Strain identifier
BacDive ID: 8166
Type strain:
Species: Moraxella ovis
Strain Designation: 199/55, LNP 427
Strain history: CIP <- 1981, J.Y. Riou, Inst. Pasteur, Paris, France: strain LNP 427 <- Holten, Rikshosp., Oslo, Norway: strain 199/55, Neisseria ovis
NCBI tax ID(s): 29433 (species)
General
@ref: 7376
BacDive-ID: 8166
DSM-Number: 18075
keywords: genome sequence, 16S sequence, Bacteria, mesophilic, animal pathogen
description: Moraxella ovis 199/55 is a mesophilic animal pathogen that was isolated from conjunctivitis, sheep.
NCBI tax id
- NCBI tax id: 29433
- Matching level: species
strain history
@ref | history |
---|---|
7376 | <- CIP <- J.-Y. Riou, Inst. Pasteur Paris; LNP 427 <- E. Holten, Rites hospital, Oslo; 199/55 |
121475 | CIP <- 1981, J.Y. Riou, Inst. Pasteur, Paris, France: strain LNP 427 <- Holten, Rikshosp., Oslo, Norway: strain 199/55, Neisseria ovis |
doi: 10.13145/bacdive8166.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pseudomonadales
- family: Moraxellaceae
- genus: Moraxella
- species: Moraxella ovis
- full scientific name: Moraxella ovis (Lindqvist 1960) Henriksen and Bøvre 1968 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Neisseria ovis
@ref: 7376
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pseudomonadales
family: Moraxellaceae
genus: Moraxella
species: Moraxella ovis
full scientific name: Moraxella ovis (Lindqvist 1960) Henriksen and Bøvre 1968
strain designation: 199/55, LNP 427
type strain: yes
Morphology
cell morphology
@ref | motility | confidence | gram stain |
---|---|---|---|
69480 | no | 95.775 | |
69480 | 99.964 | negative |
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
7376 | COLUMBIA BLOOD AGAR (DSMZ Medium 429) | yes | https://mediadive.dsmz.de/medium/429 | Name: COLUMBIA BLOOD AGAR (DSMZ Medium 429) Composition: Horse blood 40.0 g/l Columbia agar base |
40063 | MEDIUM 4 - Columbia agar with 20 % sterile defibrinated horse serum | yes | Horse serum (200.000 ml);Columbia agar (39.000 g);Distilled water make up to (1000.000 ml) | |
121475 | CIP Medium 4 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=4 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
7376 | positive | growth | 30 | mesophilic |
40063 | positive | growth | 30 | mesophilic |
Physiology and metabolism
spore formation
@ref | spore formation | confidence |
---|---|---|
69481 | no | 100 |
69480 | no | 99.999 |
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68377 | 17634 | D-glucose | - | builds acid from |
68377 | 15824 | D-fructose | - | builds acid from |
68377 | 17306 | maltose | - | builds acid from |
68377 | 17992 | sucrose | - | builds acid from |
68377 | 18257 | ornithine | - | degradation |
68377 | 27897 | tryptophan | - | energy source |
metabolite production
- @ref: 68377
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 68377
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
@ref | value | activity | ec |
---|---|---|---|
68377 | tryptophan deaminase | - | 4.1.99.1 |
68377 | gamma-glutamyltransferase | - | 2.3.2.2 |
68377 | proline-arylamidase | - | 3.4.11.5 |
68377 | beta-galactosidase | - | 3.2.1.23 |
68377 | alkaline phosphatase | - | 3.1.3.1 |
68377 | ornithine decarboxylase | - | 4.1.1.17 |
68377 | beta-lactamase | - | 3.5.2.6 |
API NH
@ref | PEN | GLU | FRU | MAL | SAC | ODC | URE | LIP | PAL | beta GAL | ProA | GGT | IND |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
7376 | - | - | - | - | - | - | + | - | - | - | - | - | - |
7376 | - | - | - | - | - | - | - | + | - | - | - | - | - |
Isolation, sampling and environmental information
isolation
@ref | sample type | geographic location | country | origin.country | continent | sampling date | isolation date |
---|---|---|---|---|---|---|---|
7376 | conjunctivitis, sheep | Oslo | Norway | NOR | Europe | ||
44173 | Ovine eye,conjunctivitis | 1955 | |||||
121475 | Animal, Sheep, conjunctivitis | Oslo | Norway | NOR | Europe | 1955 |
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Infection | #Inflammation | |
#Host | #Mammals | #Caprinae (Sheep/Goat) |
#Host Body-Site | #Organ | #Eye |
Safety information
risk assessment
@ref | pathogenicity animal | biosafety level | biosafety level comment |
---|---|---|---|
7376 | yes | 2 | Risk group (German classification) |
121475 | 1 | Risk group (French classification) |
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20218 | Moraxella ovis 16S rRNA gene, partial | AJ247222 | 447 | ena | 29433 |
20218 | Moraxella ovis 16S ribosomal RNA gene, partial sequence; 16S-23S intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | DQ647928 | 3430 | ena | 29433 |
20218 | N.ovis gene for 16S rRNA | X74896 | 721 | ena | 29433 |
7376 | Moraxella ovis 16S ribosomal RNA gene, partial sequence | AF005186 | 1446 | ena | 29433 |
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Moraxella ovis 199/55 | GCA_001636015 | complete | ncbi | 29433 |
66792 | Moraxella ovis NCTC11227 | GCA_900453105 | contig | ncbi | 29433 |
66792 | Moraxella ovis strain 199/55 | 29433.5 | plasmid | patric | 29433 |
66792 | Moraxella ovis strain 199/55 | 29433.3 | complete | patric | 29433 |
66792 | Moraxella ovis strain NCTC11227 | 29433.7 | wgs | patric | 29433 |
66792 | Moraxella ovis 199/55 | 2687453149 | complete | img | 29433 |
66792 | Moraxella ovis NCTC 11227 | 2873788312 | draft | img | 29433 |
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
spore-forming | no | 100 | no |
flagellated | no | 94.913 | no |
gram-positive | no | 97.28 | no |
anaerobic | no | 98.755 | no |
aerobic | no | 59.518 | no |
halophile | no | 73.381 | no |
spore-forming | no | 96.859 | no |
glucose-util | no | 82.432 | no |
motile | no | 93.188 | no |
thermophile | no | 99.235 | yes |
glucose-ferment | no | 93.205 | no |
External links
@ref: 7376
culture collection no.: DSM 18075, ATCC 33078, CCUG 354, CIP 81.9, LMG 8381, NCTC 11227, CIP 81.09, ITG 2253
straininfo link
- @ref: 77570
- straininfo: 13724
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
7376 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 18075) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-18075 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
40063 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/11166 | ||||
44173 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 354) | https://www.ccug.se/strain?id=354 | |||
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
68377 | Automatically annotated from API NH | |||||
69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | 10.21203/rs.3.rs-2527258/v1 | Predictions based on the model GenomeNet Sporulation v. 1 | |||
77570 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID13724.1 | StrainInfo: A central database for resolving microbial strain identifiers | |||
121475 | Curators of the CIP | Collection of Institut Pasteur (CIP 81.9) | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2081.9 |