Strain identifier
BacDive ID: 8374
Type strain: 
Species: Mycolicibacterium vinylchloridicum
Strain Designation: L1
Strain history: <- S. Hartmans; L1 <- A.M.A. van der Linden
NCBI tax ID(s): 1791 (species)
version 8.1 (current version)
General
@ref: 2772
BacDive-ID: 8374
DSM-Number: 6695
keywords: 16S sequence, Bacteria, mesophilic
description: Mycolicibacterium vinylchloridicum L1 is a mesophilic bacterium that was isolated from contaminated soil.
NCBI tax id
- NCBI tax id: 1791
- Matching level: species
strain history
- @ref: 2772
- history: <- S. Hartmans; L1 <- A.M.A. van der Linden
doi: 10.13145/bacdive8374.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Mycobacteriales
- family: Mycobacteriaceae
- genus: Mycolicibacterium
- species: Mycolicibacterium vinylchloridicum
- full scientific name: Mycolicibacterium vinylchloridicum Cortés-Albayay et al. 2023
@ref: 2772
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Mycobacteriaceae
genus: Mycobacterium
species: Mycobacterium aurum
full scientific name: Mycobacterium aurum Tsukamura 1966 emend. Nouioui et al. 2018
strain designation: L1
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 2772 | MIDDLEBROOK MEDIUM (DSMZ Medium 645) | yes | https://mediadive.dsmz.de/medium/645 | Name: MIDDLEBROOK MEDIUM (DSMZ Medium 645) Composition: Bacto Middlebrook 7H10 agar 20.9945 g/l Glycerol Distilled water |
| 2772 | LÖWENSTEIN-JENSEN MEDIUM (DSMZ Medium 354) | yes | https://mediadive.dsmz.de/medium/354 | Name: LÖWENSTEIN-JENSEN MEDIUM (DSMZ Medium 354) Composition: Potato flour 18.6104 g/l L-Asparagin 2.23325 g/l KH2PO4 1.55087 g/l Mg-citrate 0.372208 g/l Malachite green 0.248139 g/l MgSO4 0.148883 g/l Glycerol Fresh egg mixture Distilled water |
culture temp
- @ref: 2772
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 2772
- sample type: contaminated soil
- geographic location: Arnhem
- country: Netherlands
- origin.country: NLD
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Contamination | |
| #Environmental | #Terrestrial | #Soil |
Safety information
risk assessment
- @ref: 2772
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 20218
- description: Mycobacterium aurum strain DSM 6695 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence
- accession: DQ834675
- length: 579
- database: ena
- NCBI tax ID: 1791
External links
@ref: 2772
culture collection no.: DSM 6695
straininfo link
- @ref: 77773
- straininfo: 48270
literature
- topic: Phylogeny
- Pubmed-ID: 35003006
- title: Comparative Genomic Study of Vinyl Chloride Cluster and Description of Novel Species, Mycolicibacterium vinylchloridicum sp. nov.
- authors: Cortes-Albayay C, Sangal V, Klenk HP, Nouioui I
- journal: Front Microbiol
- DOI: 10.3389/fmicb.2021.767895
- year: 2021
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 2772 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 6695) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-6695 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 77773 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID48270.1 | StrainInfo: A central database for resolving microbial strain identifiers |