Strain identifier

BacDive ID: 8490

Type strain: Yes

Species: Mycobacterium heckeshornense

Strain Designation: S369

Strain history: CIP 107347 <-- DSM 44428 <-- A. Roth S369.

NCBI tax ID(s): 110505 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 11548

BacDive-ID: 8490

DSM-Number: 44428

keywords: microaerophile, Bacteria, 16S sequence, genome sequence, mesophilic

description: Mycobacterium heckeshornense S369 is a microaerophile, mesophilic bacterium that was isolated from respiratory tract women .

NCBI tax id

  • NCBI tax id: 110505
  • Matching level: species

strain history

doi: 10.13145/bacdive8490.20220920.7

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Mycobacteriaceae
  • genus: Mycobacterium
  • species: Mycobacterium heckeshornense
  • full scientific name: Mycobacterium heckeshornense Roth et al. 2001

@ref: 11548

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Mycobacteriaceae

genus: Mycobacterium

species: Mycobacterium heckeshornense

full scientific name: Mycobacterium heckeshornense Roth et al. 2001

strain designation: S369

type strain: yes

Morphology

multimedia

  • @ref: 11548
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_44428.jpg
  • caption: Medium 645 37°C
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
11548MIDDLEBROOK MEDIUM (DSMZ Medium 645)yeshttps://bacmedia.dsmz.de/medium/645Name: MIDDLEBROOK MEDIUM (DSMZ Medium 645) Composition: Bacto Middlebrook 7H10 agar 20.9945 g/l Glycerol Distilled water
36334MEDIUM 93 - for Mycobacterium avium subsp. sylvaticumyesDistilled water make up to (900.000 ml);Glycerol (4.500 ml);Middlebrook7H10 agar (17.000 g);Middelbrook OADC enrichment (100.000 ml)

culture temp

@refgrowthtypetemperaturerange
11548positivegrowth37mesophilic
36334positivegrowth37mesophilic
59358positivegrowth37mesophilic
67770positivegrowth37mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 59358
  • oxygen tolerance: microaerophile

observation

  • @ref: 67770
  • observation: quinones: MK-9(H2)

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
11548respiratory tract women (immunocompetent)BerlinGermanyDEUEurope
59358Human respiratory tract,woman,immunocompetentGermanyDEUEurope
67770Respiratory tract of an immunocompetent womenBerlinGermanyDEUEurope

isolation source categories

Cat1Cat2Cat3
#Host#Human#Female
#Host Body-Site#Oral cavity and airways#Airways

Safety information

risk assessment

  • @ref: 11548
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Mycobacterium heckeshornense strain DSM 44428 16S ribosomal RNA gene, partial sequenceAF547934560ena110505
11548Mycobacterium heckeshornense 16S ribosomal RNA gene, partial sequenceAF1742901527ena110505

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Mycobacterium heckeshornense JCM 15655GCA_016592155completencbi110505
66792Mycobacterium heckeshornense strain JCM 15655110505.9completepatric110505

External links

@ref: 11548

culture collection no.: DSM 44428, CCUG 51897, JCM 15655, CIP 107347

straininfo link

  • @ref: 20218
  • passport: http://www.straininfo.net/strains/169639

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny11060075Mycobacterium heckeshornense sp. nov., A new pathogenic slowly growing Mycobacterium sp. Causing cavitary lung disease in an immunocompetent patient.Roth A, Reischl U, Schonfeld N, Naumann L, Emler S, Fischer M, Mauch H, Loddenkemper R, Kroppenstedt RMJ Clin Microbiol10.1128/JCM.38.11.4102-4107.20002000Adult, Base Sequence, DNA, Bacterial/analysis/genetics, DNA, Ribosomal/analysis/genetics, Female, Humans, Immunocompetence, Molecular Sequence Data, Mycobacterium Infections, Nontuberculous/*microbiology, Nontuberculous Mycobacteria/chemistry/*classification/genetics/*isolation & purification/pathogenicity, Phylogeny, RNA, Ribosomal, 16S/genetics, Tuberculosis, Pulmonary/*microbiology, VirulencePathogenicity
Genetics33707319Complete Genome Sequence of Mycobacterium heckeshornense JCM 15655(T), Closely Related to a Pathogenic Nontuberculous Mycobacterial Species, Mycobacterium xenopi.Yoshida M, Fukano H, Asakura T, Suzuki M, Hoshino YMicrobiol Resour Announc10.1128/MRA.00020-212021

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
11548Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 44428)https://www.dsmz.de/collection/catalogue/details/culture/DSM-44428
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
36334Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/4773
59358Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 51897)https://www.ccug.se/strain?id=51897
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/