Strain identifier

BacDive ID: 8164

Type strain: Yes

Species: Moraxella oblonga

Strain history: IAM 14971 <-- ATCC 29468 <-- M. P. Starr ICPB 3652 (Alysiella sp.).

NCBI tax ID(s): 1349775 (strain), 200413 (species)

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General

@ref: 6845

BacDive-ID: 8164

DSM-Number: 17235

keywords: genome sequence, 16S sequence, Bacteria, aerobe, mesophilic, Gram-negative

description: Moraxella oblonga DSM 17235 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from oral cavity of sheep.

NCBI tax id

NCBI tax idMatching level
1349775strain
200413species

strain history

@refhistory
6845<- IAM <- ?
67770IAM 14971 <-- ATCC 29468 <-- M. P. Starr ICPB 3652 (Alysiella sp.).

doi: 10.13145/bacdive8164.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Moraxellaceae
  • genus: Moraxella
  • species: Moraxella oblonga
  • full scientific name: Moraxella oblonga Xie and Yokota 2005

@ref: 6845

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Moraxellaceae

genus: Moraxella

species: Moraxella oblonga

full scientific name: Moraxella oblonga Xie and Yokota 2005

type strain: yes

Morphology

cell morphology

  • @ref: 69480
  • gram stain: negative
  • confidence: 99.99

colony morphology

  • @ref: 6845
  • incubation period: 1-2 days

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
6845COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yeshttps://mediadive.dsmz.de/medium/693Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
6845COLUMBIA BLOOD AGAR (DSMZ Medium 429)yeshttps://mediadive.dsmz.de/medium/429Name: COLUMBIA BLOOD AGAR (DSMZ Medium 429) Composition: Horse blood 40.0 g/l Columbia agar base

culture temp

@refgrowthtypetemperaturerange
6845positivegrowth37mesophilic
60399positivegrowth37mesophilic
67770positivegrowth37mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 60399
  • oxygen tolerance: aerobe

spore formation

@refspore formationconfidence
69481no100
69480no99.999

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate-assimilation
6836927689decanoate-assimilation
6836924265gluconate-assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose-assimilation
683695291gelatin+hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate-reduction
6837717634D-glucose+builds acid from
6837717306maltose-builds acid from
6837717992sucrose-builds acid from
6837718257ornithine-degradation
6837716199urea-hydrolysis
6837727897tryptophan-energy source

metabolite production

@refChebi-IDmetaboliteproduction
6837735581indoleno
6836935581indoleno

metabolite tests

@refChebi-IDmetaboliteindole test
6837735581indole-
6836935581indole-

enzymes

@refvalueactivityec
68377tryptophan deaminase-4.1.99.1
68377gamma-glutamyltransferase-2.3.2.2
68377proline-arylamidase-3.4.11.5
68377beta-galactosidase-3.2.1.23
68377alkaline phosphatase-3.1.3.1
68377lipase-
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17
68369cytochrome oxidase+1.9.3.1
68369gelatinase+
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
6845------+----------+--+

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
6845++-----------
6845-++----------

Isolation, sampling and environmental information

isolation

@refsample type
6845oral cavity of sheep
60399Oral cavity of sheep
67770Sheep

isolation source categories

Cat1Cat2Cat3
#Host#Mammals#Caprinae (Sheep/Goat)
#Host Body-Site#Oral cavity and airways

Safety information

risk assessment

  • @ref: 6845
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
6845Moraxella oblonga gene for 16S rRNA, strain: IAM 14971AB0872601268ena200413
67770Moraxella oblonga gene for 16S rRNA, partial sequence, strain: NBRC 102422AB6817781454ena200413

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Moraxella oblonga NBRC 1024221349775.3wgspatric1349775
66792Moraxella oblonga NBRC 1024222731957694draftimg1349775
67770Moraxella oblonga NBRC 102422GCA_001598275contigncbi1349775

GC content

  • @ref: 6845
  • GC-content: 40.5

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno100no
motileno89.058no
gram-positiveno98.092no
anaerobicno97.094yes
halophileno81.979no
spore-formingno95.454no
glucose-utilno86.756yes
flagellatedno89.858no
thermophileno99.463yes
aerobicno87.68no
glucose-fermentno92.685yes

External links

@ref: 6845

culture collection no.: DSM 17235, ATCC 29468, IAM 14971, ICPB 3652, CCUG 54938, JCM 21442, KCTC 32987, NBRC 102422

straininfo link

  • @ref: 77568
  • straininfo: 46325

literature

  • topic: Phylogeny
  • Pubmed-ID: 15653896
  • title: Transfer of the misnamed [Alysiella] sp. IAM 14971 (=ATCC 29468) to the genus Moraxella as Moraxella oblonga sp. nov.
  • authors: Xie CH, Yokota A
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.63250-0
  • year: 2005
  • mesh: Animals, DNA, Bacterial/analysis, DNA, Ribosomal/analysis, Fatty Acids/analysis, Genes, rRNA, Humans, Molecular Sequence Data, Moraxella/chemistry/*classification/genetics/metabolism, Neisseriaceae/*classification, Phenotype, Phylogeny, Quinones/analysis, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA
  • topic2: Pathogenicity

Reference

@idauthorscataloguedoi/urltitle
6845Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 17235)https://www.dsmz.de/collection/catalogue/details/culture/DSM-17235
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
60399Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 54938)https://www.ccug.se/strain?id=54938
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68369Automatically annotated from API 20NE
68377Automatically annotated from API NH
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch10.21203/rs.3.rs-2527258/v1Predictions based on the model GenomeNet Sporulation v. 1
77568Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID46325.1StrainInfo: A central database for resolving microbial strain identifiers