Strain identifier
BacDive ID: 8040
Type strain: 
Species: Luedemannella helvata
Strain Designation: 3-9(24)
Strain history: I. Ara 3-9(24).
NCBI tax ID(s): 349315 (species)
version 8.1 (current version)
General
@ref: 15464
BacDive-ID: 8040
DSM-Number: 45173
keywords: 16S sequence, Bacteria, mesophilic
description: Luedemannella helvata 3-9 is a mesophilic bacterium that was isolated from soil.
NCBI tax id
- NCBI tax id: 349315
- Matching level: species
strain history
| @ref | history |
|---|---|
| 15464 | <- JCM/RIKEN <- I. Ara; 3-9(24) |
| 67770 | I. Ara 3-9(24). |
doi: 10.13145/bacdive8040.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Micromonosporales
- family: Micromonosporaceae
- genus: Luedemannella
- species: Luedemannella helvata
- full scientific name: Luedemannella helvata Ara and Kudo 2007
@ref: 15464
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Micromonosporaceae
genus: Luedemannella
species: Luedemannella helvata
full scientific name: Luedemannella helvata Ara and Kudo 2007
strain designation: 3-9(24)
type strain: yes
Morphology
multimedia
- @ref: 15464
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_45173.jpg
- caption: Medium 65 28°C
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 15464 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
| 15464 | GPHF-MEDIUM (DSMZ Medium 553) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium553.pdf | |
| 15464 | YEAST-STARCH-AGAR(B) (DSMZ Medium 656) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium656.pdf |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 15464 | positive | growth | 28 | mesophilic |
| 67770 | positive | growth | 28 | mesophilic |
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: MK-9(H6), MK-9(H4)
Isolation, sampling and environmental information
isolation
| @ref | sample type | country | origin.country | continent |
|---|---|---|---|---|
| 15464 | soil | Bangladesh | BGD | Asia |
| 67770 | Sandy soil | Bangladesh | BGD | Asia |
isolation source categories
- Cat1: #Environmental
- Cat2: #Terrestrial
- Cat3: #Soil
Safety information
risk assessment
- @ref: 15464
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 15464
- description: Luedemannella helvata gene for 16S rRNA, partial sequence, strain:3-9(24)
- accession: AB236957
- length: 1500
- database: ena
- NCBI tax ID: 349315
GC content
| @ref | GC-content | method |
|---|---|---|
| 15464 | 71 | |
| 67770 | 71 | high performance liquid chromatography (HPLC) |
External links
@ref: 15464
culture collection no.: DSM 45173, BCC 42265, JCM 13249, MTCC 8091, TBRC 146
straininfo link
- @ref: 77468
- straininfo: 309465
literature
- topic: Phylogeny
- Pubmed-ID: 17429160
- title: Luedemannella gen. nov., a new member of the family Micromonosporaceae and description of Luedemannella helvata sp. nov. and Luedemannella flava sp. nov.
- authors: Ara I, Kudo T
- journal: J Gen Appl Microbiol
- DOI: 10.2323/jgam.53.39
- year: 2007
- mesh: Base Sequence, Micromonosporaceae/*classification/genetics/metabolism, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics
- topic2: Genetics
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 15464 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 45173) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-45173 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
| 77468 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID309465.1 | StrainInfo: A central database for resolving microbial strain identifiers |