Strain identifier
BacDive ID: 8601
Type strain: 
Species: Mycoplasmoides fastidiosum
Strain Designation: 4822
Strain history: <- J. K. Davis {2007} <- J. G. Tully <- NCTC; NCTC 10180 <- MRLN <- R. M. Lemcke and J. Poland
NCBI tax ID(s): 92758 (species)
version 9.1 (current version)
General
@ref: 15479
BacDive-ID: 8601
DSM-Number: 21204
keywords: genome sequence, 16S sequence, Bacteria
description: Mycoplasmoides fastidiosum 4822 is a bacterium of the family Mycoplasmoidaceae.
NCBI tax id
- NCBI tax id: 92758
- Matching level: species
strain history
- @ref: 15479
- history: <- J. K. Davis {2007} <- J. G. Tully <- NCTC; NCTC 10180 <- MRLN <- R. M. Lemcke and J. Poland
doi: 10.13145/bacdive8601.20240916.9.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/mycoplasmatota
- domain: Bacteria
- phylum: Mycoplasmatota
- class: Mollicutes
- order: Mycoplasmoidales
- family: Mycoplasmoidaceae
- genus: Mycoplasmoides
- species: Mycoplasmoides fastidiosum
- full scientific name: Mycoplasmoides fastidiosum (Lemcke and Poland 1980) Gupta et al. 2018
synonyms
- @ref: 20215
- synonym: Mycoplasma fastidiosum
@ref: 15479
domain: Bacteria
phylum: Tenericutes
class: Mollicutes
order: Mycoplasmatales
family: Mycoplasmoidaceae
genus: Mycoplasmoides
species: Mycoplasmoides fastidiosum
full scientific name: Mycoplasmoides fastidiosum (Lemcke and Poland 1980) Gupta et al. 2018
strain designation: 4822
type strain: yes
Morphology
cell morphology
- @ref: 69480
- motility: no
- confidence: 94.33
Culture and growth conditions
culture medium
- @ref: 15479
- name: SP4-Z MEDIUM (DSMZ Medium 1076b)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1076b
- composition: Name: SP4-Z MEDIUM (DSMZ Medium 1076b) Composition: Agar 10.0 g/l Tryptone 10.0 g/l Bacto peptone 5.0 g/l PPLO broth 3.5 g/l Urea 2.0 g/l Glucose 1.0 g/l None 1.0 g/l Yeast extract 0.4 g/l DNA 0.2 g/l CMRL 1066 Fetal bovine serum Swine serum Distilled water
culture temp
- @ref: 15479
- growth: positive
- type: growth
- temperature: 37
Physiology and metabolism
spore formation
- @ref: 69480
- spore formation: no
- confidence: 93.845
Safety information
risk assessment
- @ref: 15479
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Mycoplasma fastidiosum 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | AY781782 | 986 | nuccore | 92758 |
| 15479 | Mycoplasma fastidiosum 16S ribosomal RNA, partial sequence | AF125878 | 1455 | nuccore | 92758 |
Genome sequences
- @ref: 66792
- description: Mycoplasmoides fastidiosum 4822
- accession: GCA_024498275
- assembly level: complete
- database: ncbi
- NCBI tax ID: 92758
Genome-based predictions
predictions
| @ref | trait | model | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | yes | 59.977 | no |
| 69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 82.284 | no |
| 69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 88.648 | no |
| 69480 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 93.845 | no |
| 69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | no | 96.593 | yes |
| 69480 | flagellated | motile2+ | Ability to perform flagellated movement | no | 94.33 | no |
External links
@ref: 15479
culture collection no.: DSM 21204, ATCC 33229, NCTC 10180
straininfo link
- @ref: 77984
- straininfo: 40403
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 15479 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 21204) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-21204 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
| 77984 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID40403.1 | StrainInfo: A central database for resolving microbial strain identifiers |