Strain identifier

BacDive ID: 8094

Type strain: No

Species: Acinetobacter baumannii

Strain Designation: 2197, Biol. 1

Strain history: <- ATCC <- NCTC <- I.G. Schaub; Biol. 1

NCBI tax ID(s): 470 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 2:
version 1:
version 8.1 (current version)

General

@ref: 9085

BacDive-ID: 8094

DSM-Number: 30008

keywords: 16S sequence, Bacteria, mesophilic, antibiotic resistance

description: Acinetobacter baumannii 2197 is a mesophilic bacterium that has multiple antibiotic resistances.

NCBI tax id

  • NCBI tax id: 470
  • Matching level: species

strain history

  • @ref: 9085
  • history: <- ATCC <- NCTC <- I.G. Schaub; Biol. 1

doi: 10.13145/bacdive8094.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Moraxellaceae
  • genus: Acinetobacter
  • species: Acinetobacter baumannii
  • full scientific name: Acinetobacter baumannii Bouvet and Grimont 1986

@ref: 9085

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Moraxellaceae

genus: Acinetobacter

species: Acinetobacter baumannii

full scientific name: Acinetobacter baumannii Bouvet and Grimont 1986

strain designation: 2197, Biol. 1

type strain: no

Morphology

colony morphology

  • @ref: 9085
  • type of hemolysis: gamma
  • incubation period: 1-2 days

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
9085CASO AGAR (MERCK 105458) (DSMZ Medium 220)yeshttps://mediadive.dsmz.de/medium/220Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water
9085NUTRIENT AGAR (DSMZ Medium 1)yeshttps://mediadive.dsmz.de/medium/1Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

culture temp

  • @ref: 9085
  • growth: positive
  • type: growth
  • temperature: 30
  • range: mesophilic

Physiology and metabolism

antibiogram

@refmediumincubation temperatureincubation timeoxygen conditionPenicillin Goxacillinampicillinticarcillinmezlocillincefalotincefazolincefotaximeaztreonamimipenemtetracyclinechloramphenicolgentamycinamikacinvancomycinerythromycinlincomycinofloxacinnorfloxacincolistinpipemidic acidnitrofurantoinbacitracinpolymyxin bkanamycinneomycindoxycyclineceftriaxoneclindamycinfosfomycinmoxifloxacinlinezolidnystatinquinupristin/dalfopristinteicoplaninpiperacillin/tazobactam
9085Mueller-Hinton Agar301aerob00024-26120010-121434-3624-2602020-22018-2003024-26161080162218-203012816-1834000024
9085Mueller-Hinton Agar000241000121234241422240200302414100016222028-301201232-34000024
9085Mueller-Hinton Agar37000168001012241410140010018161260012181616n.d.n.d.n.d.n.d.n.d.n.d.n.d.n.d.n.d.

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate+assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose+assimilation
6836917634D-glucose+assimilation
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836927897tryptophan-energy source
6836917632nitrate-reduction

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
9085catalase+1.11.1.6
9085cytochrome-c oxidase-1.9.3.1
68369cytochrome oxidase-1.9.3.1
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
9085--+---+/--++----++++++
9085--------++----++++++-
9085--------++----++++++-

Isolation, sampling and environmental information

taxonmaps

  • @ref: 69479
  • File name: preview.99_14.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_8;96_11;97_11;98_13;99_14&stattab=map
  • Last taxonomy: Acinetobacter baumannii
  • 16S sequence: X81667
  • Sequence Identity:
  • Total samples: 10225
  • soil counts: 605
  • aquatic counts: 4013
  • animal counts: 5073
  • plant counts: 534

Safety information

risk assessment

  • @ref: 9085
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Acinetobacter baumannii strain ATCC 15308 16S ribosomal RNA gene, partial sequenceFJ971866792ena470
20218Acinetobacter baumanii 16S ribosomal RNA gene, complete sequenceU108741528ena470
9085A.baumannii 16S rRNA gene (DSM30008)X816671459ena470

GC content

  • @ref: 9085
  • GC-content: 42.1

External links

@ref: 9085

culture collection no.: DSM 30008, ATCC 15308, CCM 5593, CIP 64.8, NCTC 7844, CCUG 33549

straininfo link

  • @ref: 77521
  • straininfo: 163

literature

topicPubmed-IDtitleauthorsjournalDOIyearmesh
Pathogenicity31804978From bugs to drugs: Combating antimicrobial resistance by discovering novel antibiotics.Abou Fayad A, Itani D, Miari M, Tanelian A, Iweir S, Matar GMJ Infect Dev Ctries10.3855/jidc.101082018
Pathogenicity34097495Diversity of Sequence Types and Impact of Fitness Cost among Carbapenem-Resistant Acinetobacter baumannii Isolates from Tripoli, Libya.Abou Fayad AG, Haraoui LP, Sleiman A, Jaafar M, Zorgani A, Matar GM, Higgins PGAntimicrob Agents Chemother10.1128/AAC.00277-212021*Acinetobacter Infections/drug therapy/epidemiology, *Acinetobacter baumannii/genetics, Anti-Bacterial Agents/pharmacology, Bacterial Proteins/genetics, Carbapenems/pharmacology, Humans, Libya/epidemiology, Microbial Sensitivity Tests, Multilocus Sequence Typing, beta-Lactamases/genetics

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
9085Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 30008)https://www.dsmz.de/collection/catalogue/details/culture/DSM-30008
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
68369Automatically annotated from API 20NE
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
77521Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID163.1StrainInfo: A central database for resolving microbial strain identifiers