 of 6 | ||
| 66794 | molybdenum cofactor biosynthesis | 33.33 | 3 of 9 | ||
| 66794 | (5R)-carbapenem carboxylate biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | selenocysteine biosynthesis | 33.33 | 2 of 6 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 33.33 | 4 of 12 | ||
| 66794 | enterobactin biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | phenylpropanoid biosynthesis | 30.77 | 4 of 13 | ||
| 66794 | coenzyme M biosynthesis | 30 | 3 of 10 | ||
| 66794 | chlorophyll metabolism | 27.78 | 5 of 18 | ||
| 66794 | d-xylose degradation | 27.27 | 3 of 11 | ||
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 27.27 | 3 of 11 | ||
| 66794 | cholesterol biosynthesis | 27.27 | 3 of 11 | ||
| 66794 | alginate biosynthesis | 25 | 1 of 4 | ||
| 66794 | degradation of pentoses | 25 | 7 of 28 | ||
| 66794 | lactate fermentation | 25 | 1 of 4 | ||
| 66794 | vitamin E metabolism | 25 | 1 of 4 | ||
| 66794 | phosphatidylethanolamine bioynthesis | 23.08 | 3 of 13 | ||
| 66794 | carotenoid biosynthesis | 22.73 | 5 of 22 | ||
| 66794 | nitrate assimilation | 22.22 | 2 of 9 | ||
| 66794 | degradation of hexoses | 22.22 | 4 of 18 |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM1405494v1 assembly for Neisseria sicca DSM 17713 | complete | 490 | 99.18 | ||||
| 66792 | ASM1933476v1 assembly for Neisseria sicca ATCC 29256 | complete | 547045 | 97.86 | ||||
| 66792 | ASM17465v1 assembly for Neisseria sicca ATCC 29256 | contig | 547045 | 65.35 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 7155 | Neisseria sicca 16S rRNA gene, partial | AJ247248 | 457 | 547045 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 99.10 | no |
| 125439 | motility | BacteriaNetⓘ | no | 88.10 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 90.40 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | microaerophile | 98.00 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 99.00 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 92.36 | no |
| 125438 | aerobic | aerobicⓘ | no | 59.23 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 92.72 | no |
| 125438 | thermophilic | thermophileⓘ | no | 98.50 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 87.50 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phylogeny | Confirmation of the Need for Reclassification of Neisseria mucosa and Neisseria sicca Using Average Nucleotide Identity Blast and Phylogenetic Analysis of Whole-Genome Sequencing: Hinted by Clinical Misclassification of a Neisseria mucosa Strain. | Jin Y, Xu H, Yao Q, Gu B, Wang Z, Wang T, Yu X, Lu Y, Zheng B, Zhang Y. | Front Microbiol | 10.3389/fmicb.2021.780183 | 2021 | |
| Diversity of the type VI secretion systems in the Neisseria spp. | Calder A, Snyder LAS. | Microb Genom | 10.1099/mgen.0.000986 | 2023 | ||
| Phylogeny | Full-length 16S rRNA gene sequencing by PacBio improves taxonomic resolution in human microbiome samples. | Buetas E, Jordan-Lopez M, Lopez-Roldan A, D'Auria G, Martinez-Priego L, De Marco G, Carda-Dieguez M, Mira A. | BMC Genomics | 10.1186/s12864-024-10213-5 | 2024 | |
| Enzymology | Microbiological evaluation of the new VITEK 2 Neisseria-Haemophilus identification card. | Valenza G, Ruoff C, Vogel U, Frosch M, Abele-Horn M. | J Clin Microbiol | 10.1128/jcm.00953-07 | 2007 | |
| Commensal Neisseria Inhibit Porphyromonas Gingivalis Invasion of Gingival Epithelial Cells. | Fukuda S, Akatsu T, Fujii A, Kawano S, Minegishi Y, Ota N. | Oral Health Prev Dent | 10.3290/j.ohpd.b5866430 | 2024 | ||
| Neisseria sicca and Corynebacterium matruchotii inhibited oral squamous cell carcinomas by regulating genome stability. | Shen X, Zhang B, Hu X, Li J, Wu M, Yan C, Yang Y, Li Y. | Bioengineered | 10.1080/21655979.2022.2078556 | 2022 | ||
| Bacteriocin-like peptides encoded by a horizontally acquired island mediate Neisseria gonorrhoeae autolysis. | Poncin K, McKeand SA, Lavender H, Kurzyp K, Harrison OB, Roberti A, Melia C, Johnson E, Maiden MCJ, Greaves DR, Exley R, Tang CM. | PLoS Biol | 10.1371/journal.pbio.3003001 | 2025 | ||
| Genomic and phenotypic characterization of Streptococcus mutans isolates suggests key gene clusters in regulating its interaction with Streptococcus gordonii. | Liu S, Sun Y, Liu Y, Hu F, Xu L, Zheng Q, Wang Q, Zeng G, Zhang K. | Front Microbiol | 10.3389/fmicb.2022.945108 | 2022 | ||
| Neisseria sicca Endocarditis Complicated by Intracranial and Popliteal Aneurysms in a Patient with a Bicuspid Aortic Valve. | Debellemaniere G, Chirouze C, Hustache-Mathieu L, Fournier D, Biondi A, Hoen B. | Case Rep Infect Dis | 10.1155/2013/895138 | 2013 | ||
| Metabolism | Metabolic property of acetaldehyde production from ethanol and glucose by oral Streptococcus and Neisseria. | Tagaino R, Washio J, Abiko Y, Tanda N, Sasaki K, Takahashi N. | Sci Rep | 10.1038/s41598-019-46790-9 | 2019 | |
| Neisseria infection of rhesus macaques as a model to study colonization, transmission, persistence, and horizontal gene transfer. | Weyand NJ, Wertheimer AM, Hobbs TR, Sisko JL, Taku NA, Gregston LD, Clary S, Higashi DL, Biais N, Brown LM, Planer SL, Legasse AW, Axthelm MK, Wong SW, So M. | Proc Natl Acad Sci U S A | 10.1073/pnas.1217420110 | 2013 | ||
| Metabolism | Biochemical and genomic analysis of the denitrification pathway within the genus Neisseria. | Barth KR, Isabella VM, Clark VL. | Microbiology (Reading) | 10.1099/mic.0.032961-0 | 2009 | |
| Pathogenicity | Molecular Assay for Detection of Genetic Markers Associated with Decreased Susceptibility to Cephalosporins in Neisseria gonorrhoeae. | Peterson SW, Martin I, Demczuk W, Bharat A, Hoang L, Wylie J, Allen V, Lefebvre B, Tyrrell G, Horsman G, Haldane D, Garceau R, Wong T, Mulvey MR. | J Clin Microbiol | 10.1128/jcm.00493-15 | 2015 | |
| Metabolism | Insights into methyltransferase specificity and bioactivity of derivatives of the antibiotic plantazolicin. | Hao Y, Saint-Vincent PMB, Sharma A, Mitchell DA, Nair SK. | ACS Chem Biol | 10.1021/cb501042a | 2015 | |
| Envelope proteins in Neisseria. | Russell RR, Johnson KG, McDonald IJ. | Can J Microbiol | 10.1139/m75-224 | 1975 | ||
| Enzymology | Enhancing the specificity of the COBAS AMPLICOR CT/NG test for Neisseria gonorrhoeae by retesting specimens with equivocal results. | Van Der Pol B, Martin DH, Schachter J, Quinn TC, Gaydos CA, Jones RB, Crotchfelt K, Moncada J, Jungkind D, Turner B, Peyton C, Kelly JF, Weiss JB, Rosenstraus M. | J Clin Microbiol | 10.1128/jcm.39.9.3092-3098.2001 | 2001 | |
| Genetics | Correction of sequence-dependent ambiguous bases (Ns) from the 454 pyrosequencing system. | Shin S, Park J. | Nucleic Acids Res | 10.1093/nar/gku070 | 2014 | |
| Genome sequencing reveals widespread virulence gene exchange among human Neisseria species. | Marri PR, Paniscus M, Weyand NJ, Rendon MA, Calton CM, Hernandez DR, Higashi DL, Sodergren E, Weinstock GM, Rounsley SD, So M. | PLoS One | 10.1371/journal.pone.0011835 | 2010 | ||
| Diagnostic value of interactions between members of the family Neisseriaceae and lectins. | Doyle RJ, Nedjat-Haiem F, Keller KF, Frasch CE. | J Clin Microbiol | 10.1128/jcm.19.3.383-387.1984 | 1984 | ||
| Molecular and virulence characteristics of an outer membrane-associated RTX exoprotein in Pasteurella pneumotropica. | Sasaki H, Ishikawa H, Sato T, Sekiguchi S, Amao H, Kawamoto E, Matsumoto T, Shirama K. | BMC Microbiol | 10.1186/1471-2180-11-55 | 2011 | ||
| Comparison of Efficacy and Safety Profiles Between Omadacycline and Moxifloxacin in Elderly Patients with Community-Acquired Pneumonia: A Randomized, Controlled Trial. | Yu M, Wang X, Wu S, Zhou Z, Liu Y, Chai Y. | Clin Pharmacol Drug Dev | 10.1002/cpdd.1627 | 2025 | ||
| A Case Report of Neisseria sicca Endocarditis in a Patient with Tissue Aortic Valve: Favorable Outcome Following Prompt Multidisciplinary Team Management. | Jamil H, Ezzo T, Doumi A, Diab ZAE, Saleem A. | Br J Hosp Med (Lond) | 10.12968/hmed.2024.0774 | 2025 | ||
| Native Aortic Valve Endocarditis Caused by Rothia mucilaginosa, Initially Misidentified as Neisseria sicca. | Liu TS, Scro A, Awayda M, Bou Zerdan M. | Am J Case Rep | 10.12659/ajcr.948231 | 2025 | ||
| Genetics | Neisseria sicca Bloodstream Infection in a Patient with Aortic Valve Replacement: Case Report and Genomic Analysis. | Wang Y. | Infect Drug Resist | 10.2147/idr.s552728 | 2025 | |
| Peritoneal dialysis-associated peritonitis caused by Neisseria.sicca: A case report and literature review. | Zhang M, Zhang X, Yin X, Li G, Yang T, Xie D, Chen C. | Indian J Med Microbiol | 10.1016/j.ijmmb.2024.100566 | 2024 | ||
| The metagenome and metabolome signatures of dental biofilms associated with severe dental fluorosis. | Ajrithirong P, Krasaesin A, Sriarj W, Gavila P, Chetruengchai W, Sriwattanapong K, Manaspon C, Samaranayake L, Porntaveetus T. | J Oral Microbiol | 10.1080/20002297.2025.2560591 | 2025 | ||
| A Rare Case of Peritoneal Dialysis-Associated Peritonitis Caused by Neisseria sicca. | Bandi PS, Brar A, Al-Handola R, Navari Y, Osterholzer D. | Cureus | 10.7759/cureus.59358 | 2024 | ||
| Neisseria sicca Vertebral Osteomyelitis: A Case Report and Literature Review. | Dyal NP, Orenstein R, Nagarakanti SR. | J Clin Med | 10.3390/jcm13237241 | 2024 | ||
| Infective Endocarditis Caused by Neisseria Sicca Species 10 Years After Mechanical Aortic Valve Implantation. | Cheng Q, Zhou X, Wang P, Liu R, Liu Q. | Infect Drug Resist | 10.2147/idr.s467854 | 2024 | ||
| Rapid Griess assay (RGA): a chairside test for ex vivo semi-quantitative oral nitrite measurement and in vitro assessment of nitrite production by oral bacteria. | Mavropoulos SKB, Zaiton R, Basic A, Dahlen G. | J Oral Microbiol | 10.1080/20002297.2025.2517039 | 2025 | ||
| Metagenomic sequencing for identification of nontuberculous mycobacteria and other pathogens in patients with mixed infection of the lung | Yu J, Lv X, Wang Q, Gao M, Li W. | Front Cell Infect Microbiol | 2025 | |||
| Evaluation and comparison of microbial colonization on nickel titanium (NiTi) closed coil springs and active tie-backs during orthodontic space closure: An in-vivo study. | George G, Kumar KJ, Anjali K, Jacob SM, Manas G, Nayyar AS. | J Orthod Sci | 10.4103/jos.jos_102_24 | 2025 | ||
| Antimicrobial susceptibilities of oral Neisseria from men on HIV pre-exposure prophylaxis in Hanoi, Vietnam. | Dong HV, Adamson P, Pham DH, Pham QH, Le HHL, Pham LQ, Bui HTM, Le GM, Klausner JD. | J Glob Antimicrob Resist | 10.1016/j.jgar.2024.11.008 | 2025 | ||
| The effect of Beta vulgaris on an in vitro oral microbiome of electronic cigarette users. | Staton DV, Tang J, Barbisan M, Nussbaum J, Baker JL. | J Oral Microbiol | 10.1080/20002297.2025.2509669 | 2025 | ||
| Pacemaker lead-related endocarditis with Neisseria sicca. | Locke M, Smith A, Epstein LM, Niknam N, Boparai R. | BMJ Case Rep | 10.1136/bcr-2022-249795 | 2022 | ||
| A deep learning feature importance test framework for integrating informative high-dimensional biomarkers to improve disease outcome prediction. | Zou B, Xenakis JG, Xiao M, Ribeiro A, Divaris K, Wu D, Zou F. | Brief Bioinform | 10.1093/bib/bbae709 | 2024 | ||
| Presence of the blaTEM Gene in Commensal Neisseria spp.: A Possible Cause for the Acquired Drug Resistance Among Pathogenic Respiratory Bacteria. | Sunil A, Kumar K, Sridharan KS. | Cureus | 10.7759/cureus.49389 | 2023 | ||
| Peritoneal dialysis peritonitis due to Neisseria: clinicopathological features of 10 patients with a review of the literature. | Sun Y, Chen X, Ni J, Yu J. | Ren Fail | 10.1080/0886022x.2025.2466820 | 2025 | ||
| Demystifying the link between periodontitis and oral cancer: a systematic review integrating clinical, pre-clinical, and in vitro data. | Pigossi SC, Oliveira JA, de Medeiros MC, Soares LFF, D'Silva NJ. | Cancer Metastasis Rev | 10.1007/s10555-025-10285-z | 2025 | ||
| Genetics | Integrating metagenomics and cultivation unveils oral phage diversity and potential impact on hosts. | Jie Z, Liang H, Meng Y, Zhang J, Zhang T, Li W, Lin X, Hu T, Han M, Liang W, Ju Y, Tong X, Jin X, Xu X, Zhang W, Wang J, Yang H, Kristiansen K, Xiao L, Zou Y. | NPJ Biofilms Microbiomes | 10.1038/s41522-025-00773-z | 2025 | |
| Successful Pediatric Heart Transplantation from a Deceased Donor with SARS-Cov-2 Infection: A Case Report. | Bienjonetti-Boudreau D, Lamarre V, Diop MS, Tremblay L, Poirier N, Tucci M, Laroussi NA, Raboisson MJ. | Transplant Proc | 10.1016/j.transproceed.2023.06.010 | 2023 | ||
| Unexplored diversity and molecular genetic signatures of chimallin and phuz encoding phages. | Sun S, Li C, Sun J, Li X, Liu M, Li X, Liu K, Li H, Yu J, Zhou P, Wang L, Cai K, Ni W, Hu S. | BMC Genomics | 10.1186/s12864-025-12246-w | 2025 | ||
| Neisseria sicca: A Rare Cause of Bacterial Conjunctivitis. | Kozlova A, Palazzolo L, Michael A. | Am J Case Rep | 10.12659/ajcr.923135 | 2020 | ||
| Genetics | Emergence and evolution of mosaic penA-60 and penA-237 alleles in a Neisseria gonorrhoeae core genogroup that was historically susceptible to extended spectrum cephalosporins. | Thomas Iv JC, Cartee JC, Hebrank K, St Cyr SB, Schlanger K, Raphael BH, Kersh EN, Joseph SJ. | Front Microbiol | 10.3389/fmicb.2024.1401303 | 2024 | |
| A case of native tricuspid valve Neisseria mucosa/sicca species infective endocarditis complicated by septic pulmonary emboli. | Szendrey JA, Asghar A, Mokraoui N, Walker D. | IDCases | 10.1016/j.idcr.2023.e01850 | 2023 | ||
| The Molecular Interplay Between Oral Microbiome and Oral Cancer Pathogenesis. | Urzica RN, Cretu B, Caruntu A, Bucurica S, Farcasiu AT, Ciupescu LM, Scheau C, Caruntu C. | Int J Mol Sci | 10.3390/ijms262010212 | 2025 | ||
| Sequencing Methods to Study the Microbiome with Antibiotic Resistance Genes in Patients with Pulmonary Infections. | Dong T, Wang Y, Qi C, Fan W, Xie J, Chen H, Zhou H, Han X. | J Microbiol Biotechnol | 10.4014/jmb.2402.02004 | 2024 | ||
| Metabolomic profiles of obesity and subgingival microbiome in periodontally healthy individuals: A cross-sectional study. | Khocht A, Paster B, Lenoir L, Irani C, Fraser G. | J Clin Periodontol | 10.1111/jcpe.13860 | 2023 | ||
| Co-infection with Neisseria mucosa in a patient with tuberculous otitis media. | Hioki T, Soejima K, Goto Y, Sugiura M, Umemura T, Ishihara Y, Mutoh Y, Sakanashi D, Mikamo H. | J Otol | 10.1016/j.joto.2023.10.001 | 2024 | ||
| Genetics | Metagenomic Analysis of the Buccal Microbiome by Nanopore Sequencing Reveals Structural Differences in the Microbiome of a Patient with Molar Incisor Hypomineralization (MIH) Compared to a Healthy Child-Case Study. | Tynior W, Klosek M, Salatino S, Cuber P, Hudy D, Nalecz D, Chan YT, Gustave C, Strzelczyk JK. | Int J Mol Sci | 10.3390/ijms252313143 | 2024 | |
| The Relationship Between Bacterial Flora in Saliva and Esophageal Mucus and Endoscopic Severity in Patients with Eosinophilic Esophagitis. | Sasahira M, Matsumoto H, Go TT, Yo S, Monden S, Ninomiya T, Oosawa M, Handa O, Umegaki E, Inoue R, Shiotani A. | Int J Mol Sci | 10.3390/ijms26073026 | 2025 | ||
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| #7155 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17713 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #36569 | ; Curators of the CIP; |
| #47891 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 23929 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #68377 | Automatically annotated from API NH . |
| #122600 | Collection of Institut Pasteur ; Curators of the CIP; CIP 103345 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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