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Strain identifier

BacDive ID: 825

Type strain: No

Species: Bacillus sp.

Strain Designation: YT-P

Strain history: <- W. Heinen, YP-T (Bacillus caldolyticus)

NCBI tax ID(s): 427332 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 183

BacDive-ID: 825

DSM-Number: 405

keywords: 16S sequence, Bacteria, thermophilic

description: Bacillus sp. YT-P is a thermophilic bacterium that was isolated from hot natural pool.

NCBI tax id

  • NCBI tax id: 427332
  • Matching level: species

strain history: <- W. Heinen, YP-T (Bacillus caldolyticus)

doi: 10.13145/bacdive825.20221219.7.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Bacillaceae
  • genus: Bacillus
  • species: Bacillus sp.
  • full scientific name: Bacillus Cohn 1872 (Approved Lists 1980)
  • synonyms

    @refsynonym
    20215Quasibacillus
    20215Pseudobacillus
    20215Maribacillus

@ref: 183

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Bacillaceae

genus: Bacillus

species: Bacillus sp.

full scientific name: Bacillus sp.

strain designation: YT-P

type strain: no

Morphology

cell morphology

  • @ref: 69480
  • gram stain: positive
  • confidence: 95.681

Culture and growth conditions

culture medium

  • @ref: 183
  • name: NUTRIENT AGAR (DSMZ Medium 1)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/1
  • composition: Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

culture temp

@refgrowthtypetemperaturerangeconfidence
183positivegrowth70thermophilic
69480thermophilic100

Physiology and metabolism

spore formation

  • @ref: 69480
  • spore formation: yes
  • confidence: 95.709

compound production

@refcompound
183amylase, thermostable
183protease
183restriction endonuclease BclI
183L leucine dehydrogenase

halophily

  • @ref: 69480
  • halophily level: non-halophilic
  • confidence: 93.851

Isolation, sampling and environmental information

isolation

  • @ref: 183
  • sample type: hot natural pool
  • country: USA
  • origin.country: USA
  • continent: North America

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Pond (small)
#Condition#Thermophilic (>45°C)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Geobacillus sp. NBRC 15313 gene for 16S rRNA, partial sequenceAB6808321483ena1113646
20218Bacillus caldolyticus (DSM 405) ribosomal RNA small subunitM774841432ena1394
20218B.caldolyticus gene for 16S ribosomal RNAZ269241516ena1394

External links

@ref: 183

culture collection no.: DSM 405, IFO 15313, NBRC 15313

straininfo link

@refpassport
20218http://www.straininfo.net/strains/46745
20218http://www.straininfo.net/strains/46747
20218http://www.straininfo.net/strains/487948

literature

  • topic: Enzymology
  • Pubmed-ID: 10091322
  • title: The amylopullulanase of Bacillus sp. DSM 405.
  • authors: Brunswick JM, Kelly CT, Fogarty WM
  • journal: Appl Microbiol Biotechnol
  • DOI: 10.1007/s002530051378
  • year: 1999
  • mesh: Bacillus/*enzymology/growth & development, *Bacterial Proteins/chemistry/isolation & purification/metabolism, Binding Sites, Carbodiimides/pharmacology, Enzyme Activation, Glucans/metabolism, *Glycoside Hydrolases/chemistry/isolation & purification/metabolism/pharmacology, Kinetics, Starch/metabolism, alpha-Amylases/metabolism
  • topic2: Metabolism

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
183Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 405)https://www.dsmz.de/collection/catalogue/details/culture/DSM-405
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)