Strain identifier
BacDive ID: 8462
Type strain: 
Species: Mycobacterium conspicuum
Strain history: <- M. Fischer, University Hospital Magdeburg, Dept. Dermatology, T-849
NCBI tax ID(s): 44010 (species)
General
@ref: 11523
BacDive-ID: 8462
DSM-Number: 44146
keywords: 16S sequence, Bacteria, mesophilic
description: Mycobacterium conspicuum DSM 44146 is a mesophilic bacterium that was isolated from swab from wound, cellular primary immunodeficiency.
NCBI tax id
- NCBI tax id: 44010
- Matching level: species
strain history
- @ref: 11523
- history: <- M. Fischer, University Hospital Magdeburg, Dept. Dermatology, T-849
doi: 10.13145/bacdive8462.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Mycobacteriales
- family: Mycobacteriaceae
- genus: Mycobacterium
- species: Mycobacterium conspicuum
- full scientific name: Mycobacterium conspicuum Springer et al. 1996
@ref: 11523
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Mycobacteriaceae
genus: Mycobacterium
species: Mycobacterium conspicuum
full scientific name: Mycobacterium conspicuum Springer et al. 1996 emend. Nouioui et al. 2018
type strain: no
Culture and growth conditions
culture medium
- @ref: 11523
- name: LÖWENSTEIN-JENSEN MEDIUM (DSMZ Medium 354)
- growth: yes
- link: https://mediadive.dsmz.de/medium/354
- composition: Name: LÖWENSTEIN-JENSEN MEDIUM (DSMZ Medium 354) Composition: Potato flour 18.6104 g/l L-Asparagin 2.23325 g/l KH2PO4 1.55087 g/l Mg-citrate 0.372208 g/l Malachite green 0.248139 g/l MgSO4 0.148883 g/l Glycerol Fresh egg mixture Distilled water
culture temp
- @ref: 11523
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 11523
- sample type: swab from wound, cellular primary immunodeficiency
- geographic location: Magdeburg
- country: Germany
- origin.country: DEU
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Infection | #Patient | #Swab |
| #Host Body-Site | #Other | #Wound |
Safety information
risk assessment
- @ref: 11523
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | M.conspicuum DNA for 16S ribosomal RNA | X88563 | 461 | ena | 44010 |
| 20218 | M.conspicuum complete internal transcribed spacer between 16S rRNA and 23S rRNA | X92668 | 282 | ena | 44010 |
External links
@ref: 11523
culture collection no.: DSM 44146
straininfo link
- @ref: 77857
- straininfo: 50508
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 11523 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 44146) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-44146 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | 10.1093/nar/gkaa1025 | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 | |
| 77857 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID50508.1 | StrainInfo: A central database for resolving microbial strain identifiers |