Strain identifier
BacDive ID: 8032
Type strain: 
Species: Micromonospora maris
Strain Designation: AB-18-032
Culture col. no.: DSM 45365, DSM 15899, JCM 31040, NBRC 109089, NRRL B-24793
General
@ref: 16364
BacDive-ID: 8032
DSM-Number: 45365
keywords: Bacteria, 16S sequence, genome sequence, mesophilic
description: Micromonospora maris AB-18-032 is a mesophilic bacterium that was isolated from deep-sea sediment.
strain history: <- H.-P. Fiedler, Univ. Tübingen; AB-18-032 <- M. Goodfellow <- A. T. Bull
doi: 10.13145/bacdive8032.20201210.5
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinobacteria
- domain: Bacteria
- phylum: Actinobacteria
- class: Actinobacteria
- order: Micromonosporales
- family: Micromonosporaceae
- genus: Micromonospora
- species: Micromonospora maris
- full scientific name: Micromonospora maris (Goodfellow et al. 2012) Nouioui et al. 2018
synonyms
- @ref: 20215
- synonym: Verrucosispora maris
@ref: 16364
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Micromonosporaceae
genus: Micromonospora
species: Micromonospora maris
full scientific name: Micromonospora maris (Goodfellow et al. 2012) Nouioui et al. 2018
strain designation: AB-18-032
type strain: yes
Morphology
multimedia
- @ref: 16364
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_45365.jpg
- caption: Medium 65 28°C
- license or copyright: (C) Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
- @ref: 16364
- name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
- growth: yes
- link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium65.pdf
culture temp
- @ref: 16364
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Physiology and metabolism
compound production
| @ref | compound |
|---|---|
| 16364 | abyssomicins |
| 16364 | proximicin A |
Isolation, sampling and environmental information
isolation
- @ref: 16364
- sample type: deep-sea sediment
- geographic location: Sea of Japan (-289m)
- country: Japan
- origin.country: JPN
- continent: Asia
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Aquatic | #Marine |
| #Environmental | #Aquatic | #Sediment |
Safety information
risk assessment
- @ref: 16364
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 16364
- description: Verrucosispora maris AB-18-032 16S ribosomal RNA gene, partial sequence
- accession: AY528866
- length: 1440
- database: ena
- NCBI tax ID: 263358
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Verrucosispora maris NRRL B-24793 | GCA_001507315 | contig | ncbi | 1003110 |
| 66792 | Verrucosispora maris strain NRRL B-24793 | 1003110.4 | wgs | patric | 1003110 |
GC content
| @ref | GC-content | method |
|---|---|---|
| 16364 | 70.9 | sequence analysis |
| 16364 | 69.5 | fluorimetric |
External links
@ref: 16364
culture collection no.: DSM 45365, DSM 15899, JCM 31040, NBRC 109089, NRRL B-24793
straininfo link
| @ref | passport |
|---|---|
| 20218 | http://www.straininfo.net/strains/869495 |
| 20218 | http://www.straininfo.net/strains/869496 |
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 16364 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 45365) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-45365 | |||
| 20215 | D.Gleim, M.Kracht, N.Weiss et. al. | http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.html | Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) |