Strain identifier

BacDive ID: 8626

Type strain: Yes

Species: Malacoplasma microti

Strain Designation: IL371

Strain history: <- CCUG <- D. R. Brown; IL371

NCBI tax ID(s): 38746 (species)

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General

@ref: 8144

BacDive-ID: 8626

DSM-Number: 19518

keywords: 16S sequence, Bacteria, aerobe, mesophilic, animal pathogen

description: Malacoplasma microti IL371 is an aerobe, mesophilic animal pathogen that was isolated from lung tissue from prairie voles .

NCBI tax id

  • NCBI tax id: 38746
  • Matching level: species

strain history

  • @ref: 8144
  • history: <- CCUG <- D. R. Brown; IL371

doi: 10.13145/bacdive8626.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/mycoplasmatota
  • domain: Bacteria
  • phylum: Mycoplasmatota
  • class: Mollicutes
  • order: Mycoplasmoidales
  • family: Mycoplasmoidaceae
  • genus: Malacoplasma
  • species: Malacoplasma microti
  • full scientific name: Malacoplasma microti (Brown et al. 2001) Gupta et al. 2018

  • synonyms

    • @ref: 20215
    • synonym: Mycoplasma microti

@ref: 8144

domain: Bacteria

phylum: Tenericutes

class: Mollicutes

order: Mycoplasmatales

family: Mycoplasmoidaceae

genus: Malacoplasma

species: Malacoplasma microti

full scientific name: Malacoplasma microti (Brown et al. 2001) Gupta et al. 2018

strain designation: IL371

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 8144
  • name: SP4-Z MEDIUM (DSMZ Medium 1076b)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/1076b
  • composition: Name: SP4-Z MEDIUM (DSMZ Medium 1076b) Composition: Agar 10.0 g/l Tryptone 10.0 g/l Bacto peptone 5.0 g/l PPLO broth 3.5 g/l Urea 2.0 g/l Glucose 1.0 g/l None 1.0 g/l Yeast extract 0.4 g/l DNA 0.2 g/l CMRL 1066 Fetal bovine serum Swine serum Distilled water

culture temp

  • @ref: 8144
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 8144
  • oxygen tolerance: aerobe

Isolation, sampling and environmental information

isolation

@refsample typehost speciesgeographic locationcountryorigin.countrycontinent
8144lung tissue from prairie voles (Microtus ochrogaster)Microtus ochrogasterFloridaUSAUSANorth America
59823Prairie vole (Microtus ochrogaster)FloridaUSAUSANorth America

isolation source categories

Cat1Cat2Cat3
#Host#Mammals#Rodentia (Other)
#Host Body-Site#Oral cavity and airways#Lung

taxonmaps

  • @ref: 69479
  • File name: preview.99_41295.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_329;96_19185;97_23795;98_30065;99_41295&stattab=map
  • Last taxonomy: Mycoplasma microti subclade
  • 16S sequence: AF212859
  • Sequence Identity:
  • Total samples: 535
  • soil counts: 13
  • aquatic counts: 15
  • animal counts: 506
  • plant counts: 1

Safety information

risk assessment

  • @ref: 8144
  • pathogenicity animal: yes
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Mycoplasma microti strain ATCC 700935 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequenceAY755605849ena38746
8144Mycoplasma microti 16S ribosomal RNA gene, partial sequenceAF2128591435ena38746

External links

@ref: 8144

culture collection no.: DSM 19518, ATCC 700935, CCUG 53181

straininfo link

  • @ref: 78007
  • straininfo: 44215

literature

  • topic: Phylogeny
  • Pubmed-ID: 11321086
  • title: Mycoplasma microti sp. nov., isolated from the respiratory tract of prairie voles (Microtus ochrogaster).
  • authors: Brown DR, Talkington DF, Thacker WL, Brown MB, Dillehay DL, Tully JG
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/00207713-51-2-409
  • year: 2001
  • mesh: Animals, Arvicolinae/*microbiology, Bacterial Typing Techniques, DNA, Ribosomal/genetics, Molecular Sequence Data, Mycoplasma/*classification/isolation & purification, RNA, Ribosomal, 16S/genetics, Respiratory System/*microbiology, Terminology as Topic
  • topic2: Genetics

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
8144Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 19518)https://www.dsmz.de/collection/catalogue/details/culture/DSM-19518
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
59823Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 53181)https://www.ccug.se/strain?id=53181
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
78007Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID44215.1StrainInfo: A central database for resolving microbial strain identifiers