Strain identifier

BacDive ID: 8507

Type strain: Yes

Species: Mycobacterium montefiorense

Strain history: CIP <- 2005, DSMZ <- M. H. Levi

NCBI tax ID(s): 154654 (species)

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General

@ref: 11917

BacDive-ID: 8507

DSM-Number: 44602

keywords: genome sequence, 16S sequence, Bacteria, mesophilic, Gram-positive, rod-shaped, animal pathogen

description: Mycobacterium montefiorense DSM 44602 is a mesophilic, Gram-positive, rod-shaped animal pathogen that was isolated from granulomatous skin lesions of moray eels.

NCBI tax id

  • NCBI tax id: 154654
  • Matching level: species

strain history

@refhistory
11917<- M. H. Levi
121130CIP <- 2005, DSMZ <- M. H. Levi

doi: 10.13145/bacdive8507.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Mycobacteriaceae
  • genus: Mycobacterium
  • species: Mycobacterium montefiorense
  • full scientific name: Mycobacterium montefiorense Levi et al. 2003

@ref: 11917

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Mycobacteriaceae

genus: Mycobacterium

species: Mycobacterium montefiorense

full scientific name: Mycobacterium montefiorense Levi et al. 2003

type strain: yes

Morphology

cell morphology

  • @ref: 121130
  • gram stain: positive
  • cell shape: rod-shaped
  • motility: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
11917MIDDLEBROOK MEDIUM (DSMZ Medium 645)yeshttps://mediadive.dsmz.de/medium/645Name: MIDDLEBROOK MEDIUM (DSMZ Medium 645) Composition: Bacto Middlebrook 7H10 agar 20.9945 g/l Glycerol Distilled water
121130CIP Medium 93yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=93
121130CIP Medium 96yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=96

culture temp

  • @ref: 11917
  • growth: positive
  • type: growth
  • temperature: 25
  • range: mesophilic

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
11917granulomatous skin lesions of moray eelsBronx, New YorkUSAUSANorth America
121130Granulomatous skin lesions of moray eelsUnited States of AmericaUSANorth America

isolation source categories

Cat1Cat2Cat3
#Host#Fishes
#Host Body-Site#Other#Wound
#Host Body-Site#Organ#Skin, Nail, Hair

Safety information

risk assessment

@refpathogenicity animalbiosafety levelbiosafety level comment
11917yes1Risk group (German classification)
1211301Risk group (French classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Mycobacterium montefiorense strain DSM 44602 16S ribosomal RNA gene, partial sequenceAY943214509ena154654
20218Mycobacterium montefiorense strain ATCC BAA-256 16S-23S ribosomal RNA intergenic spacer, partial sequenceHM754632283ena154654
11917Mycobacterium montefiorense small subunit ribosomal RNA gene, and internal transcribed spacer 1, partial sequenceAF3300381731ena154654

Genome sequences

  • @ref: 66792
  • description: Mycobacterium montefiorense DSM 44602
  • accession: GCA_025823255
  • assembly level: scaffold
  • database: ncbi
  • NCBI tax ID: 154654

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
motileno93.973no
flagellatedno98.73no
gram-positiveyes88.817no
anaerobicno99.247no
aerobicyes91.891no
halophileno95.053no
spore-formingno87.532no
glucose-fermentno91.932no
thermophileno97.898no
glucose-utilyes73.024no

External links

@ref: 11917

culture collection no.: DSM 44602, ATCC BAA 256, CIP 108974, CCUG 51898

straininfo link

  • @ref: 77898
  • straininfo: 113683

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
11917Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 44602)https://www.dsmz.de/collection/catalogue/details/culture/DSM-44602
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg10.1093/nar/gkaa1025BRENDA, the ELIXIR core data resource in 2021: new developments and updatesNucleic Acids Res. 49: D498-D508 202033211880
77898Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID113683.1StrainInfo: A central database for resolving microbial strain identifiers
121130Curators of the CIPCollection of Institut Pasteur (CIP 108974)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20108974