Strain identifier
BacDive ID: 8146
Type strain:
Species: Acinetobacter pittii
Strain history: CIP <- 1970, M. Piéchaud, Inst. Pasteur, Paris, France, Moraxella glucidolytica var. nonliquefaciens <- 1969, ATCC <- A.L. Courtieu: strain 57.071.228, Herellea vaginicola
NCBI tax ID(s): 1311774 (strain), 48296 (species)
General
@ref: 18064
BacDive-ID: 8146
DSM-Number: 25618
keywords: genome sequence, 16S sequence, Bacteria, aerobe, mesophilic, Gram-negative, rod-shaped
description: Acinetobacter pittii CCUG 61664 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from human cerobrospinal fluid.
NCBI tax id
NCBI tax id | Matching level |
---|---|
1311774 | strain |
48296 | species |
strain history
@ref | history |
---|---|
18064 | <- CIP <- M. Piéchaud <- ATCC <- A. Courtieu |
121846 | CIP <- 1970, M. Piéchaud, Inst. Pasteur, Paris, France, Moraxella glucidolytica var. nonliquefaciens <- 1969, ATCC <- A.L. Courtieu: strain 57.071.228, Herellea vaginicola |
doi: 10.13145/bacdive8146.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pseudomonadales
- family: Moraxellaceae
- genus: Acinetobacter
- species: Acinetobacter pittii
- full scientific name: Acinetobacter pittii Nemec et al. 2011
@ref: 18064
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pseudomonadales
family: Moraxellaceae
genus: Acinetobacter
species: Acinetobacter pittii
full scientific name: Acinetobacter pittii Nemec et al. 2011
type strain: yes
Morphology
cell morphology
- @ref: 121846
- gram stain: negative
- cell shape: rod-shaped
- motility: no
colony morphology
@ref | incubation period | hemolysis ability |
---|---|---|
18064 | 1-2 days | |
121846 | 1 |
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
18064 | CASO AGAR (MERCK 105458) (DSMZ Medium 220) | yes | https://mediadive.dsmz.de/medium/220 | Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water |
42143 | MEDIUM 72- for trypto casein soja agar | yes | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |
121846 | CIP Medium 72 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72 |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
18064 | positive | growth | 30 | mesophilic |
42143 | positive | growth | 30 | mesophilic |
62684 | positive | growth | 30 | mesophilic |
121846 | positive | growth | 25-41 | |
121846 | no | growth | 10 | psychrophilic |
121846 | no | growth | 45 | thermophilic |
Physiology and metabolism
oxygen tolerance
@ref | oxygen tolerance |
---|---|
62684 | aerobe |
121846 | obligate aerobe |
halophily
@ref | salt | growth | tested relation | concentration |
---|---|---|---|---|
121846 | NaCl | positive | growth | 0-4 % |
121846 | NaCl | no | growth | 6 % |
121846 | NaCl | no | growth | 8 % |
121846 | NaCl | no | growth | 10 % |
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68369 | 25115 | malate | + | assimilation |
68369 | 17128 | adipate | + | assimilation |
68369 | 27689 | decanoate | + | assimilation |
68369 | 24265 | gluconate | - | assimilation |
68369 | 17306 | maltose | - | assimilation |
68369 | 59640 | N-acetylglucosamine | - | assimilation |
68369 | 16899 | D-mannitol | - | assimilation |
68369 | 16024 | D-mannose | - | assimilation |
68369 | 30849 | L-arabinose | + | assimilation |
68369 | 17634 | D-glucose | - | assimilation |
68369 | 5291 | gelatin | - | hydrolysis |
68369 | 16199 | urea | - | hydrolysis |
68369 | 29016 | arginine | - | hydrolysis |
68369 | 27897 | tryptophan | - | energy source |
68369 | 17632 | nitrate | - | reduction |
121846 | 16947 | citrate | + | carbon source |
121846 | 17632 | nitrate | + | reduction |
121846 | 16301 | nitrite | - | reduction |
121846 | 17632 | nitrate | - | respiration |
antibiotic resistance
- @ref: 121846
- metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
- is antibiotic: yes
- is sensitive: no
- is resistant: yes
metabolite production
@ref | Chebi-ID | metabolite | production |
---|---|---|---|
68369 | 35581 | indole | no |
121846 | 35581 | indole | no |
metabolite tests
@ref | Chebi-ID | metabolite | indole test | voges-proskauer-test | methylred-test |
---|---|---|---|---|---|
68369 | 35581 | indole | - | ||
121846 | 15688 | acetoin | - | ||
121846 | 17234 | glucose | - |
enzymes
@ref | value | activity | ec |
---|---|---|---|
18064 | catalase | + | 1.11.1.6 |
18064 | cytochrome-c oxidase | - | 1.9.3.1 |
68369 | cytochrome oxidase | - | 1.9.3.1 |
68369 | gelatinase | - | |
68369 | urease | - | 3.5.1.5 |
68369 | arginine dihydrolase | - | 3.5.3.6 |
121846 | oxidase | - | |
121846 | beta-galactosidase | - | 3.2.1.23 |
121846 | gelatinase | - | |
121846 | catalase | + | 1.11.1.6 |
121846 | gamma-glutamyltransferase | + | 2.3.2.2 |
121846 | urease | + | 3.5.1.5 |
68382 | alkaline phosphatase | + | 3.1.3.1 |
68382 | esterase (C 4) | + | |
68382 | esterase lipase (C 8) | + | |
68382 | leucine arylamidase | + | 3.4.11.1 |
68382 | valine arylamidase | + | |
68382 | trypsin | - | 3.4.21.4 |
68382 | alpha-chymotrypsin | - | 3.4.21.1 |
68382 | acid phosphatase | + | 3.1.3.2 |
68382 | naphthol-AS-BI-phosphohydrolase | + | |
68382 | alpha-galactosidase | - | 3.2.1.22 |
68382 | beta-galactosidase | - | 3.2.1.23 |
68382 | beta-glucuronidase | - | 3.2.1.31 |
68382 | alpha-glucosidase | - | 3.2.1.20 |
68382 | beta-glucosidase | - | 3.2.1.21 |
68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68382 | alpha-mannosidase | - | 3.2.1.24 |
68382 | alpha-fucosidase | - | 3.2.1.51 |
API zym
@ref | Control | Alkaline phosphatase | Esterase | Esterase Lipase | Lipase | Leucine arylamidase | Valine arylamidase | Cystine arylamidase | Trypsin | alpha- Chymotrypsin | Acid phosphatase | Naphthol-AS-BI-phosphohydrolase | alpha- Galactosidase | beta- Galactosidase | beta- Glucuronidase | alpha- Glucosidase | beta- Glucosidase | N-acetyl-beta- glucosaminidase | alpha- Mannosidase | alpha- Fucosidase |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
62684 | - | + | + | + | - | + | + | + | - | - | + | + | - | - | - | - | - | - | - | - |
121846 | - | + | + | + | + | + | + | - | - | - | + | + | - | - | - | - | - | - | - | - |
API 20NE
@ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
18064 | - | - | + | - | - | - | - | - | - | + | - | - | - | - | - | + | + | + | + | + | |
18064 | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | + | + | + | + | + | |
62684 | - | - | + | - | - | - | - | - | - | + | - | - | - | - | - | + | + | + | + | + | - |
18064 | - | - | - | - | - | + | - | - | - | + | - | - | - | - | - | + | + | + | + | + | - |
API biotype100
@ref | GLU | FRU | GAL | TRE | MNE | SBE | MEL | SAC | RAF | MTE | MAL | LAC | LTE | MbGa | MaGa | CEL | GEN | MbGu | ESC | RIB | ARA | XYL | PLE | RHA | FUC | MLZ | DARL | LARL | XLT | DUL | TAG | GLY | INO | MAN | MTL | TUR | SOR | ADO | HBG | LYX | ERY | MDG | 3MDG | SAT | MUC | LTAT | DTAT | MTAT | DMLT | LMLT | CATE | TATE | TTE | CIT | GRT | GAT | 2KG | 5KG | TRY | NAG | GNT | PAC | PAT | pOBE | QAT | GTE | mOBE | BAT | PPAT | CMT | TGE | BET | PCE | ABT | HIN | LAT | CAP | CYT | HIS | SUC | FUM | GRE | GYT | AVT | ETN | TTN | GLN | ITA | 3OBU | APT | GTT | PRO | DALA | LALA | SER | MNT | PROP | TYR | 2KT |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
121846 | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | + | + | + | - | - | + | + | + | + | + | + | - | - | - | - | - | - | - | + | + | + | - | - | - | + | - | - | + | - | + | + | - | + | + | + | - | + | + | + | - | - | - | - | - | - | + | + | + | + | + | + | + | + | + | + | - |
Isolation, sampling and environmental information
isolation
@ref | sample type | sampling date | country | origin.country | continent |
---|---|---|---|---|---|
18064 | human cerobrospinal fluid | ||||
62684 | Human cerebrospinal fluid | 1966 | United Kingdom | GBR | Europe |
121846 | Human, Cerobrospinal fluid |
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Host | #Human | |
#Host Body Product | #Fluids | #Cerebrospinal fluid |
taxonmaps
- @ref: 69479
- File name: preview.99_95.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_8;96_11;97_38;98_86;99_95&stattab=map
- Last taxonomy: Acinetobacter
- 16S sequence: HQ180184
- Sequence Identity:
- Total samples: 46266
- soil counts: 7889
- aquatic counts: 12125
- animal counts: 20278
- plant counts: 5974
Safety information
risk assessment
@ref | biosafety level | biosafety level comment |
---|---|---|
18064 | 2 | Risk group (German classification) |
121846 | 1 | Risk group (French classification) |
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
20218 | Acinetobacter genomosp. 3 strain LMG 1035 16S-23S ribosomal RNA intergenic spacer, complete sequence | AY601827 | 619 | ena | 48296 |
20218 | Acinetobacter genomosp. 3 strain CIP 70.29 16S ribosomal RNA gene, partial sequence | FJ694758 | 1533 | ena | 981326 |
20218 | Acinetobacter pittii genomic DNA containing 16S-23S IGS, strain ATCC 19004, clone 01 | HE651687 | 620 | ena | 981326 |
20218 | Acinetobacter pittii genomic DNA containing 16S-23S IGS, strain ATCC 19004, clone 02 | HE651688 | 620 | ena | 981326 |
20218 | Acinetobacter pittii genomic DNA containing 16S-23S IGS, strain ATCC 19004, clone 03 | HE651689 | 620 | ena | 981326 |
20218 | Acinetobacter pittii genomic DNA containing 16S-23S IGS, strain ATCC 19004, clone 04 | HE651690 | 620 | ena | 981326 |
20218 | Acinetobacter pittii genomic DNA containing 16S-23S IGS, strain ATCC 19004, clone 05 | HE651691 | 620 | ena | 981326 |
20218 | Acinetobacter pittii genomic DNA containing 16S-23S IGS, strain ATCC 19004, clone 08 | HE651692 | 620 | ena | 981326 |
20218 | Acinetobacter pittii genomic DNA containing 16S-23S IGS, strain ATCC 19004, clone 11 | HE651693 | 620 | ena | 981326 |
20218 | Acinetobacter pittii genomic DNA containing 16S-23S IGS, strain ATCC 19004, clone 12 | HE651694 | 620 | ena | 981326 |
20218 | Acinetobacter pittii genomic DNA containing 16S-23S IGS, strain ATCC 19004, clone 14 | HE651695 | 620 | ena | 981326 |
20218 | Acinetobacter pittii genomic DNA containing 16S-23S IGS, strain ATCC 19004, clone 15 | HE651696 | 620 | ena | 981326 |
20218 | Acinetobacter pittii 16S rRNA gene, strain ATCC 19004 | HE651911 | 1530 | ena | 981326 |
20218 | Acinetobacter ATCC19004 16S-23S ribosomal RNA intergenic spacer, including Ile-tRNA and Ala-tRNA genes | U60280 | 633 | ena | 981326 |
18064 | Acinetobacter pittii strain LMG 1035 16S ribosomal RNA gene, partial sequence | HQ180184 | 1392 | ena | 48296 |
Genome sequences
@ref | description | accession | assembly level | database | NCBI tax ID |
---|---|---|---|---|---|
66792 | Acinetobacter pittii DSM 25618 | GCA_000836015 | contig | ncbi | 48296 |
66792 | Acinetobacter pittii CIP 70.29 | 1217672.3 | wgs | patric | 1311774 |
66792 | Acinetobacter pittii strain DSM 25618 | 48296.27 | wgs | patric | 48296 |
66792 | Acinetobacter pittii strain FDAARGOS 1399 | 48296.505 | complete | patric | 48296 |
66792 | Acinetobacter pittii CIP 70.29 | 2537561555 | draft | img | 1311774 |
66792 | Acinetobacter pittii DSM 25618 | 2667527755 | draft | img | 48296 |
66792 | Acinetobacter pittii CIP70.29 | GCA_024390955 | contig | ncbi | 48296 |
66792 | Acinetobacter pittii ATCC 19004 = CIP 70.29 | GCA_000369045 | scaffold | ncbi | 1311774 |
Genome-based predictions
predictions
trait | prediction | confidence | training_data |
---|---|---|---|
gram-positive | no | 97.203 | no |
anaerobic | no | 98.655 | yes |
halophile | no | 90.487 | no |
spore-forming | no | 96.487 | no |
glucose-util | no | 74.95 | yes |
aerobic | yes | 95.779 | yes |
motile | no | 89.307 | no |
thermophile | no | 99.879 | no |
flagellated | no | 94.024 | no |
glucose-ferment | no | 84.061 | no |
External links
@ref: 18064
culture collection no.: CCUG 61664, NCDC KC739, DSM 25618, ATCC 19004, CIP 70.29, LMG 1035, NIPH 519, RUH 2206
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Phylogeny | 21320596 | Genotypic and phenotypic characterization of the Acinetobacter calcoaceticus-Acinetobacter baumannii complex with the proposal of Acinetobacter pittii sp. nov. (formerly Acinetobacter genomic species 3) and Acinetobacter nosocomialis sp. nov. (formerly Acinetobacter genomic species 13TU). | Nemec A, Krizova L, Maixnerova M, van der Reijden TJ, Deschaght P, Passet V, Vaneechoutte M, Brisse S, Dijkshoorn L | Res Microbiol | 10.1016/j.resmic.2011.02.006 | 2011 | Acinetobacter/*classification/*genetics/isolation & purification, Acinetobacter baumannii/classification/genetics/isolation & purification, DNA, Bacterial/genetics, Genotype, Molecular Sequence Data, Multilocus Sequence Typing, Phenotype, Phylogeny, RNA, Ribosomal, 16S/genetics | Genetics |
32582088 | Phenotypic Variation and Carbapenem Resistance Potential in OXA-499-Producing Acinetobacter pittii. | Zhang L, Fu Y, Han X, Xu Q, Weng S, Yan B, Liu L, Hua X, Chen Y, Yu Y | Front Microbiol | 10.3389/fmicb.2020.01134 | 2020 | |||
Phylogeny | 34633923 | Acinetobacter geminorum sp. nov., isolated from human throat swabs. | Wolf S, Barth-Jakschic E, Birkle K, Bader B, Marschal M, Liese J, Peter S, Oberhettinger P | Int J Syst Evol Microbiol | 10.1099/ijsem.0.005018 | 2021 | *Acinetobacter/classification/isolation & purification, Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Genes, Bacterial, Humans, Nucleic Acid Hybridization, *Pharynx/microbiology, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA | Pathogenicity |
Reference
@id | authors | catalogue | doi/url | title | journal | pubmed |
---|---|---|---|---|---|---|
18064 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 25618) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-25618 | |||
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
42143 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/10499 | ||||
62684 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 61664) | https://www.ccug.se/strain?id=61664 | |||
66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
68369 | Automatically annotated from API 20NE | |||||
68382 | Automatically annotated from API zym | |||||
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
121846 | Curators of the CIP | Collection of Institut Pasteur (CIP 70.29) | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2070.29 |