Strain identifier
BacDive ID: 825
Type strain: 
Species: Bacillus sp.
Strain Designation: YT-P
Strain history: <- W. Heinen, YP-T (Bacillus caldolyticus)
NCBI tax ID(s): 427332 (species)
version 7.1 (current version)
General
@ref: 183
BacDive-ID: 825
DSM-Number: 405
keywords: 16S sequence, Bacteria, thermophilic
description: Bacillus sp. YT-P is a thermophilic bacterium that was isolated from hot natural pool.
NCBI tax id
- NCBI tax id: 427332
- Matching level: species
strain history: <- W. Heinen, YP-T (Bacillus caldolyticus)
doi: 10.13145/bacdive825.20221219.7.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Bacillaceae
- genus: Bacillus
- species: Bacillus sp.
- full scientific name: Bacillus Cohn 1872 (Approved Lists 1980)
synonyms
@ref synonym 20215 Quasibacillus 20215 Pseudobacillus 20215 Maribacillus
@ref: 183
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Bacillaceae
genus: Bacillus
species: Bacillus sp.
full scientific name: Bacillus sp.
strain designation: YT-P
type strain: no
Morphology
cell morphology
- @ref: 69480
- gram stain: positive
- confidence: 95.681
Culture and growth conditions
culture medium
- @ref: 183
- name: NUTRIENT AGAR (DSMZ Medium 1)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1
- composition: Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
culture temp
| @ref | growth | type | temperature | range | confidence |
|---|---|---|---|---|---|
| 183 | positive | growth | 70 | thermophilic | |
| 69480 | thermophilic | 100 |
Physiology and metabolism
spore formation
- @ref: 69480
- spore formation: yes
- confidence: 95.709
compound production
| @ref | compound |
|---|---|
| 183 | amylase, thermostable |
| 183 | protease |
| 183 | restriction endonuclease BclI |
| 183 | L leucine dehydrogenase |
halophily
- @ref: 69480
- halophily level: non-halophilic
- confidence: 93.851
Isolation, sampling and environmental information
isolation
- @ref: 183
- sample type: hot natural pool
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Aquatic | #Pond (small) |
| #Condition | #Thermophilic (>45°C) |
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Geobacillus sp. NBRC 15313 gene for 16S rRNA, partial sequence | AB680832 | 1483 | ena | 1113646 |
| 20218 | Bacillus caldolyticus (DSM 405) ribosomal RNA small subunit | M77484 | 1432 | ena | 1394 |
| 20218 | B.caldolyticus gene for 16S ribosomal RNA | Z26924 | 1516 | ena | 1394 |
External links
@ref: 183
culture collection no.: DSM 405, IFO 15313, NBRC 15313
straininfo link
| @ref | passport |
|---|---|
| 20218 | http://www.straininfo.net/strains/46745 |
| 20218 | http://www.straininfo.net/strains/46747 |
| 20218 | http://www.straininfo.net/strains/487948 |
literature
- topic: Enzymology
- Pubmed-ID: 10091322
- title: The amylopullulanase of Bacillus sp. DSM 405.
- authors: Brunswick JM, Kelly CT, Fogarty WM
- journal: Appl Microbiol Biotechnol
- DOI: 10.1007/s002530051378
- year: 1999
- mesh: Bacillus/*enzymology/growth & development, *Bacterial Proteins/chemistry/isolation & purification/metabolism, Binding Sites, Carbodiimides/pharmacology, Enzyme Activation, Glucans/metabolism, *Glycoside Hydrolases/chemistry/isolation & purification/metabolism/pharmacology, Kinetics, Starch/metabolism, alpha-Amylases/metabolism
- topic2: Metabolism
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 183 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 405) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-405 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) |