Strain identifier

BacDive ID: 7957

Type strain: No

Species: Micromonospora sp.

Strain history: <- M. E. Trujillo; LUPAC 5B

NCBI tax ID(s): 285672 (species)

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General

@ref: 12154

BacDive-ID: 7957

DSM-Number: 44867

keywords: 16S sequence, Bacteria, mesophilic

description: Micromonospora sp. DSM 44867 is a mesophilic bacterium that was isolated from root nodules of Lupinus angustifolius.

NCBI tax id

  • NCBI tax id: 285672
  • Matching level: species

strain history

  • @ref: 12154
  • history: <- M. E. Trujillo; LUPAC 5B

doi: 10.13145/bacdive7957.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micromonosporales
  • family: Micromonosporaceae
  • genus: Micromonospora
  • species: Micromonospora sp.
  • full scientific name: Micromonospora Ørskov 1923 (Approved Lists 1980)
  • synonyms

    @refsynonym
    20215Verrucosispora
    20215Xiangella
    20215Jishengella

@ref: 12154

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Micromonosporaceae

genus: Micromonospora

species: Micromonospora sp.

full scientific name: Micromonospora sp.

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
12154N-Z-AMINE-MEDIUM (DSMZ Medium 554)yeshttps://mediadive.dsmz.de/medium/554Name: N-Z-AMINE-MEDIUM (DSMZ Medium 554) Composition: Starch 20.0 g/l Agar 20.0 g/l Glucose 10.0 g/l N-Z amine 5.0 g/l Yeast extract 5.0 g/l CaCO3 1.0 g/l Distilled water
12154SPORULATION-AGAR (SA) (DSMZ Medium 555)yeshttps://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium555.pdf

culture temp

  • @ref: 12154
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 12154
  • sample type: root nodules of Lupinus angustifolius
  • host species: Lupinus angustifolius
  • geographic location: Salamanca
  • country: Spain
  • origin.country: ESP
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Plants#Herbaceous plants (Grass,Crops)
#Host Body-Site#Plant#Root nodule

taxonmaps

  • @ref: 69479
  • File name: preview.99_3471.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_94;96_404;97_1111;98_1509;99_3471&stattab=map
  • Last taxonomy: Micromonospora
  • 16S sequence: AJ783989
  • Sequence Identity:
  • Total samples: 1419
  • soil counts: 1017
  • aquatic counts: 161
  • animal counts: 219
  • plant counts: 22

Sequence information

16S sequences

  • @ref: 12154
  • description: Micromonospora sp. lupac 5B partial 16S rRNA gene
  • accession: AJ783989
  • length: 1509
  • database: ena
  • NCBI tax ID: 285672

External links

@ref: 12154

culture collection no.: DSM 44867, LUPAC 5B

straininfo link

  • @ref: 77391
  • straininfo: 297442

Reference

@idauthorscataloguedoi/urltitle
12154Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 44867)https://www.dsmz.de/collection/catalogue/details/culture/DSM-44867
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
77391Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID297442.1StrainInfo: A central database for resolving microbial strain identifiers