Strain identifier
BacDive ID: 7958
Type strain: 
Species: Micromonospora sp.
Strain history: <- M. E. Trujillo; LUPAC 12
NCBI tax ID(s): 285677 (species)
version 8.1 (current version)
General
@ref: 12159
BacDive-ID: 7958
DSM-Number: 44872
keywords: 16S sequence, Bacteria, mesophilic
description: Micromonospora sp. DSM 44872 is a mesophilic bacterium that was isolated from root nodules of Lupinus angustifolius.
NCBI tax id
- NCBI tax id: 285677
- Matching level: species
strain history
- @ref: 12159
- history: <- M. E. Trujillo; LUPAC 12
doi: 10.13145/bacdive7958.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Micromonosporales
- family: Micromonosporaceae
- genus: Micromonospora
- species: Micromonospora sp.
- full scientific name: Micromonospora Ørskov 1923 (Approved Lists 1980)
synonyms
@ref synonym 20215 Verrucosispora 20215 Xiangella 20215 Jishengella
@ref: 12159
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Micromonosporaceae
genus: Micromonospora
species: Micromonospora sp.
full scientific name: Micromonospora sp.
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 12159 | N-Z-AMINE-MEDIUM (DSMZ Medium 554) | yes | https://mediadive.dsmz.de/medium/554 | Name: N-Z-AMINE-MEDIUM (DSMZ Medium 554) Composition: Starch 20.0 g/l Agar 20.0 g/l Glucose 10.0 g/l N-Z amine 5.0 g/l Yeast extract 5.0 g/l CaCO3 1.0 g/l Distilled water |
| 12159 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium65.pdf |
culture temp
- @ref: 12159
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 12159
- sample type: root nodules of Lupinus angustifolius
- host species: Lupinus angustifolius
- geographic location: Salamanca
- country: Spain
- origin.country: ESP
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Plants | #Herbaceous plants (Grass,Crops) |
| #Host Body-Site | #Plant | #Root nodule |
taxonmaps
- @ref: 69479
- File name: preview.99_3471.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_94;96_404;97_1111;98_1509;99_3471&stattab=map
- Last taxonomy: Micromonospora
- 16S sequence: AJ783994
- Sequence Identity:
- Total samples: 1419
- soil counts: 1017
- aquatic counts: 161
- animal counts: 219
- plant counts: 22
Sequence information
16S sequences
- @ref: 12159
- description: Micromonospora sp. lupac 12 partial 16S rRNA gene
- accession: AJ783994
- length: 1510
- database: ena
- NCBI tax ID: 285677
External links
@ref: 12159
culture collection no.: DSM 44872, LUPAC 12
straininfo link
- @ref: 77392
- straininfo: 297446
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 12159 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 44872) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-44872 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
| 77392 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID297446.1 | StrainInfo: A central database for resolving microbial strain identifiers |