Strain identifier

BacDive ID: 8068

Type strain: No

Species: Acinetobacter sp.

Strain Designation: BD 413 ivl-10

Strain history: CIP <- 1994, P.J.M. Bouvet, Inst. Pasteur, Paris, France <- E. Juni: strain BD 413, trpE27 <- I.P. Crawford

NCBI tax ID(s): 68992 (species)

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General

@ref: 304

BacDive-ID: 8068

DSM-Number: 587

keywords: 16S sequence, Bacteria, obligate aerobe, Gram-negative, rod-shaped

description: Acinetobacter sp. BD 413 ivl-10 is an obligate aerobe, Gram-negative, rod-shaped bacterium of the family Moraxellaceae.

NCBI tax id

  • NCBI tax id: 68992
  • Matching level: species

strain history

@refhistory
304<- H.G. Schlegel <- E. Juni; BD 413 ivl-10
122684CIP <- 1994, P.J.M. Bouvet, Inst. Pasteur, Paris, France <- E. Juni: strain BD 413, trpE27 <- I.P. Crawford

doi: 10.13145/bacdive8068.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Moraxellaceae
  • genus: Acinetobacter
  • species: Acinetobacter sp.
  • full scientific name: Acinetobacter Brisou and Prévot 1954 (Approved Lists 1980)

@ref: 304

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Moraxellaceae

genus: Acinetobacter

species: Acinetobacter sp.

full scientific name: Acinetobacter sp.

strain designation: BD 413 ivl-10

type strain: no

Morphology

cell morphology

  • @ref: 122684
  • gram stain: negative
  • cell shape: rod-shaped
  • motility: no

colony morphology

  • @ref: 122684

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
304TRYPTICASE PHYTONE MEDIUM (DSMZ Medium 75)yeshttps://mediadive.dsmz.de/medium/75Name: TRYPTICASE PHYTONE MEDIUM (DSMZ Medium 75) Composition: Trypticase peptone 17.0 g/l NaCl 5.0 g/l Phytone peptone 3.0 g/l Glucose 2.5 g/l K2HPO4 2.5 g/l Distilled water
122684CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperature
304positivegrowth30
122684positivegrowth10-37
122684nogrowth41
122684nogrowth45

Physiology and metabolism

oxygen tolerance

  • @ref: 122684
  • oxygen tolerance: obligate aerobe

halophily

@refsaltgrowthtested relationconcentration
122684NaClpositivegrowth0-4 %
122684NaClnogrowth6 %
122684NaClnogrowth8 %
122684NaClnogrowth10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836924265gluconate-assimilation
6836917306maltose-assimilation
6836959640N-acetylglucosamine-assimilation
6836916899D-mannitol-assimilation
6836916024D-mannose-assimilation
6836930849L-arabinose-assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea+hydrolysis
6836929016arginine-hydrolysis
6836927897tryptophan-energy source
6836917632nitrate-reduction
12268416947citrate-carbon source
12268417632nitrate-reduction
12268416301nitrite-reduction
12268417234glucose+/-degradation
12268417632nitrate-respiration

antibiotic resistance

  • @ref: 122684
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

@refChebi-IDmetaboliteproduction
6836935581indoleno
12268435581indoleno

metabolite tests

@refChebi-IDmetaboliteindole testvoges-proskauer-testmethylred-test
6836935581indole-
12268415688acetoin-
12268417234glucose-

enzymes

@refvalueactivityec
68369cytochrome oxidase-1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21
68369urease+3.5.1.5
68369arginine dihydrolase-3.5.3.6
122684oxidase-
122684beta-galactosidase-3.2.1.23
122684gelatinase-
122684catalase+1.11.1.6
122684gamma-glutamyltransferase+2.3.2.2
122684urease+3.5.1.5
68382alkaline phosphatase+3.1.3.1
68382esterase (C 4)+
68382esterase lipase (C 8)+
68382lipase (C 14)+
68382leucine arylamidase+3.4.11.1
68382valine arylamidase+
68382cystine arylamidase-3.4.11.3
68382trypsin-3.4.21.4
68382alpha-chymotrypsin-3.4.21.1
68382acid phosphatase+3.1.3.2
68382naphthol-AS-BI-phosphohydrolase+
68382alpha-galactosidase-3.2.1.22
68382beta-galactosidase-3.2.1.23
68382beta-glucuronidase-3.2.1.31
68382alpha-glucosidase-3.2.1.20
68382beta-glucosidase-3.2.1.21
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382alpha-mannosidase-3.2.1.24
68382alpha-fucosidase-3.2.1.51

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
122684-++++++---++--------

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
304----+---+------++++--
304--+-+----------------

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
122684+-------------+----+--------+----------+---++----+++++------+-+++-----+--+-+-+-++---+---++++++-++-+

Isolation, sampling and environmental information

taxonmaps

  • @ref: 69479
  • File name: preview.99_4388.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_8;96_11;97_1467;98_1789;99_4388&stattab=map
  • Last taxonomy: Acinetobacter
  • 16S sequence: X89709
  • Sequence Identity:
  • Total samples: 1880
  • soil counts: 84
  • aquatic counts: 787
  • animal counts: 727
  • plant counts: 282

Safety information

risk assessment

  • @ref: 122684
  • biosafety level: 1
  • biosafety level comment: Risk group (French classification)

Sequence information

16S sequences

  • @ref: 20218
  • description: Acinetobacter sp. DNA for 16S ribosomal RNA
  • accession: X89709
  • length: 1458
  • database: nuccore
  • NCBI tax ID: 472

External links

@ref: 304

culture collection no.: DSM 587, ATCC 33308, CIP 104004

straininfo link

  • @ref: 77496
  • straininfo: 45952

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Genetics8930906System to study horizontal gene exchange among microorganisms without cultivation of recipients.Stratz M, Mau M, Timmis KNMol Microbiol10.1046/j.1365-2958.1996.00099.x1996Acinetobacter/*genetics, Bacillus subtilis/genetics, Gene Transfer, Horizontal, Genetic Markers, Molecular Sequence Data, Polymerase Chain Reaction, RNA, Bacterial/genetics, RNA, Ribosomal, 23S/*genetics, *Recombination, Genetic, *Transformation, Bacterial, *rRNA OperonCultivation
Genetics11976746Evaluation of non-cyanobacterial genome sequences for occurrence of genes encoding proteins homologous to cyanophycin synthetase and cloning of an active cyanophycin synthetase from Acinetobacter sp. strain DSM 587.Krehenbrink M, Oppermann-Sanio FB, Steinbuchel AArch Microbiol10.1007/s00203-001-0396-92002Acinetobacter/chemistry/classification/*enzymology/*genetics, Amino Acid Sequence, *Bacterial Proteins, Cloning, Molecular, Databases, Genetic, Escherichia coli/enzymology/genetics, Gene Expression, Genes, Bacterial/genetics, *Genome, Bacterial, Molecular Sequence Data, Open Reading Frames/genetics, Peptide Synthases/chemistry/*genetics, Phylogeny, Plant Proteins/isolation & purification/metabolism, Sequence Homology, Amino AcidEnzymology

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
304Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 587)https://www.dsmz.de/collection/catalogue/details/culture/DSM-587
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
77496Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID45952.1StrainInfo: A central database for resolving microbial strain identifiers
122684Curators of the CIPCollection of Institut Pasteur (CIP 104004)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20104004