Strain identifier

BacDive ID: 8123

Type strain: Yes

Species: Acinetobacter towneri

Strain Designation: AB1110

Strain history: CIP <- 2002, P. Kämpfer, Giessen Univ., Giessen, Germany: strain AB1110

NCBI tax ID(s): 1120929 (strain), 202956 (species)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 2:
version 1:
version 8.1 (current version)

General

@ref: 5637

BacDive-ID: 8123

DSM-Number: 14962

keywords: genome sequence, 16S sequence, Bacteria, aerobe, mesophilic, Gram-negative, rod-shaped

description: Acinetobacter towneri AB1110 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from activated sludge.

NCBI tax id

NCBI tax idMatching level
202956species
1120929strain

strain history

@refhistory
5637<- P. Kämpfer, University Giessen, Germany; AB1110 <- A. Beacham
421272002, P. Kämpfer, Univ., Giessen, Germany: strain AB1110
123567CIP <- 2002, P. Kämpfer, Giessen Univ., Giessen, Germany: strain AB1110

doi: 10.13145/bacdive8123.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Moraxellaceae
  • genus: Acinetobacter
  • species: Acinetobacter towneri
  • full scientific name: Acinetobacter towneri Carr et al. 2003

@ref: 5637

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Moraxellaceae

genus: Acinetobacter

species: Acinetobacter towneri

full scientific name: Acinetobacter towneri Carr et al. 2003

strain designation: AB1110

type strain: yes

Morphology

cell morphology

  • @ref: 123567
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: no

colony morphology

  • @ref: 123567

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
5637CASO AGAR (MERCK 105458) (DSMZ Medium 220)yeshttps://mediadive.dsmz.de/medium/220Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water
5637TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)yeshttps://mediadive.dsmz.de/medium/535Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
42127MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
123567CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperaturerange
5637positivegrowth30mesophilic
42127positivegrowth30mesophilic
58982positivegrowth30mesophilic
123567positivegrowth25-41
123567nogrowth10psychrophilic
123567nogrowth45thermophilic

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
58982aerobe
123567obligate aerobe

halophily

@refsaltgrowthtested relationconcentration
123567NaClpositivegrowth0-2 %
123567NaClnogrowth4 %
123567NaClnogrowth6 %
123567NaClnogrowth8 %
123567NaClnogrowth10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate-assimilation
6836917128adipate-assimilation
6836924265gluconate-assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose-assimilation
6836917634D-glucose-assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836917634D-glucose-fermentation
6836927897tryptophan-energy source
6836917632nitrate-reduction
12356717632nitrate-reduction
12356716301nitrite-reduction
12356717234glucose-degradation
12356717632nitrate-respiration

antibiotic resistance

  • @ref: 123567
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

@refChebi-IDmetaboliteproduction
6836935581indoleno
12356735581indoleno

metabolite tests

@refChebi-IDmetaboliteindole testvoges-proskauer-testmethylred-test
6836935581indole-
12356715688acetoin-
12356717234glucose-

enzymes

@refvalueactivityec
5637catalase+1.11.1.6
5637cytochrome-c oxidase-1.9.3.1
68369cytochrome oxidase-1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6
123567beta-galactosidase-3.2.1.23
123567gelatinase-
123567gamma-glutamyltransferase-2.3.2.2
123567urease-3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)+
68382leucine arylamidase+3.4.11.1
68382valine arylamidase-
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
123567-+++++----++--------

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
5637---------------+--+--
5637---------------------

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
123567+------------------------------------------------------------------++------++--++---------+-----+--

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinentsampling dateisolation date
5637activated sludgeBendigoAustraliaAUSAustralia and Oceania
58982Bendigo waste water treatment plantVictoriaAustraliaAUSAustralia and Oceania1988
123567Environment, Bendigo waste water treatment plantVictoriaAustraliaAUSAustralia and Oceania1988

isolation source categories

  • Cat1: #Engineered
  • Cat2: #Waste
  • Cat3: #Activated sludge

taxonmaps

  • @ref: 69479
  • File name: preview.99_36454.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_8;96_17419;97_21426;98_26871;99_36454&stattab=map
  • Last taxonomy: Acinetobacter
  • 16S sequence: AF509823
  • Sequence Identity:
  • Total samples: 45
  • soil counts: 4
  • aquatic counts: 20
  • animal counts: 20
  • plant counts: 1

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
56371Risk group (German classification)
1235671Risk group (French classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Acinetobacter towneri strain DSM14962 16S ribosomal RNA gene, partial sequenceEF611416453ena202956
5637Acinetobacter towneri strain AB1110 16S ribosomal RNA gene, partial sequenceAF5098231325ena202956

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Acinetobacter towneri DSM 14962 = CIP 107472GCA_000368785scaffoldncbi1120929
66792Acinetobacter towneri DSM 14962 = CIP 107472GCA_000688495contigncbi1120929
66792Acinetobacter towneri DSM 14962 = CIP 1074721120929.6wgspatric1120929
66792Acinetobacter towneri DSM 14962 = CIP 1074721120929.3wgspatric1120929
66792Acinetobacter towneri DSM 149622565956698draftimg1120929
66792Acinetobacter towneri DSM 149622556921621draftimg1120929

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
motileno88.774no
flagellatedno95.095no
gram-positiveno97.613no
anaerobicno96.479yes
aerobicyes90.747no
halophileno85.389no
spore-formingno96.591no
glucose-utilno92.664no
thermophileno99.873no
glucose-fermentno92.073no

External links

@ref: 5637

culture collection no.: DSM 14962, CIP 107472, CCUG 50769, CCM 7201

straininfo link

  • @ref: 77530
  • straininfo: 113563

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Phylogeny12892111Seven novel species of Acinetobacter isolated from activated sludge.Carr EL, Kampfer P, Patel BKC, Gurtler V, Seviour RJInt J Syst Evol Microbiol10.1099/ijs.0.02486-02003Acinetobacter/*classification/genetics/*isolation & purification, Base Sequence, DNA, Bacterial/genetics, DNA, Ribosomal/genetics, In Situ Hybridization, Fluorescence, Molecular Sequence Data, Phenotype, Phylogeny, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Sewage/*microbiology, Terminology as Topic, VictoriaGenetics
Phylogeny18092456Acinetobacter marinus sp. nov. and Acinetobacter seohaensis sp. nov., isolated from sea water of the Yellow Sea in Korea.Yoon JH, Kim IG, Oh TKJ Microbiol Biotechnol2007Acinetobacter/classification/genetics/*isolation & purification, Nucleic Acid Hybridization, Phenotype, Phylogeny, RNA, Ribosomal, 16S, Seawater/*microbiologyPhenotype

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
5637Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 14962)https://www.dsmz.de/collection/catalogue/details/culture/DSM-14962
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
42127Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/4911
58982Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 50769)https://www.ccug.se/strain?id=50769
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
77530Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID113563.1StrainInfo: A central database for resolving microbial strain identifiers
123567Curators of the CIPCollection of Institut Pasteur (CIP 107472)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20107472