Strain identifier

BacDive ID: 774

Type strain: No

Species: Bacillus pumilus

Strain Designation: FR2-S7Ac

Strain history: <- European Space Agency, Noordwijk, Netherlands; FR2-S7Ac <- P. Rettberg and S. Barczyk, DLR, Köln, Germany

NCBI tax ID(s): 1408 (species)

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General

@ref: 17054

BacDive-ID: 774

DSM-Number: 30679

keywords: 16S sequence, Bacteria, mesophilic, human pathogen

description: Bacillus pumilus FR2-S7Ac is a mesophilic human pathogen that was isolated from spacecraft-associated clean room class ISO 5, Herschel Space Observatory.

NCBI tax id

  • NCBI tax id: 1408
  • Matching level: species

strain history

  • @ref: 17054
  • history: <- European Space Agency, Noordwijk, Netherlands; FR2-S7Ac <- P. Rettberg and S. Barczyk, DLR, Köln, Germany

doi: 10.13145/bacdive774.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Bacillaceae
  • genus: Bacillus
  • species: Bacillus pumilus
  • full scientific name: Bacillus pumilus Meyer and Gottheil 1901 (Approved Lists 1980)

@ref: 17054

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Bacillaceae

genus: Bacillus

species: Bacillus pumilus

full scientific name: Bacillus pumilus Meyer and Gottheil 1901

strain designation: FR2-S7Ac

type strain: no

Morphology

multimedia

  • @ref: 17054
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_30679.jpg
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

  • @ref: 17054
  • name: CASO AGAR (MERCK 105458) (DSMZ Medium 220)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/220
  • composition: Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water

culture temp

  • @ref: 17054
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 17054
  • sample type: spacecraft-associated clean room class ISO 5, Herschel Space Observatory
  • geographic location: Friedrichshafen, European Aeronautic Defense and Space Company
  • country: Germany
  • origin.country: DEU
  • continent: Europe

isolation source categories

  • Cat1: #Engineered
  • Cat2: #Built environment
  • Cat3: #Clean room

taxonmaps

  • @ref: 69479
  • File name: preview.99_885.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_17;97_607;98_698;99_885&stattab=map
  • Last taxonomy: Bacillus
  • 16S sequence: FN395276
  • Sequence Identity:
  • Total samples: 20329
  • soil counts: 7187
  • aquatic counts: 3497
  • animal counts: 6743
  • plant counts: 2902

Safety information

risk assessment

  • @ref: 17054
  • pathogenicity human: yes, in single cases
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 17054
  • description: Bacillus pumilus partial 16S rRNA gene, strain FR-S7Ac
  • accession: FN395276
  • length: 1384
  • database: ena
  • NCBI tax ID: 1408

External links

@ref: 17054

culture collection no.: DSM 30679

straininfo link

  • @ref: 70448
  • straininfo: 407530

Reference

@idauthorscataloguedoi/urltitle
17054Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 30679)https://www.dsmz.de/collection/catalogue/details/culture/DSM-30679
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
70448Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID407530.1StrainInfo: A central database for resolving microbial strain identifiers