Strain identifier
BacDive ID: 8605
Type strain:
Species: Mycoplasmoides genitalium
Strain Designation: G37
Strain history: <- J. K. Davis; <- J. G. Tully; G37
NCBI tax ID(s): 2097 (species)
General
@ref: 8310
BacDive-ID: 8605
DSM-Number: 19775
keywords: 16S sequence, Bacteria, mesophilic
description: Mycoplasmoides genitalium G37 is a mesophilic bacterium that was isolated from urethra of male with non-gonococcal urethritis.
NCBI tax id
- NCBI tax id: 2097
- Matching level: species
strain history
- @ref: 8310
- history: <- J. K. Davis; <- J. G. Tully; G37
doi: 10.13145/bacdive8605.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/mycoplasmatota
- domain: Bacteria
- phylum: Mycoplasmatota
- class: Mollicutes
- order: Mycoplasmoidales
- family: Mycoplasmoidaceae
- genus: Mycoplasmoides
- species: Mycoplasmoides genitalium
- full scientific name: Mycoplasmoides genitalium (Tully et al. 1983) Gupta et al. 2018
synonyms
- @ref: 20215
- synonym: Mycoplasma genitalium
@ref: 8310
domain: Bacteria
phylum: Tenericutes
class: Mollicutes
order: Mycoplasmatales
family: Mycoplasmoidaceae
genus: Mycoplasmoides
species: Mycoplasmoides genitalium
full scientific name: Mycoplasmoides genitalium (Tully et al. 1983) Gupta et al. 2018
strain designation: G37
type strain: yes
Morphology
colony morphology
- @ref: 8310
- incubation period: 1-2 days
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
8310 | SP4-Z MEDIUM (DSMZ Medium 1076b) | yes | https://mediadive.dsmz.de/medium/1076b | Name: SP4-Z MEDIUM (DSMZ Medium 1076b) Composition: Agar 10.0 g/l Tryptone 10.0 g/l Bacto peptone 5.0 g/l PPLO broth 3.5 g/l Urea 2.0 g/l Glucose 1.0 g/l None 1.0 g/l Yeast extract 0.4 g/l DNA 0.2 g/l CMRL 1066 Fetal bovine serum Swine serum Distilled water |
40782 | MEDIUM 79 - for Mycoplasma | yes | Distilled water make up to (610.000 ml);Glucose (5.000 g);Peptone (5.300g);Tryptone (10.000 g);PPLO broth (0.500 g);Sterile supplement - M00265 (375.000 ml) |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
8310 | positive | growth | 37 | mesophilic |
40782 | positive | growth | 37 | mesophilic |
Isolation, sampling and environmental information
isolation
- @ref: 8310
- sample type: urethra of male with non-gonococcal urethritis
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Infection | #Disease | |
#Infection | #Patient | |
#Host Body-Site | #Urogenital tract | #Urethra |
#Host | #Human | #Male |
taxonmaps
- @ref: 69479
- File name: preview.99_2822.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_16526;96_307;97_341;98_385;99_2822&stattab=map
- Last taxonomy: Mycoplasma genitalium
- 16S sequence: X77334
- Sequence Identity:
- Total samples: 692
- soil counts: 3
- aquatic counts: 16
- animal counts: 671
- plant counts: 2
Safety information
risk assessment
- @ref: 8310
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20218 | Mycoplasma genitalium gene for 16S rRNA, partial sequence | AB069813 | 251 | ena | 2097 |
20218 | Mycoplasma genitalium strain ATCC 33530 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | AY816341 | 835 | ena | 2097 |
8310 | M.genitalium 16S rRNA gene | X77334 | 1490 | ena | 2097 |
External links
@ref: 8310
culture collection no.: DSM 19775, ATCC 33530
straininfo link
- @ref: 77988
- straininfo: 40546
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Metabolism | 23357772 | Contribution of topoisomerase IV mutation to quinolone resistance in Mycoplasma genitalium. | Yamaguchi Y, Takei M, Kishii R, Yasuda M, Deguchi T | Antimicrob Agents Chemother | 10.1128/AAC.01956-12 | 2013 | Anti-Bacterial Agents/*pharmacology, DNA Gyrase/genetics/metabolism, DNA Topoisomerase IV/*genetics/metabolism, Drug Resistance, Bacterial/genetics, Microbial Sensitivity Tests, Mutation, Mycoplasma genitalium/*drug effects/*enzymology/genetics, Polymerase Chain Reaction, Quinolones/*pharmacology | Enzymology |
Pathogenicity | 25245990 | Sitafloxacin: antimicrobial activity against ciprofloxacin-selected laboratory mutants of Mycoplasma genitalium and inhibitory activity against its DNA gyrase and topoisomerase IV. | Deguchi T, Kikuchi M, Yasuda M, Ito S | J Infect Chemother | 10.1016/j.jiac.2014.08.021 | 2014 | Anti-Bacterial Agents/*pharmacology, Ciprofloxacin/pharmacology, DNA Gyrase/drug effects, DNA Topoisomerase IV/drug effects, DNA, Bacterial/genetics, Drug Resistance, Bacterial, Fluoroquinolones/*pharmacology, Humans, Microbial Sensitivity Tests, Mutation/*genetics, Mycoplasma Infections/microbiology, Mycoplasma genitalium/*drug effects/*genetics, Topoisomerase II Inhibitors/*pharmacology |
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
8310 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 19775) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-19775 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
40782 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/15601 | ||||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
77988 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID40546.1 | StrainInfo: A central database for resolving microbial strain identifiers |