Strain identifier

BacDive ID: 8032

Type strain: Yes

Species: Micromonospora maris

Strain Designation: AB-18-032

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 16364

BacDive-ID: 8032

DSM-Number: 45365

keywords: Bacteria, 16S sequence, genome sequence, mesophilic

description: Micromonospora maris AB-18-032 is a mesophilic bacterium that was isolated from deep-sea sediment.

strain history: <- H.-P. Fiedler, Univ. Tübingen; AB-18-032 <- M. Goodfellow <- A. T. Bull

doi: 10.13145/bacdive8032.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinobacteria
  • domain: Bacteria
  • phylum: Actinobacteria
  • class: Actinobacteria
  • order: Micromonosporales
  • family: Micromonosporaceae
  • genus: Micromonospora
  • species: Micromonospora maris
  • full scientific name: Micromonospora maris (Goodfellow et al. 2012) Nouioui et al. 2018
  • synonyms

    • @ref: 20215
    • synonym: Verrucosispora maris

@ref: 16364

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Micromonosporaceae

genus: Micromonospora

species: Micromonospora maris

full scientific name: Micromonospora maris (Goodfellow et al. 2012) Nouioui et al. 2018

strain designation: AB-18-032

type strain: yes

Morphology

multimedia

  • @ref: 16364
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_45365.jpg
  • caption: Medium 65 28°C
  • license or copyright: (C) Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

  • @ref: 16364
  • name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
  • growth: yes
  • link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium65.pdf

culture temp

  • @ref: 16364
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Physiology and metabolism

compound production

@refcompound
16364abyssomicins
16364proximicin A

Isolation, sampling and environmental information

isolation

  • @ref: 16364
  • sample type: deep-sea sediment
  • geographic location: Sea of Japan (-289m)
  • country: Japan
  • origin.country: JPN
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Marine
#Environmental#Aquatic#Sediment

Safety information

risk assessment

  • @ref: 16364
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 16364
  • description: Verrucosispora maris AB-18-032 16S ribosomal RNA gene, partial sequence
  • accession: AY528866
  • length: 1440
  • database: ena
  • NCBI tax ID: 263358

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Verrucosispora maris NRRL B-24793GCA_001507315contigncbi1003110
66792Verrucosispora maris strain NRRL B-247931003110.4wgspatric1003110

GC content

@refGC-contentmethod
1636470.9sequence analysis
1636469.5fluorimetric

External links

@ref: 16364

culture collection no.: DSM 45365, DSM 15899, JCM 31040, NBRC 109089, NRRL B-24793

straininfo link

@refpassport
20218http://www.straininfo.net/strains/869495
20218http://www.straininfo.net/strains/869496

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
16364Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 45365)https://www.dsmz.de/collection/catalogue/details/culture/DSM-45365
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)